RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 MTMR14Q8NCE2 650 aa18.56■□□□□ 0.56
CBX3-203ENST00000409747 SSH1Q8WYL5 1049 aa18.56■□□□□ 0.56
CBX3-203ENST00000409747 KAZALD1Q96I82 304 aa18.56■□□□□ 0.56
CBX3-203ENST00000409747 ZBED3Q96IU2 234 aaPredicted RBP18.56■□□□□ 0.56
CBX3-203ENST00000409747 SCAF8Q9UPN6 1271 aaKnown RBP18.56■□□□□ 0.56
CBX3-203ENST00000409747 ECM29Q5VYK3 1845 aa18.56■□□□□ 0.56
CBX3-203ENST00000409747 AKAP11Q9UKA4 1901 aa18.55■□□□□ 0.56
CBX3-203ENST00000409747 CERS5Q8N5B7 392 aa18.55■□□□□ 0.56
CBX3-203ENST00000409747 BICC1Q9H694 974 aaKnown RBP18.55■□□□□ 0.56
CBX3-203ENST00000409747 MYO1BO43795 1136 aa18.54■□□□□ 0.56
CBX3-203ENST00000409747 PRAMEF18Q5VWM3 479 aa18.54■□□□□ 0.56
CBX3-203ENST00000409747 CT47B1P0C2W7 299 aaPredicted RBP18.53■□□□□ 0.56
CBX3-203ENST00000409747 ARMC9Q7Z3E5 817 aa18.53■□□□□ 0.56
CBX3-203ENST00000409747 SMC4Q9NTJ3 1288 aa18.53■□□□□ 0.56
CBX3-203ENST00000409747 PPP2R3BQ9Y5P8 575 aa18.53■□□□□ 0.56
CBX3-203ENST00000409747 FAM205AQ6ZU69 1335 aa18.53■□□□□ 0.56
CBX3-203ENST00000409747 ARAP2Q8WZ64 1704 aa18.53■□□□□ 0.56
CBX3-203ENST00000409747 F8W031 263 aaPredicted RBP18.52■□□□□ 0.56
CBX3-203ENST00000409747 HIBADHP31937 336 aaKnown RBP18.52■□□□□ 0.56
CBX3-203ENST00000409747 CSRNP1Q96S65 589 aa18.52■□□□□ 0.56
CBX3-203ENST00000409747 RNF186Q9NXI6 227 aa18.52■□□□□ 0.56
CBX3-203ENST00000409747 RIPOR2Q9Y4F9 1068 aa18.52■□□□□ 0.56
CBX3-203ENST00000409747 CASP8AP2Q9UKL3 1982 aa18.52■□□□□ 0.56
CBX3-203ENST00000409747 UBE2Q2LH0YL09 131 aa18.52■□□□□ 0.55
CBX3-203ENST00000409747 CCER2I3L3R5 266 aa18.52■□□□□ 0.55
CBX3-203ENST00000409747 CFAP100Q494V2 611 aa18.52■□□□□ 0.55
CBX3-203ENST00000409747 MOB2Q70IA6 237 aa18.52■□□□□ 0.55
CBX3-203ENST00000409747 ANKRD44Q8N8A2 993 aa18.52■□□□□ 0.55
CBX3-203ENST00000409747 TDRD7Q8NHU6 1098 aaKnown RBP18.52■□□□□ 0.55
CBX3-203ENST00000409747 PUS3Q9BZE2 481 aaKnown RBP18.52■□□□□ 0.55
CBX3-203ENST00000409747 SPDYE2BA6NHP3 402 aa18.51■□□□□ 0.55
CBX3-203ENST00000409747 TRPA1O75762 1119 aa18.51■□□□□ 0.55
CBX3-203ENST00000409747 SPDYE6P0CI01 402 aa18.51■□□□□ 0.55
CBX3-203ENST00000409747 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
CBX3-203ENST00000409747 VPS37DQ86XT2 251 aa18.51■□□□□ 0.55
CBX3-203ENST00000409747 DEFB129Q9H1M3 183 aa18.51■□□□□ 0.55
CBX3-203ENST00000409747 GYG1P46976 350 aa18.5■□□□□ 0.55
CBX3-203ENST00000409747 MFSD14BQ5SR56 506 aa18.5■□□□□ 0.55
CBX3-203ENST00000409747 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
CBX3-203ENST00000409747 USP44Q9H0E7 712 aa18.5■□□□□ 0.55
CBX3-203ENST00000409747 JAG2Q9Y219 1238 aa18.5■□□□□ 0.55
CBX3-203ENST00000409747 RBM5P52756 815 aaKnown RBP eCLIP18.49■□□□□ 0.55
CBX3-203ENST00000409747 CAVIN4Q5BKX8 364 aa18.49■□□□□ 0.55
CBX3-203ENST00000409747 TRMT2AQ8IZ69 625 aaKnown RBP18.49■□□□□ 0.55
CBX3-203ENST00000409747 FAM84BQ96KN1 310 aaPredicted RBP18.49■□□□□ 0.55
CBX3-203ENST00000409747 PDE8BO95263 885 aa18.49■□□□□ 0.55
CBX3-203ENST00000409747 MCOLN1Q9GZU1 580 aa18.49■□□□□ 0.55
CBX3-203ENST00000409747 SERPINA10Q9UK55 444 aa18.49■□□□□ 0.55
CBX3-203ENST00000409747 DGKZQ13574 1117 aa18.48■□□□□ 0.55
CBX3-203ENST00000409747 LRRC24Q50LG9 513 aa18.48■□□□□ 0.55
CBX3-203ENST00000409747 VEZTQ9HBM0 779 aa18.48■□□□□ 0.55
CBX3-203ENST00000409747 CLRN2A0PK11 232 aa18.47■□□□□ 0.55
CBX3-203ENST00000409747 PPP1R12BO60237 982 aaPredicted RBP18.47■□□□□ 0.55
CBX3-203ENST00000409747 SREBF2Q12772 1141 aa18.47■□□□□ 0.55
CBX3-203ENST00000409747 TNFAIP1Q13829 316 aa18.47■□□□□ 0.55
CBX3-203ENST00000409747 SUPT20HL1Q3ZLR7 823 aa18.47■□□□□ 0.55
CBX3-203ENST00000409747 PRMT6Q96LA8 375 aaPredicted RBP18.47■□□□□ 0.55
CBX3-203ENST00000409747 ANGEL1Q9UNK9 670 aaKnown RBP18.47■□□□□ 0.55
CBX3-203ENST00000409747 TTF2Q9UNY4 1162 aaKnown RBP18.47■□□□□ 0.55
CBX3-203ENST00000409747 KIF16BQ96L93 1317 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 CCDC85CA6NKD9 419 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
CBX3-203ENST00000409747 PRKG1Q13976 671 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 FBXO33Q7Z6M2 555 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 VGLL2Q8N8G2 317 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 TBC1D22AQ8WUA7 517 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 HDAC5Q9UQL6 1122 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 UNCXA6NJT0 531 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 PTPN12Q05209 780 aaKnown RBP18.46■□□□□ 0.55
CBX3-203ENST00000409747 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.55
CBX3-203ENST00000409747 MAP3K11Q16584 847 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 LDLRAD1Q5T700 205 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 API5Q9BZZ5 524 aaKnown RBP18.46■□□□□ 0.55
CBX3-203ENST00000409747 PCDHAC2Q9Y5I4 1007 aa18.46■□□□□ 0.55
CBX3-203ENST00000409747 IFIT1P09914 478 aaKnown RBP18.45■□□□□ 0.54
CBX3-203ENST00000409747 UBTFL1P0CB47 393 aaPredicted RBP18.45■□□□□ 0.54
CBX3-203ENST00000409747 TM4SF4P48230 202 aa18.44■□□□□ 0.54
CBX3-203ENST00000409747 SPDYE2Q495Y8 402 aa18.44■□□□□ 0.54
CBX3-203ENST00000409747 KLHDC4Q8TBB5 520 aa18.44■□□□□ 0.54
CBX3-203ENST00000409747 SSC5DA1L4H1 1573 aa18.44■□□□□ 0.54
CBX3-203ENST00000409747 FBXO3Q9UK99 471 aa18.43■□□□□ 0.54
CBX3-203ENST00000409747 NOB1Q9ULX3 412 aaKnown RBP18.43■□□□□ 0.54
CBX3-203ENST00000409747 EYA2O00167 538 aa18.43■□□□□ 0.54
CBX3-203ENST00000409747 CRKP46108 304 aa18.43■□□□□ 0.54
CBX3-203ENST00000409747 IREB2P48200 963 aaKnown RBP18.43■□□□□ 0.54
CBX3-203ENST00000409747 HDLBPQ00341 1268 aaKnown RBP18.43■□□□□ 0.54
CBX3-203ENST00000409747 CHAF1AQ13111 956 aaPredicted RBP18.43■□□□□ 0.54
CBX3-203ENST00000409747 RASA3Q14644 834 aa18.43■□□□□ 0.54
CBX3-203ENST00000409747 SPRYD7Q5W111 196 aa18.43■□□□□ 0.54
CBX3-203ENST00000409747 DZIP1LQ8IYY4 767 aaKnown RBP18.43■□□□□ 0.54
CBX3-203ENST00000409747 SLC5A1P13866 664 aa18.42■□□□□ 0.54
CBX3-203ENST00000409747 RFX5P48382 616 aaPredicted RBP18.42■□□□□ 0.54
CBX3-203ENST00000409747 MKRN3Q13064 507 aaKnown RBP18.42■□□□□ 0.54
CBX3-203ENST00000409747 SLC10A4Q96EP9 437 aa18.42■□□□□ 0.54
CBX3-203ENST00000409747 ZNF70Q9UC06 446 aaPredicted RBP18.42■□□□□ 0.54
CBX3-203ENST00000409747 IQSEC3Q9UPP2 1182 aaPredicted RBP18.42■□□□□ 0.54
CBX3-203ENST00000409747 MAST3O60307 1309 aa18.41■□□□□ 0.54
CBX3-203ENST00000409747 ZBTB48P10074 688 aaPredicted RBP18.41■□□□□ 0.54
CBX3-203ENST00000409747 FGFR2P21802 821 aa18.41■□□□□ 0.54
CBX3-203ENST00000409747 TNNI2P48788 182 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms