RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 HLA-DOAP06340 250 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 FAM47AQ5JRC9 791 aa13.37□□□□□ -0.27
SNX13-202ENST00000409604 DENND2AQ9ULE3 1009 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 PDCP20941 246 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 ALDH1B1P30837 517 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 CMTR1Q8N1G2 835 aaKnown RBP13.36□□□□□ -0.27
SNX13-202ENST00000409604 COPRSQ9NQ92 184 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
SNX13-202ENST00000409604 IQSEC2Q5JU85 1478 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 PXDNQ92626 1479 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 MAP2P11137 1827 aaKnown RBP13.36□□□□□ -0.27
SNX13-202ENST00000409604 H7C1W4 665 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 ZFYP08048 801 aaPredicted RBP13.36□□□□□ -0.27
SNX13-202ENST00000409604 GJB2P29033 226 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 WTAPQ15007 396 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 HDAC9Q9UKV0 1011 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 PALD1Q9ULE6 856 aa13.36□□□□□ -0.27
SNX13-202ENST00000409604 CCDC171Q6TFL3 1326 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 TRAK2O60296 914 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 AK2P54819 239 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 PDIA6Q15084 440 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 CAMK4Q16566 473 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 KAT14Q9H8E8 782 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 METAP2P50579 478 aaKnown RBP eCLIP13.35□□□□□ -0.27
SNX13-202ENST00000409604 EIF5P55010 431 aaKnown RBP13.35□□□□□ -0.27
SNX13-202ENST00000409604 DYNLL1P63167 89 aaKnown RBP13.35□□□□□ -0.27
SNX13-202ENST00000409604 C8orf76Q96K31 380 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 UBR1Q8IWV7 1749 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 ARHGEF28Q8N1W1 1705 aaKnown RBP13.35□□□□□ -0.27
SNX13-202ENST00000409604 TCP10L2B9ZVM9 353 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 USP17L12C9JPN9 530 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 USP17L21D6R901 530 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 PRKAB2O43741 272 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 MCM5P33992 734 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 CATIPQ7Z7H3 387 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 USP26Q9BXU7 913 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 RNF41Q9H4P4 317 aaPredicted RBP13.35□□□□□ -0.27
SNX13-202ENST00000409604 MROH5Q6ZUA9 1318 aa13.35□□□□□ -0.27
SNX13-202ENST00000409604 PPEF1O14829 653 aaPredicted RBP13.34□□□□□ -0.27
SNX13-202ENST00000409604 OTUD7BQ6GQQ9 843 aa13.34□□□□□ -0.27
SNX13-202ENST00000409604 CABP5Q9NP86 173 aa13.34□□□□□ -0.27
SNX13-202ENST00000409604 CYP2D7A0A087X1C5 515 aa13.34□□□□□ -0.27
SNX13-202ENST00000409604 IFIT1BQ5T764 474 aaKnown RBP13.34□□□□□ -0.27
SNX13-202ENST00000409604 FAM173BQ6P4H8 233 aa13.34□□□□□ -0.27
SNX13-202ENST00000409604 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
SNX13-202ENST00000409604 NIM1KQ8IY84 436 aa13.34□□□□□ -0.27
SNX13-202ENST00000409604 CCDC34Q96HJ3 373 aa13.34□□□□□ -0.27
SNX13-202ENST00000409604 ERVV-1B6SEH8 477 aa13.33□□□□□ -0.27
SNX13-202ENST00000409604 PDE6AP16499 860 aa13.33□□□□□ -0.28
SNX13-202ENST00000409604 ZNF76P36508 570 aa13.33□□□□□ -0.28
SNX13-202ENST00000409604 IARSP41252 1262 aaKnown RBP13.33□□□□□ -0.28
SNX13-202ENST00000409604 APPBP2Q92624 585 aa13.33□□□□□ -0.28
SNX13-202ENST00000409604 ZNF287Q9HBT7 754 aa13.33□□□□□ -0.28
SNX13-202ENST00000409604 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.28
SNX13-202ENST00000409604 OVOS2A0A0G2JMS6 1433 aa13.33□□□□□ -0.28
SNX13-202ENST00000409604 SGSM2O43147 1006 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 GSTO1P78417 241 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 ZNF589Q86UQ0 364 aaPredicted RBP13.32□□□□□ -0.28
SNX13-202ENST00000409604 PDILTQ8N807 584 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 ESR2Q92731 530 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 SLC4A9Q96Q91 983 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 ATP5JP18859 108 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 NLRP5P59047 1200 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 BARGINQ6ZT62 677 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 ZBTB43O43298 467 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 CHAMP1Q96JM3 812 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 SPATA32Q96LK8 384 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 ZNF277Q9NRM2 450 aaPredicted RBP13.32□□□□□ -0.28
SNX13-202ENST00000409604 USP40Q9NVE5 1235 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 SEC63Q9UGP8 760 aaKnown RBP13.32□□□□□ -0.28
SNX13-202ENST00000409604 PLS1Q14651 629 aa13.32□□□□□ -0.28
SNX13-202ENST00000409604 WDR33Q9C0J8 1336 aaKnown RBP13.31□□□□□ -0.28
SNX13-202ENST00000409604 GOLGA6L19H0YKK7 550 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 RASGRF1Q13972 1273 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 SCARF1Q14162 830 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 ISM2Q6H9L7 571 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 FNBP4Q8N3X1 1017 aaPredicted RBP13.31□□□□□ -0.28
SNX13-202ENST00000409604 INCENPQ9NQS7 918 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 NRKQ7Z2Y5 1582 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 PRDX5P30044 214 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 ZSCAN31Q96LW9 406 aaPredicted RBP13.31□□□□□ -0.28
SNX13-202ENST00000409604 GPCPD1Q9NPB8 672 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 MED14O60244 1454 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 SLC27A2O14975 620 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 CAMTA2O94983 1202 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
SNX13-202ENST00000409604 INTS5Q6P9B9 1019 aaKnown RBP13.3□□□□□ -0.28
SNX13-202ENST00000409604 CNKSR1Q969H4 720 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 HMG20BQ9P0W2 317 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.3□□□□□ -0.28
SNX13-202ENST00000409604 KRT85P78386 507 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 DLGAP5Q15398 846 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 WDR66Q8TBY9 1149 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 ISCA1Q9BUE6 129 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 FAM196BA6NMK8 535 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 POTEAQ6S8J7 498 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 HEATR3Q7Z4Q2 680 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 MXD3Q9BW11 206 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 NCOA3Q9Y6Q9 1424 aa13.3□□□□□ -0.28
SNX13-202ENST00000409604 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms