RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 SLC27A2O14975 620 aa16.87■□□□□ 0.29
GPNMB-203ENST00000409458 ST18O60284 1047 aa16.87■□□□□ 0.29
GPNMB-203ENST00000409458 NPR1P16066 1061 aa16.87■□□□□ 0.29
GPNMB-203ENST00000409458 PUS7LQ9H0K6 701 aaKnown RBP16.87■□□□□ 0.29
GPNMB-203ENST00000409458 ZNF532Q9HCE3 1301 aa16.86■□□□□ 0.29
GPNMB-203ENST00000409458 HIBADHP31937 336 aaKnown RBP16.86■□□□□ 0.29
GPNMB-203ENST00000409458 NEK4P51957 841 aa16.86■□□□□ 0.29
GPNMB-203ENST00000409458 UBE3CQ15386 1083 aa16.86■□□□□ 0.29
GPNMB-203ENST00000409458 GPR101Q96P66 508 aaPredicted RBP16.86■□□□□ 0.29
GPNMB-203ENST00000409458 UPF3BQ9BZI7 483 aaKnown RBP16.86■□□□□ 0.29
GPNMB-203ENST00000409458 CCDC125Q86Z20 511 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 SPRYD3Q8NCJ5 442 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 DSCC1Q9BVC3 393 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 DENND2AQ9ULE3 1009 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 U3KPZ7 1027 aaPredicted RBP16.85■□□□□ 0.29
GPNMB-203ENST00000409458 SEMA3EO15041 775 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 UFL1O94874 794 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 HSPD1P10809 573 aaKnown RBP16.85■□□□□ 0.29
GPNMB-203ENST00000409458 MAP3K12Q12852 859 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 TMC4Q7Z404 712 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 MAGEB6Q8N7X4 407 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 MASTLQ96GX5 879 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 NSFL1CQ9UNZ2 370 aaKnown RBP16.85■□□□□ 0.29
GPNMB-203ENST00000409458 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
GPNMB-203ENST00000409458 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
GPNMB-203ENST00000409458 DUOX1Q9NRD9 1551 aa16.84■□□□□ 0.29
GPNMB-203ENST00000409458 MAST2Q6P0Q8 1798 aa16.84■□□□□ 0.29
GPNMB-203ENST00000409458 PDS5AQ29RF7 1337 aaKnown RBP16.84■□□□□ 0.29
GPNMB-203ENST00000409458 FOXP2O15409 715 aa16.84■□□□□ 0.29
GPNMB-203ENST00000409458 GPAA1O43292 621 aa16.84■□□□□ 0.29
GPNMB-203ENST00000409458 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
GPNMB-203ENST00000409458 ATP2B4P23634 1241 aa16.84■□□□□ 0.29
GPNMB-203ENST00000409458 C15orf52Q6ZUT6 534 aaKnown RBP16.84■□□□□ 0.29
GPNMB-203ENST00000409458 C2CD5Q86YS7 1000 aa16.84■□□□□ 0.29
GPNMB-203ENST00000409458 PODXL2Q9NZ53 605 aa16.84■□□□□ 0.29
GPNMB-203ENST00000409458 GGA1Q9UJY5 639 aa16.84■□□□□ 0.29
GPNMB-203ENST00000409458 RNF20Q5VTR2 975 aa16.83■□□□□ 0.28
GPNMB-203ENST00000409458 SP8Q8IXZ3 490 aa16.83■□□□□ 0.28
GPNMB-203ENST00000409458 JAKMIP1Q96N16 626 aaKnown RBP16.83■□□□□ 0.28
GPNMB-203ENST00000409458 SLKQ9H2G2 1235 aaPredicted RBP16.83■□□□□ 0.28
GPNMB-203ENST00000409458 ATP6V0A2Q9Y487 856 aa16.83■□□□□ 0.28
GPNMB-203ENST00000409458 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
GPNMB-203ENST00000409458 ALDH1B1P30837 517 aa16.82■□□□□ 0.28
GPNMB-203ENST00000409458 C10orf71Q711Q0 1435 aa16.82■□□□□ 0.28
GPNMB-203ENST00000409458 TBC1D16Q8TBP0 767 aa16.82■□□□□ 0.28
GPNMB-203ENST00000409458 LRP2BPQ9P2M1 347 aa16.82■□□□□ 0.28
GPNMB-203ENST00000409458 ABCF2Q9UG63 623 aa16.82■□□□□ 0.28
GPNMB-203ENST00000409458 POLLQ9UGP5 575 aa16.82■□□□□ 0.28
GPNMB-203ENST00000409458 ZBTB22O15209 634 aa16.81■□□□□ 0.28
GPNMB-203ENST00000409458 FRAT2O75474 233 aaPredicted RBP16.81■□□□□ 0.28
GPNMB-203ENST00000409458 CYP21A2P08686 494 aa16.81■□□□□ 0.28
GPNMB-203ENST00000409458 CPA1P15085 419 aa16.81■□□□□ 0.28
GPNMB-203ENST00000409458 OLFM4Q6UX06 510 aa16.81■□□□□ 0.28
GPNMB-203ENST00000409458 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
GPNMB-203ENST00000409458 TTC14Q96N46 770 aa16.81■□□□□ 0.28
GPNMB-203ENST00000409458 DLEC1Q9Y238 1755 aa16.81■□□□□ 0.28
GPNMB-203ENST00000409458 CHAF1AQ13111 956 aaPredicted RBP16.81■□□□□ 0.28
GPNMB-203ENST00000409458 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
GPNMB-203ENST00000409458 ZNF804AQ7Z570 1209 aa16.81■□□□□ 0.28
GPNMB-203ENST00000409458 TM6SF1Q9BZW5 370 aa16.81■□□□□ 0.28
GPNMB-203ENST00000409458 LAMA4Q16363 1823 aa16.8■□□□□ 0.28
GPNMB-203ENST00000409458 SLX4Q8IY92 1834 aa16.8■□□□□ 0.28
GPNMB-203ENST00000409458 A0A0G2JLW4 131 aa16.8■□□□□ 0.28
GPNMB-203ENST00000409458 H0YIN7 160 aa16.8■□□□□ 0.28
GPNMB-203ENST00000409458 CHRNA5P30532 468 aa16.8■□□□□ 0.28
GPNMB-203ENST00000409458 COL9A3Q14050 684 aaPredicted RBP16.8■□□□□ 0.28
GPNMB-203ENST00000409458 STYK1Q6J9G0 422 aa16.8■□□□□ 0.28
GPNMB-203ENST00000409458 ZSWIM6Q9HCJ5 1215 aa16.8■□□□□ 0.28
GPNMB-203ENST00000409458 RAI14Q9P0K7 980 aa16.8■□□□□ 0.28
GPNMB-203ENST00000409458 JAG2Q9Y219 1238 aa16.8■□□□□ 0.28
GPNMB-203ENST00000409458 MCM2P49736 904 aa16.79■□□□□ 0.28
GPNMB-203ENST00000409458 TDRD7Q8NHU6 1098 aaKnown RBP16.79■□□□□ 0.28
GPNMB-203ENST00000409458 SLC16A10Q8TF71 515 aa16.79■□□□□ 0.28
GPNMB-203ENST00000409458 AIDAQ96BJ3 306 aa16.79■□□□□ 0.28
GPNMB-203ENST00000409458 KIAA1551Q9HCM1 1747 aa16.79■□□□□ 0.28
GPNMB-203ENST00000409458 CCDC88AQ3V6T2 1871 aa16.79■□□□□ 0.28
GPNMB-203ENST00000409458 MBD4O95243 580 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 TTLL5Q6EMB2 1281 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 NOL8Q76FK4 1167 aaKnown RBP16.78■□□□□ 0.28
GPNMB-203ENST00000409458 ADGRA1Q86SQ6 560 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 KIF13BQ9NQT8 1826 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 C6orf229H3BNL8 230 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 CYP7A1P22680 504 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 PSMA5P28066 241 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 AK2P54819 239 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 STOX1Q6ZVD7 989 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 RUFY3Q7L099 469 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 IL27Q8NEV9 243 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 ZNF384Q8TF68 577 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 STRBPQ96SI9 672 aaKnown RBP16.78■□□□□ 0.28
GPNMB-203ENST00000409458 ARMT1Q9H993 441 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 CD209Q9NNX6 404 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 CYP46A1Q9Y6A2 500 aa16.78■□□□□ 0.28
GPNMB-203ENST00000409458 KRT32Q14532 448 aa16.77■□□□□ 0.28
GPNMB-203ENST00000409458 LCORLQ8N3X6 602 aa16.77■□□□□ 0.28
GPNMB-203ENST00000409458 MPNDQ8N594 471 aa16.77■□□□□ 0.28
GPNMB-203ENST00000409458 MIGA1Q8NAN2 632 aa16.77■□□□□ 0.28
GPNMB-203ENST00000409458 TMX3Q96JJ7 454 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms