RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 PODNQ7Z5L7 613 aa9.99□□□□□ -0.81
LSM5-202ENST00000409292 ANKRD18AQ8IVF6 992 aa9.99□□□□□ -0.81
LSM5-202ENST00000409292 CDC5LQ99459 802 aaKnown RBP9.99□□□□□ -0.81
LSM5-202ENST00000409292 PODXL2Q9NZ53 605 aa9.99□□□□□ -0.81
LSM5-202ENST00000409292 XDHP47989 1333 aa9.99□□□□□ -0.81
LSM5-202ENST00000409292 AKAP11Q9UKA4 1901 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 USP17L3A6NCW0 530 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 USP17L4A6NCW7 530 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 PDE8AO60658 829 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 SOX10P56693 466 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 SREBF2Q12772 1141 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 DUSP27Q5VZP5 1158 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 USP17L1Q7RTZ2 530 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 CCDC191Q8NCU4 936 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 CSRNP1Q96S65 589 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 ZIC5Q96T25 663 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 MYOZ2Q9NPC6 264 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 CWC25Q9NXE8 425 aaPredicted RBP9.98□□□□□ -0.81
LSM5-202ENST00000409292 MYO3BQ8WXR4 1341 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 PITPNM2Q9BZ72 1349 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 DDX60Q8IY21 1712 aaKnown RBP9.98□□□□□ -0.81
LSM5-202ENST00000409292 PDE4DIPQ5VU43 2346 aa9.98□□□□□ -0.81
LSM5-202ENST00000409292 LAMB2P55268 1798 aa9.97□□□□□ -0.81
LSM5-202ENST00000409292 ZNF280AP59817 542 aaPredicted RBP9.97□□□□□ -0.81
LSM5-202ENST00000409292 NEXNQ0ZGT2 675 aa9.97□□□□□ -0.81
LSM5-202ENST00000409292 PRPF38BQ5VTL8 546 aaKnown RBP9.97□□□□□ -0.81
LSM5-202ENST00000409292 ARMC9Q7Z3E5 817 aa9.97□□□□□ -0.81
LSM5-202ENST00000409292 CCDC146Q8IYE0 955 aa9.97□□□□□ -0.81
LSM5-202ENST00000409292 FBXW7Q969H0 707 aa9.97□□□□□ -0.81
LSM5-202ENST00000409292 ZNF428Q96B54 188 aa9.97□□□□□ -0.81
LSM5-202ENST00000409292 MYBBP1AQ9BQG0 1328 aaKnown RBP9.97□□□□□ -0.81
LSM5-202ENST00000409292 LRRC37AA6NMS7 1700 aa9.96□□□□□ -0.81
LSM5-202ENST00000409292 PCCAP05165 728 aaPredicted RBP9.96□□□□□ -0.82
LSM5-202ENST00000409292 GNAI1P63096 354 aa9.96□□□□□ -0.82
LSM5-202ENST00000409292 PPP1R15BQ5SWA1 713 aa9.96□□□□□ -0.82
LSM5-202ENST00000409292 RASAL3Q86YV0 1011 aa9.96□□□□□ -0.82
LSM5-202ENST00000409292 GCC1Q96CN9 775 aa9.96□□□□□ -0.82
LSM5-202ENST00000409292 MYD88Q99836 296 aa9.96□□□□□ -0.82
LSM5-202ENST00000409292 RTL9Q8NET4 1388 aa9.96□□□□□ -0.82
LSM5-202ENST00000409292 ALDH1A1P00352 501 aa9.95□□□□□ -0.82
LSM5-202ENST00000409292 EGFRP00533 1210 aa9.95□□□□□ -0.82
LSM5-202ENST00000409292 KRT24Q2M2I5 525 aa9.95□□□□□ -0.82
LSM5-202ENST00000409292 CCDC30Q5VVM6 783 aa9.95□□□□□ -0.82
LSM5-202ENST00000409292 DLK2Q6UY11 383 aa9.95□□□□□ -0.82
LSM5-202ENST00000409292 APOBEC3FQ8IUX4 373 aaKnown RBP9.95□□□□□ -0.82
LSM5-202ENST00000409292 KCNQ5Q9NR82 932 aa9.95□□□□□ -0.82
LSM5-202ENST00000409292 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
LSM5-202ENST00000409292 DUOX1Q9NRD9 1551 aa9.95□□□□□ -0.82
LSM5-202ENST00000409292 POLR2AP24928 1970 aaKnown RBP9.94□□□□□ -0.82
LSM5-202ENST00000409292 ZNF609O15014 1411 aa9.94□□□□□ -0.82
LSM5-202ENST00000409292 IGHMBP2P38935 993 aaKnown RBP9.94□□□□□ -0.82
LSM5-202ENST00000409292 KCNJ4P48050 445 aa9.94□□□□□ -0.82
LSM5-202ENST00000409292 INHBEP58166 350 aa9.94□□□□□ -0.82
LSM5-202ENST00000409292 NOM1Q5C9Z4 860 aaKnown RBP9.94□□□□□ -0.82
LSM5-202ENST00000409292 STK31Q9BXU1 1019 aa9.94□□□□□ -0.82
LSM5-202ENST00000409292 COA1Q9GZY4 146 aa9.94□□□□□ -0.82
LSM5-202ENST00000409292 SEC31BQ9NQW1 1179 aa9.94□□□□□ -0.82
LSM5-202ENST00000409292 IFT57Q9NWB7 429 aa9.94□□□□□ -0.82
LSM5-202ENST00000409292 PAPPA2Q9BXP8 1791 aa9.93□□□□□ -0.82
LSM5-202ENST00000409292 UBE2Q2LH0YL09 131 aa9.93□□□□□ -0.82
LSM5-202ENST00000409292 FKTNO75072 461 aa9.93□□□□□ -0.82
LSM5-202ENST00000409292 LSM11P83369 360 aaKnown RBP eCLIP9.93□□□□□ -0.82
LSM5-202ENST00000409292 STRIP1Q5VSL9 837 aa9.93□□□□□ -0.82
LSM5-202ENST00000409292 OTUD7BQ6GQQ9 843 aa9.93□□□□□ -0.82
LSM5-202ENST00000409292 FBXO46Q6PJ61 603 aaPredicted RBP9.93□□□□□ -0.82
LSM5-202ENST00000409292 ZNF296Q8WUU4 475 aaPredicted RBP9.93□□□□□ -0.82
LSM5-202ENST00000409292 CCDC85AQ96PX6 553 aaPredicted RBP9.93□□□□□ -0.82
LSM5-202ENST00000409292 METTL22Q9BUU2 404 aaPredicted RBP9.93□□□□□ -0.82
LSM5-202ENST00000409292 ANKRD2Q9GZV1 360 aa9.93□□□□□ -0.82
LSM5-202ENST00000409292 LEMD3Q9Y2U8 911 aa9.93□□□□□ -0.82
LSM5-202ENST00000409292 TAF1P21675 1872 aa9.93□□□□□ -0.82
LSM5-202ENST00000409292 MED23Q9ULK4 1368 aa9.92□□□□□ -0.82
LSM5-202ENST00000409292 ASTN2O75129 1339 aaPredicted RBP9.92□□□□□ -0.82
LSM5-202ENST00000409292 GPR25O00155 361 aa9.92□□□□□ -0.82
LSM5-202ENST00000409292 ELL2O00472 640 aaPredicted RBP9.92□□□□□ -0.82
LSM5-202ENST00000409292 MYO1BO43795 1136 aa9.92□□□□□ -0.82
LSM5-202ENST00000409292 PPP1R12BO60237 982 aaPredicted RBP9.92□□□□□ -0.82
LSM5-202ENST00000409292 TBC1D8O95759 1140 aa9.92□□□□□ -0.82
LSM5-202ENST00000409292 TM4SF4P48230 202 aa9.92□□□□□ -0.82
LSM5-202ENST00000409292 CTSWP56202 376 aa9.92□□□□□ -0.82
LSM5-202ENST00000409292 OXER1Q8TDS5 423 aa9.92□□□□□ -0.82
LSM5-202ENST00000409292 MPHOSPH8Q99549 860 aa9.92□□□□□ -0.82
LSM5-202ENST00000409292 MBIPQ9NS73 344 aa9.92□□□□□ -0.82
LSM5-202ENST00000409292 BSDC1Q9NW68 430 aaPredicted RBP9.92□□□□□ -0.82
LSM5-202ENST00000409292 MANSC4A6NHS7 340 aaPredicted RBP9.91□□□□□ -0.82
LSM5-202ENST00000409292 WDHD1O75717 1129 aaPredicted RBP9.91□□□□□ -0.82
LSM5-202ENST00000409292 CCT4P50991 539 aaKnown RBP9.91□□□□□ -0.82
LSM5-202ENST00000409292 ARHGEF6Q15052 776 aa9.91□□□□□ -0.82
LSM5-202ENST00000409292 INTS3Q68E01 1043 aaKnown RBP9.91□□□□□ -0.82
LSM5-202ENST00000409292 BBXQ8WY36 941 aaPredicted RBP9.91□□□□□ -0.82
LSM5-202ENST00000409292 RNF166Q96A37 237 aaPredicted RBP9.91□□□□□ -0.82
LSM5-202ENST00000409292 SLC10A4Q96EP9 437 aa9.91□□□□□ -0.82
LSM5-202ENST00000409292 DDX27Q96GQ7 796 aaKnown RBP9.91□□□□□ -0.82
LSM5-202ENST00000409292 GMLQ99445 158 aa9.91□□□□□ -0.82
LSM5-202ENST00000409292 PHAXQ9H814 394 aaKnown RBP9.91□□□□□ -0.82
LSM5-202ENST00000409292 DLGAP5Q15398 846 aa9.9□□□□□ -0.82
LSM5-202ENST00000409292 NBPF9Q3BBW0 867 aa9.9□□□□□ -0.82
LSM5-202ENST00000409292 SUPT20HL1Q3ZLR7 823 aa9.9□□□□□ -0.82
LSM5-202ENST00000409292 PPP4R3BQ5MIZ7 849 aa9.9□□□□□ -0.82
LSM5-202ENST00000409292 TTLL5Q6EMB2 1281 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms