RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 RSBN1LQ6PCB5 846 aaPredicted RBP20.61■□□□□ 0.89
HMGA1P7-201ENST00000406908 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
HMGA1P7-201ENST00000406908 KDM2BQ8NHM5 1336 aa20.6■□□□□ 0.89
HMGA1P7-201ENST00000406908 POTECB2RU33 542 aa20.6■□□□□ 0.89
HMGA1P7-201ENST00000406908 RASGRF1Q13972 1273 aa20.6■□□□□ 0.89
HMGA1P7-201ENST00000406908 SCARF1Q14162 830 aa20.6■□□□□ 0.89
HMGA1P7-201ENST00000406908 TTC39AQ5SRH9 613 aa20.6■□□□□ 0.89
HMGA1P7-201ENST00000406908 CERS5Q8N5B7 392 aa20.6■□□□□ 0.89
HMGA1P7-201ENST00000406908 L3MBTL3Q96JM7 780 aaPredicted RBP20.6■□□□□ 0.89
HMGA1P7-201ENST00000406908 GMLQ99445 158 aa20.6■□□□□ 0.89
HMGA1P7-201ENST00000406908 COL1A1P02452 1464 aaPredicted RBP20.59■□□□□ 0.89
HMGA1P7-201ENST00000406908 SEMA3EO15041 775 aa20.59■□□□□ 0.89
HMGA1P7-201ENST00000406908 UQCRFS1P1P0C7P4 283 aa20.59■□□□□ 0.89
HMGA1P7-201ENST00000406908 ARID4AP29374 1257 aaPredicted RBP20.59■□□□□ 0.89
HMGA1P7-201ENST00000406908 SCNN1DP51172 638 aa20.59■□□□□ 0.89
HMGA1P7-201ENST00000406908 HMG20BQ9P0W2 317 aa20.59■□□□□ 0.89
HMGA1P7-201ENST00000406908 DENND2AQ9ULE3 1009 aa20.59■□□□□ 0.89
HMGA1P7-201ENST00000406908 PSME4Q14997 1843 aa20.58■□□□□ 0.89
HMGA1P7-201ENST00000406908 MCAMP43121 646 aa20.58■□□□□ 0.89
HMGA1P7-201ENST00000406908 AGBL3Q8NEM8 1001 aa20.58■□□□□ 0.89
HMGA1P7-201ENST00000406908 DPF2Q92785 391 aa20.58■□□□□ 0.89
HMGA1P7-201ENST00000406908 ZNF512BQ96KM6 892 aaPredicted RBP20.58■□□□□ 0.89
HMGA1P7-201ENST00000406908 RRAGCQ9HB90 399 aa20.58■□□□□ 0.89
HMGA1P7-201ENST00000406908 NMRK2Q9NPI5 230 aa20.58■□□□□ 0.89
HMGA1P7-201ENST00000406908 SHTN1A0MZ66 631 aa20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 RPS12P25398 132 aaKnown RBP20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 FKBP1AP62942 108 aaKnown RBP20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 NUCB1Q02818 461 aa20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 MFSD14BQ5SR56 506 aa20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 ERICH6BQ5W0A0 696 aa20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 PI16Q6UXB8 463 aa20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 ZNF784Q8NCA9 323 aaPredicted RBP20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 OTUD7AQ8TE49 926 aaPredicted RBP20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 LNPKQ9C0E8 428 aa20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 GPRC5DQ9NZD1 345 aa20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 CNOT7Q9UIV1 285 aaKnown RBP20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 ZNF646O15015 1829 aaPredicted RBP20.57■□□□□ 0.88
HMGA1P7-201ENST00000406908 EPS15P42566 896 aa20.56■□□□□ 0.88
HMGA1P7-201ENST00000406908 GRIK5Q16478 980 aa20.56■□□□□ 0.88
HMGA1P7-201ENST00000406908 SPATA5Q8NB90 893 aa20.56■□□□□ 0.88
HMGA1P7-201ENST00000406908 GPBP1L1Q9HC44 474 aaPredicted RBP20.56■□□□□ 0.88
HMGA1P7-201ENST00000406908 SNRKQ9NRH2 765 aa20.56■□□□□ 0.88
HMGA1P7-201ENST00000406908 MYO3BQ8WXR4 1341 aa20.55■□□□□ 0.88
HMGA1P7-201ENST00000406908 CHD1LQ86WJ1 897 aa20.55■□□□□ 0.88
HMGA1P7-201ENST00000406908 KIAA0825Q8IV33 1275 aa20.55■□□□□ 0.88
HMGA1P7-201ENST00000406908 WDR66Q8TBY9 1149 aa20.55■□□□□ 0.88
HMGA1P7-201ENST00000406908 TBC1D22AQ8WUA7 517 aa20.55■□□□□ 0.88
HMGA1P7-201ENST00000406908 WDR90Q96KV7 1748 aa20.55■□□□□ 0.88
HMGA1P7-201ENST00000406908 VEGFAP15692 232 aaPredicted RBP20.54■□□□□ 0.88
HMGA1P7-201ENST00000406908 MICALL2Q8IY33 904 aa20.54■□□□□ 0.88
HMGA1P7-201ENST00000406908 CCDC136Q96JN2 1154 aa20.54■□□□□ 0.88
HMGA1P7-201ENST00000406908 HACL1Q9UJ83 578 aa20.54■□□□□ 0.88
HMGA1P7-201ENST00000406908 PDS5AQ29RF7 1337 aaKnown RBP20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 F8W031 263 aaPredicted RBP20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 USP17L8P0C7I0 530 aa20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 ATP5JP18859 108 aa20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 LMOD1P29536 600 aaPredicted RBP20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 ZAP70P43403 619 aa20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 TAF1DQ9H5J8 278 aaPredicted RBP20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 ECHDC1Q9NTX5 307 aa20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 AKAP11Q9UKA4 1901 aa20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 SALL3Q9BXA9 1300 aa20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
HMGA1P7-201ENST00000406908 IQCA1LA6NCM1 817 aa20.52■□□□□ 0.88
HMGA1P7-201ENST00000406908 H7C1D1 291 aa20.52■□□□□ 0.88
HMGA1P7-201ENST00000406908 ZNF280AP59817 542 aaPredicted RBP20.52■□□□□ 0.88
HMGA1P7-201ENST00000406908 TSHZ3Q63HK5 1081 aa20.52■□□□□ 0.88
HMGA1P7-201ENST00000406908 TBC1D9Q6ZT07 1266 aa20.52■□□□□ 0.88
HMGA1P7-201ENST00000406908 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.52■□□□□ 0.88
HMGA1P7-201ENST00000406908 BOLA2Q9H3K6 86 aa20.52■□□□□ 0.88
HMGA1P7-201ENST00000406908 NDUFB9Q9Y6M9 179 aa20.52■□□□□ 0.88
HMGA1P7-201ENST00000406908 MYH13Q9UKX3 1938 aa20.51■□□□□ 0.87
HMGA1P7-201ENST00000406908 CYP2E1P05181 493 aaPredicted RBP20.51■□□□□ 0.87
HMGA1P7-201ENST00000406908 EPHX2P34913 555 aa20.51■□□□□ 0.87
HMGA1P7-201ENST00000406908 SAMD7Q7Z3H4 446 aa20.51■□□□□ 0.87
HMGA1P7-201ENST00000406908 PPP4R2Q9NY27 417 aa20.51■□□□□ 0.87
HMGA1P7-201ENST00000406908 TTF2Q9UNY4 1162 aaKnown RBP20.51■□□□□ 0.87
HMGA1P7-201ENST00000406908 EGFRP00533 1210 aa20.5■□□□□ 0.87
HMGA1P7-201ENST00000406908 PRDX5P30044 214 aa20.5■□□□□ 0.87
HMGA1P7-201ENST00000406908 CENPQQ7L2Z9 268 aaPredicted RBP20.5■□□□□ 0.87
HMGA1P7-201ENST00000406908 ANTXR1Q9H6X2 564 aa20.5■□□□□ 0.87
HMGA1P7-201ENST00000406908 ABCF2Q9UG63 623 aa20.5■□□□□ 0.87
HMGA1P7-201ENST00000406908 SUGT1Q9Y2Z0 365 aa20.5■□□□□ 0.87
HMGA1P7-201ENST00000406908 SCN4AP35499 1836 aa20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 KIF3CO14782 793 aa20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 MX1P20591 662 aa20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 TBC1D10BQ4KMP7 808 aaPredicted RBP20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 RBM26Q5T8P6 1007 aaKnown RBP20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 OGFOD1Q8N543 542 aa20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 ZGPATQ8N5A5 531 aaKnown RBP20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 TRPM4Q8TD43 1214 aa20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 GPATCH3Q96I76 525 aa20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 ADARB2Q9NS39 739 aaKnown RBP20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 HDAC9Q9UKV0 1011 aa20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 TTC41PQ6P2S7 1318 aa20.49■□□□□ 0.87
HMGA1P7-201ENST00000406908 LDHBP07195 334 aaKnown RBP20.48■□□□□ 0.87
HMGA1P7-201ENST00000406908 PDE4AP27815 886 aa20.48■□□□□ 0.87
HMGA1P7-201ENST00000406908 HIRAP54198 1017 aaPredicted RBP20.48■□□□□ 0.87
HMGA1P7-201ENST00000406908 PDE1AP54750 535 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms