RNA–Protein interactions for RNA: ENST00000405234.1

TUBBP9-201, Transcript of tubulin beta class I pseudogene 9, humanhuman

BASIC

Gene TUBBP9, Length 1,099 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP9-201ENST00000405234 VEGFBP49765 207 aa11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 GMPSP49915 693 aaPredicted RBP11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 RPS8P62241 208 aaKnown RBP11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 GPSM2P81274 684 aa11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 TMC4Q7Z404 712 aa11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 WWC1Q8IX03 1113 aa11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 PARP9Q8IXQ6 854 aa11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 CCDC85AQ96PX6 553 aaPredicted RBP11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 METTL22Q9BUU2 404 aaPredicted RBP11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 BCL2L13Q9BXK5 485 aa11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 GPRC5DQ9NZD1 345 aa11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 POLLQ9UGP5 575 aa11.15□□□□□ -0.62
TUBBP9-201ENST00000405234 DDX58O95786 925 aaKnown RBP11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 DNAJB2P25686 324 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 TNIP1Q15025 636 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 DEFB115Q30KQ5 88 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 ADGRD1Q6QNK2 874 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 POTEGQ6S5H5 508 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 CCDC191Q8NCU4 936 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 NLRP7Q8WX94 980 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 GPR101Q96P66 508 aaPredicted RBP11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 MRS2Q9HD23 443 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 GPCPD1Q9NPB8 672 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 ADARB2Q9NS39 739 aaKnown RBP11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 CWC25Q9NXE8 425 aaPredicted RBP11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 SEPT9Q9UHD8 586 aaPredicted RBP11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 MAP3K2Q9Y2U5 619 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 CNTNAP1P78357 1384 aa11.14□□□□□ -0.63
TUBBP9-201ENST00000405234 ADAMTSL1Q8N6G6 1762 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 DDX60Q8IY21 1712 aaKnown RBP11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 PI4KAP2A4QPH2 592 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 RCCD1A6NED2 376 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 TRAF5O00463 557 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 PDE8AO60658 829 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 HIRAP54198 1017 aaPredicted RBP11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 CCDC27Q2M243 656 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 TWISTNBQ3B726 338 aaPredicted RBP11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 KSR2Q6VAB6 950 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 G2E3Q7L622 706 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 PI4KAP1Q8N8J0 262 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 PHOX2BQ99453 314 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 CHMP4AQ9BY43 222 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 DBNDD1Q9H9R9 158 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 KCNQ5Q9NR82 932 aa11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 CNOT7Q9UIV1 285 aaKnown RBP11.13□□□□□ -0.63
TUBBP9-201ENST00000405234 COL4A1P02462 1669 aa11.12□□□□□ -0.63
TUBBP9-201ENST00000405234 SHTN1A0MZ66 631 aa11.12□□□□□ -0.63
TUBBP9-201ENST00000405234 POTEMA6NI47 508 aa11.12□□□□□ -0.63
TUBBP9-201ENST00000405234 ANP32CO43423 234 aa11.12□□□□□ -0.63
TUBBP9-201ENST00000405234 PCCAP05165 728 aaPredicted RBP11.12□□□□□ -0.63
TUBBP9-201ENST00000405234 IGKV5-2P06315 115 aa11.12□□□□□ -0.63
TUBBP9-201ENST00000405234 CST9Q5W186 159 aa11.12□□□□□ -0.63
TUBBP9-201ENST00000405234 TBC1D16Q8TBP0 767 aa11.12□□□□□ -0.63
TUBBP9-201ENST00000405234 ABT1Q9ULW3 272 aaKnown RBP11.12□□□□□ -0.63
TUBBP9-201ENST00000405234 PCNTO95613 3336 aa11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 RASSF10A6NK89 507 aa11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 C3orf80F5H4A9 247 aa11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 H7C1D1 291 aa11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 PSMD14O00487 310 aa11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 HSP90B1P14625 803 aaKnown RBP11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 CCDC152Q4G0S7 254 aa11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 MRPL50Q8N5N7 158 aaKnown RBP11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 EYA3Q99504 573 aa11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 STK31Q9BXU1 1019 aa11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 ZC3H12CQ9C0D7 883 aaKnown RBP11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 PGAP2Q9UHJ9 254 aa11.11□□□□□ -0.63
TUBBP9-201ENST00000405234 WDR33Q9C0J8 1336 aaKnown RBP11.1□□□□□ -0.63
TUBBP9-201ENST00000405234 FOXN1O15353 648 aa11.1□□□□□ -0.63
TUBBP9-201ENST00000405234 ECE2O60344 883 aa11.1□□□□□ -0.63
TUBBP9-201ENST00000405234 CWF19L2Q2TBE0 894 aaKnown RBP11.1□□□□□ -0.63
TUBBP9-201ENST00000405234 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
TUBBP9-201ENST00000405234 SAMD7Q7Z3H4 446 aa11.1□□□□□ -0.63
TUBBP9-201ENST00000405234 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
TUBBP9-201ENST00000405234 GLIS2Q9BZE0 524 aaPredicted RBP11.1□□□□□ -0.63
TUBBP9-201ENST00000405234 ANKIB1Q9P2G1 1089 aa11.1□□□□□ -0.63
TUBBP9-201ENST00000405234 DUOX1Q9NRD9 1551 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 WTIPA6NIX2 430 aaPredicted RBP11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 SLC4A3P48751 1232 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 NEXNQ0ZGT2 675 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 GRM1Q13255 1194 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 CYP4F22Q6NT55 531 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 USP48Q86UV5 1035 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 LAPTM4BQ86VI4 370 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 TTLL11Q8NHH1 800 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 DPF2Q92785 391 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 PODXL2Q9NZ53 605 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 IL16Q14005 1332 aa11.09□□□□□ -0.63
TUBBP9-201ENST00000405234 NEURL1BA8MQ27 555 aa11.08□□□□□ -0.64
TUBBP9-201ENST00000405234 VAMP4O75379 141 aa11.08□□□□□ -0.64
TUBBP9-201ENST00000405234 UFL1O94874 794 aa11.08□□□□□ -0.64
TUBBP9-201ENST00000405234 CELF2O95319 508 aaKnown RBP11.08□□□□□ -0.64
TUBBP9-201ENST00000405234 EGFRP00533 1210 aa11.08□□□□□ -0.64
TUBBP9-201ENST00000405234 EXOSC9Q06265 439 aaKnown RBP11.08□□□□□ -0.64
TUBBP9-201ENST00000405234 TBC1D10BQ4KMP7 808 aaPredicted RBP11.08□□□□□ -0.64
TUBBP9-201ENST00000405234 CDC37L1Q7L3B6 337 aa11.08□□□□□ -0.64
TUBBP9-201ENST00000405234 ANKRD18AQ8IVF6 992 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms