RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 FBXO33Q7Z6M2 555 aa19.87■□□□□ 0.77
ATG4B-203ENST00000400772 MEIS3Q99687 375 aa19.87■□□□□ 0.77
ATG4B-203ENST00000400772 GBA2Q9HCG7 927 aaPredicted RBP19.87■□□□□ 0.77
ATG4B-203ENST00000400772 TNNQ9UQP3 1299 aa19.87■□□□□ 0.77
ATG4B-203ENST00000400772 FAM205AQ6ZU69 1335 aa19.86■□□□□ 0.77
ATG4B-203ENST00000400772 AOC2O75106 756 aa19.86■□□□□ 0.77
ATG4B-203ENST00000400772 TRIM27P14373 513 aa19.86■□□□□ 0.77
ATG4B-203ENST00000400772 HDAC9Q9UKV0 1011 aa19.86■□□□□ 0.77
ATG4B-203ENST00000400772 LRRFIP2Q9Y608 721 aaKnown RBP19.86■□□□□ 0.77
ATG4B-203ENST00000400772 EYA2O00167 538 aa19.85■□□□□ 0.77
ATG4B-203ENST00000400772 HUNKP57058 714 aa19.85■□□□□ 0.77
ATG4B-203ENST00000400772 IFFO2Q5TF58 517 aa19.85■□□□□ 0.77
ATG4B-203ENST00000400772 ATG9AQ7Z3C6 839 aa19.85■□□□□ 0.77
ATG4B-203ENST00000400772 C2orf69Q8N8R5 385 aa19.85■□□□□ 0.77
ATG4B-203ENST00000400772 PCDHAC2Q9Y5I4 1007 aa19.85■□□□□ 0.77
ATG4B-203ENST00000400772 THSD7BQ9C0I4 1608 aa19.84■□□□□ 0.77
ATG4B-203ENST00000400772 F8W031 263 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-203ENST00000400772 IPO8O15397 1037 aaKnown RBP19.84■□□□□ 0.77
ATG4B-203ENST00000400772 FGFR2P21802 821 aa19.84■□□□□ 0.77
ATG4B-203ENST00000400772 MAP2K1Q02750 393 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-203ENST00000400772 PRAMEF18Q5VWM3 479 aa19.84■□□□□ 0.77
ATG4B-203ENST00000400772 ATF7IPQ6VMQ6 1270 aa19.84■□□□□ 0.77
ATG4B-203ENST00000400772 MTMR14Q8NCE2 650 aa19.84■□□□□ 0.77
ATG4B-203ENST00000400772 MAP2K2P36507 400 aa19.83■□□□□ 0.77
ATG4B-203ENST00000400772 FRAT1Q92837 279 aaPredicted RBP19.83■□□□□ 0.77
ATG4B-203ENST00000400772 BCAMP50895 628 aa19.82■□□□□ 0.76
ATG4B-203ENST00000400772 AIDAQ96BJ3 306 aa19.82■□□□□ 0.76
ATG4B-203ENST00000400772 ZIC5Q96T25 663 aa19.82■□□□□ 0.76
ATG4B-203ENST00000400772 ZBED9Q6R2W3 1325 aa19.81■□□□□ 0.76
ATG4B-203ENST00000400772 FAM155AB1AL88 458 aaPredicted RBP19.81■□□□□ 0.76
ATG4B-203ENST00000400772 CTCFP49711 727 aaPredicted RBP19.81■□□□□ 0.76
ATG4B-203ENST00000400772 PUM3Q15397 648 aaKnown RBP19.81■□□□□ 0.76
ATG4B-203ENST00000400772 DLGAP5Q15398 846 aa19.81■□□□□ 0.76
ATG4B-203ENST00000400772 CFAP100Q494V2 611 aa19.81■□□□□ 0.76
ATG4B-203ENST00000400772 MFSD14BQ5SR56 506 aa19.81■□□□□ 0.76
ATG4B-203ENST00000400772 RGMBQ6NW40 437 aa19.81■□□□□ 0.76
ATG4B-203ENST00000400772 FBXO3Q9UK99 471 aa19.81■□□□□ 0.76
ATG4B-203ENST00000400772 IQSEC3Q9UPP2 1182 aaPredicted RBP19.81■□□□□ 0.76
ATG4B-203ENST00000400772 HDAC5Q9UQL6 1122 aa19.81■□□□□ 0.76
ATG4B-203ENST00000400772 AOX1Q06278 1338 aa19.8■□□□□ 0.76
ATG4B-203ENST00000400772 CIAO1O76071 339 aa19.8■□□□□ 0.76
ATG4B-203ENST00000400772 CAVIN4Q5BKX8 364 aa19.8■□□□□ 0.76
ATG4B-203ENST00000400772 VPS37DQ86XT2 251 aa19.8■□□□□ 0.76
ATG4B-203ENST00000400772 CLUAP1Q96AJ1 413 aa19.8■□□□□ 0.76
ATG4B-203ENST00000400772 PRMT6Q96LA8 375 aaPredicted RBP19.8■□□□□ 0.76
ATG4B-203ENST00000400772 SIL1Q9H173 461 aa19.8■□□□□ 0.76
ATG4B-203ENST00000400772 PA2G4Q9UQ80 394 aaKnown RBP19.8■□□□□ 0.76
ATG4B-203ENST00000400772 SPDYE2BA6NHP3 402 aa19.79■□□□□ 0.76
ATG4B-203ENST00000400772 GNAI3P08754 354 aa19.79■□□□□ 0.76
ATG4B-203ENST00000400772 IFIT1P09914 478 aaKnown RBP19.79■□□□□ 0.76
ATG4B-203ENST00000400772 SPDYE6P0CI01 402 aa19.79■□□□□ 0.76
ATG4B-203ENST00000400772 GRIK5Q16478 980 aa19.79■□□□□ 0.76
ATG4B-203ENST00000400772 MOB2Q70IA6 237 aa19.79■□□□□ 0.76
ATG4B-203ENST00000400772 COPRSQ9NQ92 184 aa19.79■□□□□ 0.76
ATG4B-203ENST00000400772 HSPA8P11142 646 aaKnown RBP19.78■□□□□ 0.76
ATG4B-203ENST00000400772 ZNF157P51786 506 aaPredicted RBP19.78■□□□□ 0.76
ATG4B-203ENST00000400772 LBX1P52954 281 aa19.78■□□□□ 0.76
ATG4B-203ENST00000400772 FKBP1BP68106 108 aa19.78■□□□□ 0.76
ATG4B-203ENST00000400772 ZKSCAN2Q63HK3 967 aa19.78■□□□□ 0.76
ATG4B-203ENST00000400772 APOBEC3FQ8IUX4 373 aaKnown RBP19.78■□□□□ 0.76
ATG4B-203ENST00000400772 TMEM57Q8N5G2 664 aa19.78■□□□□ 0.76
ATG4B-203ENST00000400772 LPIN2Q92539 896 aa19.78■□□□□ 0.76
ATG4B-203ENST00000400772 PRDM10Q9NQV6 1147 aa19.78■□□□□ 0.76
ATG4B-203ENST00000400772 CHAF1AQ13111 956 aaPredicted RBP19.77■□□□□ 0.76
ATG4B-203ENST00000400772 NOGQ13253 232 aa19.77■□□□□ 0.76
ATG4B-203ENST00000400772 MTX1Q13505 466 aa19.77■□□□□ 0.76
ATG4B-203ENST00000400772 TTF2Q9UNY4 1162 aaKnown RBP19.77■□□□□ 0.76
ATG4B-203ENST00000400772 SLC5A1P13866 664 aa19.76■□□□□ 0.75
ATG4B-203ENST00000400772 IL15P40933 162 aaPredicted RBP19.76■□□□□ 0.75
ATG4B-203ENST00000400772 CCDC102AQ96A19 550 aa19.76■□□□□ 0.75
ATG4B-203ENST00000400772 DEFB129Q9H1M3 183 aa19.76■□□□□ 0.75
ATG4B-203ENST00000400772 CEP126Q9P2H0 1117 aa19.76■□□□□ 0.75
ATG4B-203ENST00000400772 SERPINA10Q9UK55 444 aa19.76■□□□□ 0.75
ATG4B-203ENST00000400772 PAPPA2Q9BXP8 1791 aa19.75■□□□□ 0.75
ATG4B-203ENST00000400772 CLRN2A0PK11 232 aa19.75■□□□□ 0.75
ATG4B-203ENST00000400772 UBE2Q2LH0YL09 131 aa19.75■□□□□ 0.75
ATG4B-203ENST00000400772 SRGAP3O43295 1099 aa19.75■□□□□ 0.75
ATG4B-203ENST00000400772 FRAT2O75474 233 aaPredicted RBP19.75■□□□□ 0.75
ATG4B-203ENST00000400772 SLC10A3P09131 477 aa19.75■□□□□ 0.75
ATG4B-203ENST00000400772 RBM5P52756 815 aaKnown RBP eCLIP19.75■□□□□ 0.75
ATG4B-203ENST00000400772 TNS4Q8IZW8 715 aa19.75■□□□□ 0.75
ATG4B-203ENST00000400772 GNAI2P04899 355 aa19.74■□□□□ 0.75
ATG4B-203ENST00000400772 TBC1D22AQ8WUA7 517 aa19.74■□□□□ 0.75
ATG4B-203ENST00000400772 BEGAINQ9BUH8 593 aa19.74■□□□□ 0.75
ATG4B-203ENST00000400772 MYO1BO43795 1136 aa19.73■□□□□ 0.75
ATG4B-203ENST00000400772 CRKP46108 304 aa19.73■□□□□ 0.75
ATG4B-203ENST00000400772 KIF23Q02241 960 aaPredicted RBP19.73■□□□□ 0.75
ATG4B-203ENST00000400772 ATP2B3Q16720 1220 aa19.73■□□□□ 0.75
ATG4B-203ENST00000400772 RASAL3Q86YV0 1011 aa19.73■□□□□ 0.75
ATG4B-203ENST00000400772 DZIP1LQ8IYY4 767 aaKnown RBP19.73■□□□□ 0.75
ATG4B-203ENST00000400772 TSKSQ9UJT2 592 aa19.73■□□□□ 0.75
ATG4B-203ENST00000400772 PNMA6EA0A0J9YXQ4 647 aa19.72■□□□□ 0.75
ATG4B-203ENST00000400772 RLBP1P12271 317 aa19.72■□□□□ 0.75
ATG4B-203ENST00000400772 SPDYE2Q495Y8 402 aa19.72■□□□□ 0.75
ATG4B-203ENST00000400772 ARAP2Q8WZ64 1704 aa19.72■□□□□ 0.75
ATG4B-203ENST00000400772 TDRD3Q9H7E2 651 aaKnown RBP19.72■□□□□ 0.75
ATG4B-203ENST00000400772 VEZTQ9HBM0 779 aa19.72■□□□□ 0.75
ATG4B-203ENST00000400772 ZNF70Q9UC06 446 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-203ENST00000400772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-203ENST00000400772 COL1A1P02452 1464 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms