RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 L3MBTL3Q96JM7 780 aaPredicted RBP21.31■■□□□ 1
CSNK1D-204ENST00000398519 ZBTB22O15209 634 aa21.3■■□□□ 1
CSNK1D-204ENST00000398519 IFIT2P09913 472 aaKnown RBP21.3■■□□□ 1
CSNK1D-204ENST00000398519 ARID4AP29374 1257 aaPredicted RBP21.3■■□□□ 1
CSNK1D-204ENST00000398519 GMPSP49915 693 aaPredicted RBP21.3■■□□□ 1
CSNK1D-204ENST00000398519 RASGRF1Q13972 1273 aa21.3■■□□□ 1
CSNK1D-204ENST00000398519 SEMA3EO15041 775 aa21.29■■□□□ 1
CSNK1D-204ENST00000398519 SCNN1DP51172 638 aa21.29■■□□□ 1
CSNK1D-204ENST00000398519 CHAF1AQ13111 956 aaPredicted RBP21.29■■□□□ 1
CSNK1D-204ENST00000398519 CCDC158Q5M9N0 1113 aa21.29■■□□□ 1
CSNK1D-204ENST00000398519 ANKRD45Q5TZF3 282 aa21.29■■□□□ 1
CSNK1D-204ENST00000398519 TTC39AQ5SRH9 613 aa21.28■■□□□ 1
CSNK1D-204ENST00000398519 CERS5Q8N5B7 392 aa21.28■■□□□ 1
CSNK1D-204ENST00000398519 GMLQ99445 158 aa21.28■■□□□ 1
CSNK1D-204ENST00000398519 POTECB2RU33 542 aa21.27■■□□□ 1
CSNK1D-204ENST00000398519 RPS12P25398 132 aaKnown RBP21.27■■□□□ 1
CSNK1D-204ENST00000398519 SCARF1Q14162 830 aa21.27■■□□□ 1
CSNK1D-204ENST00000398519 B4GALNT3Q6L9W6 998 aa21.27■■□□□ 1
CSNK1D-204ENST00000398519 ZNF784Q8NCA9 323 aaPredicted RBP21.27■■□□□ 1
CSNK1D-204ENST00000398519 DENND2AQ9ULE3 1009 aa21.27■■□□□ 1
CSNK1D-204ENST00000398519 UQCRFS1P1P0C7P4 283 aa21.27■□□□□ 0.99
CSNK1D-204ENST00000398519 MCAMP43121 646 aa21.27■□□□□ 0.99
CSNK1D-204ENST00000398519 FKBP1AP62942 108 aaKnown RBP21.27■□□□□ 0.99
CSNK1D-204ENST00000398519 AGBL3Q8NEM8 1001 aa21.27■□□□□ 0.99
CSNK1D-204ENST00000398519 ZNF512BQ96KM6 892 aaPredicted RBP21.27■□□□□ 0.99
CSNK1D-204ENST00000398519 NMRK2Q9NPI5 230 aa21.27■□□□□ 0.99
CSNK1D-204ENST00000398519 GPRC5DQ9NZD1 345 aa21.27■□□□□ 0.99
CSNK1D-204ENST00000398519 HMG20BQ9P0W2 317 aa21.27■□□□□ 0.99
CSNK1D-204ENST00000398519 MYO3BQ8WXR4 1341 aa21.27■□□□□ 0.99
CSNK1D-204ENST00000398519 SCN4AP35499 1836 aa21.26■□□□□ 0.99
CSNK1D-204ENST00000398519 PDS5AQ29RF7 1337 aaKnown RBP21.26■□□□□ 0.99
CSNK1D-204ENST00000398519 MFSD14BQ5SR56 506 aa21.26■□□□□ 0.99
CSNK1D-204ENST00000398519 PI16Q6UXB8 463 aa21.26■□□□□ 0.99
CSNK1D-204ENST00000398519 C16orf71Q8IYS4 520 aaPredicted RBP21.26■□□□□ 0.99
CSNK1D-204ENST00000398519 DPF2Q92785 391 aa21.26■□□□□ 0.99
CSNK1D-204ENST00000398519 RRAGCQ9HB90 399 aa21.26■□□□□ 0.99
CSNK1D-204ENST00000398519 GPBP1L1Q9HC44 474 aaPredicted RBP21.26■□□□□ 0.99
CSNK1D-204ENST00000398519 SHTN1A0MZ66 631 aa21.25■□□□□ 0.99
CSNK1D-204ENST00000398519 NUCB1Q02818 461 aa21.25■□□□□ 0.99
CSNK1D-204ENST00000398519 SPATA5Q8NB90 893 aa21.25■□□□□ 0.99
CSNK1D-204ENST00000398519 AKAP11Q9UKA4 1901 aa21.25■□□□□ 0.99
CSNK1D-204ENST00000398519 EPS15P42566 896 aa21.24■□□□□ 0.99
CSNK1D-204ENST00000398519 ERICH6BQ5W0A0 696 aa21.24■□□□□ 0.99
CSNK1D-204ENST00000398519 WDR66Q8TBY9 1149 aa21.24■□□□□ 0.99
CSNK1D-204ENST00000398519 OTUD7AQ8TE49 926 aaPredicted RBP21.24■□□□□ 0.99
CSNK1D-204ENST00000398519 TBC1D22AQ8WUA7 517 aa21.24■□□□□ 0.99
CSNK1D-204ENST00000398519 ZBTB47Q9UFB7 747 aaPredicted RBP21.24■□□□□ 0.99
CSNK1D-204ENST00000398519 LMOD1P29536 600 aaPredicted RBP21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 GRIK5Q16478 980 aa21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 CHD1LQ86WJ1 897 aa21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 KIAA0825Q8IV33 1275 aa21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 MICALL2Q8IY33 904 aa21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 LNPKQ9C0E8 428 aa21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 CNOT7Q9UIV1 285 aaKnown RBP21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 HACL1Q9UJ83 578 aa21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 SALL1Q9NSC2 1324 aa21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 IQCA1LA6NCM1 817 aa21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 SNRKQ9NRH2 765 aa21.23■□□□□ 0.99
CSNK1D-204ENST00000398519 SALL3Q9BXA9 1300 aa21.22■□□□□ 0.99
CSNK1D-204ENST00000398519 USP17L8P0C7I0 530 aa21.22■□□□□ 0.99
CSNK1D-204ENST00000398519 VEGFAP15692 232 aaPredicted RBP21.22■□□□□ 0.99
CSNK1D-204ENST00000398519 F8W031 263 aaPredicted RBP21.21■□□□□ 0.99
CSNK1D-204ENST00000398519 TSHZ3Q63HK5 1081 aa21.21■□□□□ 0.99
CSNK1D-204ENST00000398519 CCDC136Q96JN2 1154 aa21.21■□□□□ 0.99
CSNK1D-204ENST00000398519 TAF1DQ9H5J8 278 aaPredicted RBP21.21■□□□□ 0.99
CSNK1D-204ENST00000398519 ECHDC1Q9NTX5 307 aa21.21■□□□□ 0.99
CSNK1D-204ENST00000398519 ATP5JP18859 108 aa21.2■□□□□ 0.98
CSNK1D-204ENST00000398519 EPHX2P34913 555 aa21.2■□□□□ 0.98
CSNK1D-204ENST00000398519 ZAP70P43403 619 aa21.2■□□□□ 0.98
CSNK1D-204ENST00000398519 ZNF280AP59817 542 aaPredicted RBP21.2■□□□□ 0.98
CSNK1D-204ENST00000398519 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.2■□□□□ 0.98
CSNK1D-204ENST00000398519 NDUFB9Q9Y6M9 179 aa21.2■□□□□ 0.98
CSNK1D-204ENST00000398519 H7C1D1 291 aa21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 EGFRP00533 1210 aa21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 PRDX5P30044 214 aa21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 GPATCH3Q96I76 525 aa21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 ADARB2Q9NS39 739 aaKnown RBP21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 CYP2E1P05181 493 aaPredicted RBP21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 MX1P20591 662 aa21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 TBC1D9Q6ZT07 1266 aa21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 CENPQQ7L2Z9 268 aaPredicted RBP21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 SAMD7Q7Z3H4 446 aa21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 OGFOD1Q8N543 542 aa21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 ABCF2Q9UG63 623 aa21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 TTF2Q9UNY4 1162 aaKnown RBP21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 SUGT1Q9Y2Z0 365 aa21.19■□□□□ 0.98
CSNK1D-204ENST00000398519 TTC41PQ6P2S7 1318 aa21.18■□□□□ 0.98
CSNK1D-204ENST00000398519 ADAMTSL1Q8N6G6 1762 aa21.18■□□□□ 0.98
CSNK1D-204ENST00000398519 KIF3CO14782 793 aa21.18■□□□□ 0.98
CSNK1D-204ENST00000398519 ZGPATQ8N5A5 531 aaKnown RBP21.18■□□□□ 0.98
CSNK1D-204ENST00000398519 TRPM4Q8TD43 1214 aa21.18■□□□□ 0.98
CSNK1D-204ENST00000398519 BOLA2Q9H3K6 86 aa21.18■□□□□ 0.98
CSNK1D-204ENST00000398519 LDHBP07195 334 aaKnown RBP21.17■□□□□ 0.98
CSNK1D-204ENST00000398519 TBC1D10BQ4KMP7 808 aaPredicted RBP21.17■□□□□ 0.98
CSNK1D-204ENST00000398519 MYOZ2Q9NPC6 264 aa21.17■□□□□ 0.98
CSNK1D-204ENST00000398519 PPP4R2Q9NY27 417 aa21.17■□□□□ 0.98
CSNK1D-204ENST00000398519 HDAC9Q9UKV0 1011 aa21.17■□□□□ 0.98
CSNK1D-204ENST00000398519 MMP14P50281 582 aa21.16■□□□□ 0.98
CSNK1D-204ENST00000398519 PI4K2BQ8TCG2 481 aa21.16■□□□□ 0.98
CSNK1D-204ENST00000398519 DNAJC2Q99543 621 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms