RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 FAM205AQ6ZU69 1335 aa19.48■□□□□ 0.71
MBD1-207ENST00000398488 CHAF1AQ13111 956 aaPredicted RBP19.47■□□□□ 0.71
MBD1-207ENST00000398488 SAMD7Q7Z3H4 446 aa19.47■□□□□ 0.71
MBD1-207ENST00000398488 VPS37DQ86XT2 251 aa19.47■□□□□ 0.71
MBD1-207ENST00000398488 RHPN1Q8TCX5 695 aa19.47■□□□□ 0.71
MBD1-207ENST00000398488 CCDC8Q9H0W5 538 aaPredicted RBP19.47■□□□□ 0.71
MBD1-207ENST00000398488 GPR108Q9NPR9 543 aa19.47■□□□□ 0.71
MBD1-207ENST00000398488 IQCA1LA6NCM1 817 aa19.46■□□□□ 0.71
MBD1-207ENST00000398488 LMOD1P29536 600 aaPredicted RBP19.46■□□□□ 0.71
MBD1-207ENST00000398488 AGBL3Q8NEM8 1001 aa19.46■□□□□ 0.71
MBD1-207ENST00000398488 RPS12P25398 132 aaKnown RBP19.46■□□□□ 0.71
MBD1-207ENST00000398488 EAPPQ56P03 285 aaPredicted RBP19.46■□□□□ 0.71
MBD1-207ENST00000398488 DCTPP1Q9H773 170 aa19.46■□□□□ 0.71
MBD1-207ENST00000398488 DBNLQ9UJU6 430 aaKnown RBP19.46■□□□□ 0.71
MBD1-207ENST00000398488 ADAMTSL1Q8N6G6 1762 aa19.45■□□□□ 0.7
MBD1-207ENST00000398488 SMARCA5O60264 1052 aaPredicted RBP19.45■□□□□ 0.7
MBD1-207ENST00000398488 SCARF1Q14162 830 aa19.45■□□□□ 0.7
MBD1-207ENST00000398488 TBC1D10BQ4KMP7 808 aaPredicted RBP19.45■□□□□ 0.7
MBD1-207ENST00000398488 RBM26Q5T8P6 1007 aaKnown RBP19.45■□□□□ 0.7
MBD1-207ENST00000398488 KIAA0825Q8IV33 1275 aa19.45■□□□□ 0.7
MBD1-207ENST00000398488 ADARB2Q9NS39 739 aaKnown RBP19.45■□□□□ 0.7
MBD1-207ENST00000398488 TOMM70O94826 608 aa19.44■□□□□ 0.7
MBD1-207ENST00000398488 ZNF280AP59817 542 aaPredicted RBP19.44■□□□□ 0.7
MBD1-207ENST00000398488 BCL11AQ9H165 835 aa19.44■□□□□ 0.7
MBD1-207ENST00000398488 PCDHAC2Q9Y5I4 1007 aa19.44■□□□□ 0.7
MBD1-207ENST00000398488 ASTN2O75129 1339 aaPredicted RBP19.44■□□□□ 0.7
MBD1-207ENST00000398488 F8W031 263 aaPredicted RBP19.43■□□□□ 0.7
MBD1-207ENST00000398488 USP17L8P0C7I0 530 aa19.43■□□□□ 0.7
MBD1-207ENST00000398488 RASGRF1Q13972 1273 aa19.43■□□□□ 0.7
MBD1-207ENST00000398488 HSP90AB4PQ58FF6 505 aa19.43■□□□□ 0.7
MBD1-207ENST00000398488 MFSD14BQ5SR56 506 aa19.43■□□□□ 0.7
MBD1-207ENST00000398488 PI16Q6UXB8 463 aa19.43■□□□□ 0.7
MBD1-207ENST00000398488 ERC1Q8IUD2 1116 aa19.43■□□□□ 0.7
MBD1-207ENST00000398488 H7C1D1 291 aa19.42■□□□□ 0.7
MBD1-207ENST00000398488 RAB11FIP3O75154 756 aa19.42■□□□□ 0.7
MBD1-207ENST00000398488 FRAT2O75474 233 aaPredicted RBP19.42■□□□□ 0.7
MBD1-207ENST00000398488 AACSQ86V21 672 aa19.42■□□□□ 0.7
MBD1-207ENST00000398488 C16orf71Q8IYS4 520 aaPredicted RBP19.42■□□□□ 0.7
MBD1-207ENST00000398488 KIF1BPQ96EK5 621 aa19.42■□□□□ 0.7
MBD1-207ENST00000398488 IGHDP01880 384 aa19.41■□□□□ 0.7
MBD1-207ENST00000398488 FKBP1AP62942 108 aaKnown RBP19.41■□□□□ 0.7
MBD1-207ENST00000398488 RBM46Q8TBY0 533 aaKnown RBP19.41■□□□□ 0.7
MBD1-207ENST00000398488 AOX1Q06278 1338 aa19.41■□□□□ 0.7
MBD1-207ENST00000398488 USP50Q70EL3 339 aaPredicted RBP19.41■□□□□ 0.7
MBD1-207ENST00000398488 MYOZ2Q9NPC6 264 aa19.41■□□□□ 0.7
MBD1-207ENST00000398488 HMG20BQ9P0W2 317 aa19.41■□□□□ 0.7
MBD1-207ENST00000398488 MYO3BQ8WXR4 1341 aa19.4■□□□□ 0.7
MBD1-207ENST00000398488 ARID4AP29374 1257 aaPredicted RBP19.4■□□□□ 0.7
MBD1-207ENST00000398488 MCAMP43121 646 aa19.4■□□□□ 0.7
MBD1-207ENST00000398488 HDAC1Q13547 482 aaPredicted RBP19.4■□□□□ 0.7
MBD1-207ENST00000398488 KIF4BQ2VIQ3 1234 aa19.4■□□□□ 0.7
MBD1-207ENST00000398488 GORABQ5T7V8 394 aa19.4■□□□□ 0.7
MBD1-207ENST00000398488 MAP1SQ66K74 1059 aaPredicted RBP19.4■□□□□ 0.7
MBD1-207ENST00000398488 PNMA8AQ86V59 439 aaPredicted RBP19.4■□□□□ 0.7
MBD1-207ENST00000398488 LDHDQ86WU2 507 aa19.4■□□□□ 0.7
MBD1-207ENST00000398488 CLEC11AQ9Y240 323 aa19.4■□□□□ 0.7
MBD1-207ENST00000398488 MYH13Q9UKX3 1938 aa19.39■□□□□ 0.69
MBD1-207ENST00000398488 ZBTB22O15209 634 aa19.39■□□□□ 0.69
MBD1-207ENST00000398488 C1QTNF8P60827 252 aa19.39■□□□□ 0.69
MBD1-207ENST00000398488 FMR1Q06787 632 aaKnown RBP eCLIP19.39■□□□□ 0.69
MBD1-207ENST00000398488 CHADLQ6NUI6 762 aa19.39■□□□□ 0.69
MBD1-207ENST00000398488 DLK2Q6UY11 383 aa19.39■□□□□ 0.69
MBD1-207ENST00000398488 SNRKQ9NRH2 765 aa19.39■□□□□ 0.69
MBD1-207ENST00000398488 GNL3LQ9NVN8 582 aaKnown RBP19.39■□□□□ 0.69
MBD1-207ENST00000398488 NBPF9Q3BBW0 867 aa19.38■□□□□ 0.69
MBD1-207ENST00000398488 ZBED3Q96IU2 234 aaPredicted RBP19.38■□□□□ 0.69
MBD1-207ENST00000398488 LRRCC1Q9C099 1032 aa19.38■□□□□ 0.69
MBD1-207ENST00000398488 DENND2AQ9ULE3 1009 aa19.38■□□□□ 0.69
MBD1-207ENST00000398488 NDUFB9Q9Y6M9 179 aa19.38■□□□□ 0.69
MBD1-207ENST00000398488 SEMA3EO15041 775 aa19.37■□□□□ 0.69
MBD1-207ENST00000398488 PRDX5P30044 214 aa19.37■□□□□ 0.69
MBD1-207ENST00000398488 AAMPQ13685 434 aa19.37■□□□□ 0.69
MBD1-207ENST00000398488 TBC1D9Q6ZT07 1266 aa19.37■□□□□ 0.69
MBD1-207ENST00000398488 CLASRPQ8N2M8 674 aaKnown RBP19.37■□□□□ 0.69
MBD1-207ENST00000398488 PGAP2Q9UHJ9 254 aa19.37■□□□□ 0.69
MBD1-207ENST00000398488 TTF2Q9UNY4 1162 aaKnown RBP19.37■□□□□ 0.69
MBD1-207ENST00000398488 SCAF8Q9UPN6 1271 aaKnown RBP19.37■□□□□ 0.69
MBD1-207ENST00000398488 AKAP11Q9UKA4 1901 aa19.37■□□□□ 0.69
MBD1-207ENST00000398488 ITGBL1O95965 494 aaPredicted RBP19.36■□□□□ 0.69
MBD1-207ENST00000398488 TTC39AQ5SRH9 613 aa19.36■□□□□ 0.69
MBD1-207ENST00000398488 SPATA5Q8NB90 893 aa19.36■□□□□ 0.69
MBD1-207ENST00000398488 SMC1BQ8NDV3 1235 aa19.36■□□□□ 0.69
MBD1-207ENST00000398488 WDR66Q8TBY9 1149 aa19.36■□□□□ 0.69
MBD1-207ENST00000398488 WNT10BO00744 389 aa19.35■□□□□ 0.69
MBD1-207ENST00000398488 TBC1D22AQ8WUA7 517 aa19.35■□□□□ 0.69
MBD1-207ENST00000398488 SALL1Q9NSC2 1324 aa19.35■□□□□ 0.69
MBD1-207ENST00000398488 UQCRFS1P1P0C7P4 283 aa19.35■□□□□ 0.69
MBD1-207ENST00000398488 CFAP100Q494V2 611 aa19.35■□□□□ 0.69
MBD1-207ENST00000398488 CCDC158Q5M9N0 1113 aa19.35■□□□□ 0.69
MBD1-207ENST00000398488 CNTROBQ8N137 903 aa19.35■□□□□ 0.69
MBD1-207ENST00000398488 OGFOD1Q8N543 542 aa19.35■□□□□ 0.69
MBD1-207ENST00000398488 OTUD7AQ8TE49 926 aaPredicted RBP19.35■□□□□ 0.69
MBD1-207ENST00000398488 ZNF384Q8TF68 577 aa19.35■□□□□ 0.69
MBD1-207ENST00000398488 PRMT6Q96LA8 375 aaPredicted RBP19.35■□□□□ 0.69
MBD1-207ENST00000398488 PDS5AQ29RF7 1337 aaKnown RBP19.34■□□□□ 0.69
MBD1-207ENST00000398488 TRAF5O00463 557 aa19.34■□□□□ 0.69
MBD1-207ENST00000398488 IFIT2P09913 472 aaKnown RBP19.34■□□□□ 0.69
MBD1-207ENST00000398488 ZAP70P43403 619 aa19.34■□□□□ 0.69
MBD1-207ENST00000398488 ZNF512BQ96KM6 892 aaPredicted RBP19.34■□□□□ 0.69
MBD1-207ENST00000398488 GLIS2Q9BZE0 524 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms