RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 VPS37DQ86XT2 251 aa17.4■□□□□ 0.38
SEC13-204ENST00000397099 C2orf69Q8N8R5 385 aa17.4■□□□□ 0.38
SEC13-204ENST00000397099 EYA2O00167 538 aa17.39■□□□□ 0.37
SEC13-204ENST00000397099 CIAO1O76071 339 aa17.39■□□□□ 0.37
SEC13-204ENST00000397099 TRIM27P14373 513 aa17.39■□□□□ 0.37
SEC13-204ENST00000397099 ANGEL2Q5VTE6 544 aaKnown RBP17.39■□□□□ 0.37
SEC13-204ENST00000397099 ZKSCAN2Q63HK3 967 aa17.39■□□□□ 0.37
SEC13-204ENST00000397099 FRAT1Q92837 279 aaPredicted RBP17.39■□□□□ 0.37
SEC13-204ENST00000397099 MXD3Q9BW11 206 aa17.39■□□□□ 0.37
SEC13-204ENST00000397099 PUS3Q9BZE2 481 aaKnown RBP17.39■□□□□ 0.37
SEC13-204ENST00000397099 GBA2Q9HCG7 927 aaPredicted RBP17.39■□□□□ 0.37
SEC13-204ENST00000397099 FAM205AQ6ZU69 1335 aa17.39■□□□□ 0.37
SEC13-204ENST00000397099 THSD7BQ9C0I4 1608 aa17.39■□□□□ 0.37
SEC13-204ENST00000397099 BCAR3O75815 825 aa17.38■□□□□ 0.37
SEC13-204ENST00000397099 IFIT1P09914 478 aaKnown RBP17.38■□□□□ 0.37
SEC13-204ENST00000397099 PTPN12Q05209 780 aaKnown RBP17.38■□□□□ 0.37
SEC13-204ENST00000397099 PUM3Q15397 648 aaKnown RBP17.38■□□□□ 0.37
SEC13-204ENST00000397099 MTMR14Q8NCE2 650 aa17.38■□□□□ 0.37
SEC13-204ENST00000397099 TDRD7Q8NHU6 1098 aaKnown RBP17.38■□□□□ 0.37
SEC13-204ENST00000397099 SNAP23O00161 211 aa17.37■□□□□ 0.37
SEC13-204ENST00000397099 RFX5P48382 616 aaPredicted RBP17.37■□□□□ 0.37
SEC13-204ENST00000397099 FKBP1BP68106 108 aa17.37■□□□□ 0.37
SEC13-204ENST00000397099 LRRC24Q50LG9 513 aa17.37■□□□□ 0.37
SEC13-204ENST00000397099 VGLL2Q8N8G2 317 aa17.37■□□□□ 0.37
SEC13-204ENST00000397099 TBC1D22AQ8WUA7 517 aa17.37■□□□□ 0.37
SEC13-204ENST00000397099 CDCA5Q96FF9 252 aa17.37■□□□□ 0.37
SEC13-204ENST00000397099 FAM84BQ96KN1 310 aaPredicted RBP17.37■□□□□ 0.37
SEC13-204ENST00000397099 LRRFIP2Q9Y608 721 aaKnown RBP17.37■□□□□ 0.37
SEC13-204ENST00000397099 ECM29Q5VYK3 1845 aa17.36■□□□□ 0.37
SEC13-204ENST00000397099 WNT10BO00744 389 aa17.36■□□□□ 0.37
SEC13-204ENST00000397099 MYO1BO43795 1136 aa17.36■□□□□ 0.37
SEC13-204ENST00000397099 GNAI2P04899 355 aa17.36■□□□□ 0.37
SEC13-204ENST00000397099 IL15P40933 162 aaPredicted RBP17.36■□□□□ 0.37
SEC13-204ENST00000397099 MTX1Q13505 466 aa17.36■□□□□ 0.37
SEC13-204ENST00000397099 FBXO33Q7Z6M2 555 aa17.36■□□□□ 0.37
SEC13-204ENST00000397099 APOBEC3FQ8IUX4 373 aaKnown RBP17.36■□□□□ 0.37
SEC13-204ENST00000397099 KIAA0825Q8IV33 1275 aa17.36■□□□□ 0.37
SEC13-204ENST00000397099 LPIN2Q92539 896 aa17.36■□□□□ 0.37
SEC13-204ENST00000397099 MEIS3Q99687 375 aa17.36■□□□□ 0.37
SEC13-204ENST00000397099 TSKSQ9UJT2 592 aa17.36■□□□□ 0.37
SEC13-204ENST00000397099 ARAP2Q8WZ64 1704 aa17.35■□□□□ 0.37
SEC13-204ENST00000397099 FRAT2O75474 233 aaPredicted RBP17.35■□□□□ 0.37
SEC13-204ENST00000397099 MS4A1P11836 297 aa17.35■□□□□ 0.37
SEC13-204ENST00000397099 SLC5A1P13866 664 aa17.35■□□□□ 0.37
SEC13-204ENST00000397099 GYG1P46976 350 aa17.35■□□□□ 0.37
SEC13-204ENST00000397099 ZNF157P51786 506 aaPredicted RBP17.35■□□□□ 0.37
SEC13-204ENST00000397099 NOGQ13253 232 aa17.35■□□□□ 0.37
SEC13-204ENST00000397099 DLGAP5Q15398 846 aa17.35■□□□□ 0.37
SEC13-204ENST00000397099 RGMBQ6NW40 437 aa17.35■□□□□ 0.37
SEC13-204ENST00000397099 FTSJ3Q8IY81 847 aaKnown RBP17.35■□□□□ 0.37
SEC13-204ENST00000397099 COPRSQ9NQ92 184 aa17.35■□□□□ 0.37
SEC13-204ENST00000397099 CEP126Q9P2H0 1117 aa17.35■□□□□ 0.37
SEC13-204ENST00000397099 COL1A1P02452 1464 aaPredicted RBP17.35■□□□□ 0.37
SEC13-204ENST00000397099 CA12O43570 354 aa17.34■□□□□ 0.37
SEC13-204ENST00000397099 NF2P35240 595 aa17.34■□□□□ 0.37
SEC13-204ENST00000397099 SCAF8Q9UPN6 1271 aaKnown RBP17.34■□□□□ 0.37
SEC13-204ENST00000397099 SUGT1Q9Y2Z0 365 aa17.34■□□□□ 0.37
SEC13-204ENST00000397099 ZBTB22O15209 634 aa17.33■□□□□ 0.36
SEC13-204ENST00000397099 FGFR2P21802 821 aa17.33■□□□□ 0.36
SEC13-204ENST00000397099 NBPF9Q3BBW0 867 aa17.33■□□□□ 0.36
SEC13-204ENST00000397099 MFSD14BQ5SR56 506 aa17.33■□□□□ 0.36
SEC13-204ENST00000397099 KLHDC4Q8TBB5 520 aa17.33■□□□□ 0.36
SEC13-204ENST00000397099 CCDC102AQ96A19 550 aa17.33■□□□□ 0.36
SEC13-204ENST00000397099 ZBED3Q96IU2 234 aaPredicted RBP17.33■□□□□ 0.36
SEC13-204ENST00000397099 SERPINA10Q9UK55 444 aa17.33■□□□□ 0.36
SEC13-204ENST00000397099 PPP2R3BQ9Y5P8 575 aa17.33■□□□□ 0.36
SEC13-204ENST00000397099 MYH13Q9UKX3 1938 aa17.33■□□□□ 0.36
SEC13-204ENST00000397099 SRGAP3O43295 1099 aa17.32■□□□□ 0.36
SEC13-204ENST00000397099 ATG9AQ7Z3C6 839 aa17.32■□□□□ 0.36
SEC13-204ENST00000397099 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
SEC13-204ENST00000397099 CERS5Q8N5B7 392 aa17.32■□□□□ 0.36
SEC13-204ENST00000397099 GNL3LQ9NVN8 582 aaKnown RBP17.32■□□□□ 0.36
SEC13-204ENST00000397099 PAPPA2Q9BXP8 1791 aa17.31■□□□□ 0.36
SEC13-204ENST00000397099 MAST3O60307 1309 aa17.31■□□□□ 0.36
SEC13-204ENST00000397099 HDLBPQ00341 1268 aaKnown RBP17.31■□□□□ 0.36
SEC13-204ENST00000397099 CLUAP1Q96AJ1 413 aa17.31■□□□□ 0.36
SEC13-204ENST00000397099 ZIC5Q96T25 663 aa17.31■□□□□ 0.36
SEC13-204ENST00000397099 AKAP2Q9Y2D5 859 aa17.31■□□□□ 0.36
SEC13-204ENST00000397099 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
SEC13-204ENST00000397099 SEMA3EO15041 775 aa17.3■□□□□ 0.36
SEC13-204ENST00000397099 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
SEC13-204ENST00000397099 TTLL12Q14166 644 aaPredicted RBP17.3■□□□□ 0.36
SEC13-204ENST00000397099 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
SEC13-204ENST00000397099 PRAMEF18Q5VWM3 479 aa17.3■□□□□ 0.36
SEC13-204ENST00000397099 WDR66Q8TBY9 1149 aa17.3■□□□□ 0.36
SEC13-204ENST00000397099 MRIQ9BWK5 157 aa17.3■□□□□ 0.36
SEC13-204ENST00000397099 SIL1Q9H173 461 aa17.3■□□□□ 0.36
SEC13-204ENST00000397099 FAM155AB1AL88 458 aaPredicted RBP17.29■□□□□ 0.36
SEC13-204ENST00000397099 TNFAIP1Q13829 316 aa17.29■□□□□ 0.36
SEC13-204ENST00000397099 CFAP100Q494V2 611 aa17.29■□□□□ 0.36
SEC13-204ENST00000397099 REM2Q8IYK8 340 aaPredicted RBP17.29■□□□□ 0.36
SEC13-204ENST00000397099 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
SEC13-204ENST00000397099 TTF2Q9UNY4 1162 aaKnown RBP17.29■□□□□ 0.36
SEC13-204ENST00000397099 F8W031 263 aaPredicted RBP17.28■□□□□ 0.36
SEC13-204ENST00000397099 SLC10A3P09131 477 aa17.28■□□□□ 0.36
SEC13-204ENST00000397099 BCAMP50895 628 aa17.28■□□□□ 0.36
SEC13-204ENST00000397099 RBM5P52756 815 aaKnown RBP eCLIP17.28■□□□□ 0.36
SEC13-204ENST00000397099 KIF23Q02241 960 aaPredicted RBP17.28■□□□□ 0.36
SEC13-204ENST00000397099 JAG2Q9Y219 1238 aa17.28■□□□□ 0.36
SEC13-204ENST00000397099 MOB2Q70IA6 237 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms