RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 PLEKHM2Q8IWE5 1019 aa13.09□□□□□ -0.31
NUP98-205ENST00000397007 CENPQQ7L2Z9 268 aaPredicted RBP13.08□□□□□ -0.32
NUP98-205ENST00000397007 GPC2Q8N158 579 aa13.08□□□□□ -0.32
NUP98-205ENST00000397007 SUGT1Q9Y2Z0 365 aa13.08□□□□□ -0.32
NUP98-205ENST00000397007 SLC5A1P13866 664 aa13.08□□□□□ -0.32
NUP98-205ENST00000397007 CHD1LQ86WJ1 897 aa13.08□□□□□ -0.32
NUP98-205ENST00000397007 HMG20BQ9P0W2 317 aa13.08□□□□□ -0.32
NUP98-205ENST00000397007 GAKO14976 1311 aa13.08□□□□□ -0.32
NUP98-205ENST00000397007 HAUS7Q99871 368 aa13.08□□□□□ -0.32
NUP98-205ENST00000397007 ANKIB1Q9P2G1 1089 aa13.08□□□□□ -0.32
NUP98-205ENST00000397007 TCRBV5S4A2TA0A5A2 114 aa13.07□□□□□ -0.32
NUP98-205ENST00000397007 SMARCA5O60264 1052 aaPredicted RBP13.07□□□□□ -0.32
NUP98-205ENST00000397007 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
NUP98-205ENST00000397007 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
NUP98-205ENST00000397007 TMED8Q6PL24 325 aaPredicted RBP13.07□□□□□ -0.32
NUP98-205ENST00000397007 DPF2Q92785 391 aa13.07□□□□□ -0.32
NUP98-205ENST00000397007 GLTPD2A6NH11 291 aa13.07□□□□□ -0.32
NUP98-205ENST00000397007 HIBADHP31937 336 aaKnown RBP13.07□□□□□ -0.32
NUP98-205ENST00000397007 ARHGAP27Q6ZUM4 889 aa13.07□□□□□ -0.32
NUP98-205ENST00000397007 AGBL3Q8NEM8 1001 aa13.07□□□□□ -0.32
NUP98-205ENST00000397007 FAM163AQ96GL9 167 aaPredicted RBP13.07□□□□□ -0.32
NUP98-205ENST00000397007 PPP4R2Q9NY27 417 aa13.07□□□□□ -0.32
NUP98-205ENST00000397007 PPIP5K2O43314 1243 aa13.06□□□□□ -0.32
NUP98-205ENST00000397007 CYP2E1P05181 493 aaPredicted RBP13.06□□□□□ -0.32
NUP98-205ENST00000397007 SSC5DA1L4H1 1573 aa13.06□□□□□ -0.32
NUP98-205ENST00000397007 PSMD14O00487 310 aa13.06□□□□□ -0.32
NUP98-205ENST00000397007 RPS12P25398 132 aaKnown RBP13.06□□□□□ -0.32
NUP98-205ENST00000397007 RSBN1LQ6PCB5 846 aaPredicted RBP13.06□□□□□ -0.32
NUP98-205ENST00000397007 ZNF804AQ7Z570 1209 aa13.06□□□□□ -0.32
NUP98-205ENST00000397007 IFIT1P09914 478 aaKnown RBP13.05□□□□□ -0.32
NUP98-205ENST00000397007 GPR162Q16538 588 aa13.05□□□□□ -0.32
NUP98-205ENST00000397007 TAF7LQ5H9L4 462 aa13.05□□□□□ -0.32
NUP98-205ENST00000397007 KLHL34Q8N239 644 aa13.05□□□□□ -0.32
NUP98-205ENST00000397007 DBNDD1Q9H9R9 158 aa13.05□□□□□ -0.32
NUP98-205ENST00000397007 MYO3BQ8WXR4 1341 aa13.05□□□□□ -0.32
NUP98-205ENST00000397007 PTPRFP10586 1907 aa13.05□□□□□ -0.32
NUP98-205ENST00000397007 BAZ2AQ9UIF9 1905 aaKnown RBP13.05□□□□□ -0.32
NUP98-205ENST00000397007 PDE1AP54750 535 aa13.04□□□□□ -0.32
NUP98-205ENST00000397007 IL1RAPL2Q9NP60 686 aa13.04□□□□□ -0.32
NUP98-205ENST00000397007 PARP14Q460N5 1801 aa13.04□□□□□ -0.32
NUP98-205ENST00000397007 HDLBPQ00341 1268 aaKnown RBP13.04□□□□□ -0.32
NUP98-205ENST00000397007 MYH8P13535 1937 aa13.04□□□□□ -0.32
NUP98-205ENST00000397007 DOCK1Q14185 1865 aa13.04□□□□□ -0.32
NUP98-205ENST00000397007 USP17L3A6NCW0 530 aa13.04□□□□□ -0.32
NUP98-205ENST00000397007 USP17L4A6NCW7 530 aa13.04□□□□□ -0.32
NUP98-205ENST00000397007 GSPT1P15170 499 aaKnown RBP13.04□□□□□ -0.32
NUP98-205ENST00000397007 USP17L1Q7RTZ2 530 aa13.04□□□□□ -0.32
NUP98-205ENST00000397007 ZC3H12CQ9C0D7 883 aaKnown RBP13.03□□□□□ -0.32
NUP98-205ENST00000397007 RNF181Q9P0P0 153 aa13.03□□□□□ -0.32
NUP98-205ENST00000397007 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
NUP98-205ENST00000397007 ATRNL1Q5VV63 1379 aa13.03□□□□□ -0.32
NUP98-205ENST00000397007 UQCRFS1P1P0C7P4 283 aa13.03□□□□□ -0.32
NUP98-205ENST00000397007 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
NUP98-205ENST00000397007 AACSQ86V21 672 aa13.03□□□□□ -0.32
NUP98-205ENST00000397007 SPATA5Q8NB90 893 aa13.03□□□□□ -0.32
NUP98-205ENST00000397007 WWC3Q9ULE0 1092 aa13.03□□□□□ -0.32
NUP98-205ENST00000397007 DENND2AQ9ULE3 1009 aa13.03□□□□□ -0.32
NUP98-205ENST00000397007 CCDC8Q9H0W5 538 aaPredicted RBP13.03□□□□□ -0.32
NUP98-205ENST00000397007 PI16Q6UXB8 463 aa13.02□□□□□ -0.32
NUP98-205ENST00000397007 NIM1KQ8IY84 436 aa13.02□□□□□ -0.32
NUP98-205ENST00000397007 CLASRPQ8N2M8 674 aaKnown RBP13.02□□□□□ -0.32
NUP98-205ENST00000397007 PIH1D3Q9NQM4 214 aaKnown RBP13.02□□□□□ -0.32
NUP98-205ENST00000397007 GPRC5DQ9NZD1 345 aa13.02□□□□□ -0.32
NUP98-205ENST00000397007 C6orf229H3BNL8 230 aa13.02□□□□□ -0.33
NUP98-205ENST00000397007 LARGE2Q8N3Y3 721 aa13.02□□□□□ -0.33
NUP98-205ENST00000397007 ECHDC1Q9NTX5 307 aa13.02□□□□□ -0.33
NUP98-205ENST00000397007 RPAP1Q9BWH6 1393 aaPredicted RBP13.02□□□□□ -0.33
NUP98-205ENST00000397007 LOC285556D6RIA3 1793 aa13.02□□□□□ -0.33
NUP98-205ENST00000397007 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
NUP98-205ENST00000397007 MX1P20591 662 aa13.01□□□□□ -0.33
NUP98-205ENST00000397007 HIRAP54198 1017 aaPredicted RBP13.01□□□□□ -0.33
NUP98-205ENST00000397007 NSUN4Q96CB9 384 aaKnown RBP13.01□□□□□ -0.33
NUP98-205ENST00000397007 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
NUP98-205ENST00000397007 FOXP2O15409 715 aa13.01□□□□□ -0.33
NUP98-205ENST00000397007 ADGRA1Q86SQ6 560 aa13.01□□□□□ -0.33
NUP98-205ENST00000397007 MXD3Q9BW11 206 aa13.01□□□□□ -0.33
NUP98-205ENST00000397007 MKRN1Q9UHC7 482 aaKnown RBP13.01□□□□□ -0.33
NUP98-205ENST00000397007 CAVIN4Q5BKX8 364 aa13□□□□□ -0.33
NUP98-205ENST00000397007 CIAPIN1Q6FI81 312 aa13□□□□□ -0.33
NUP98-205ENST00000397007 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
NUP98-205ENST00000397007 CNTNAP1P78357 1384 aa13□□□□□ -0.33
NUP98-205ENST00000397007 KIF3CO14782 793 aa13□□□□□ -0.33
NUP98-205ENST00000397007 EGFRP00533 1210 aa13□□□□□ -0.33
NUP98-205ENST00000397007 HHIPL2Q6UWX4 724 aa13□□□□□ -0.33
NUP98-205ENST00000397007 TBC1D22AQ8WUA7 517 aa13□□□□□ -0.33
NUP98-205ENST00000397007 ANTXR1Q9H6X2 564 aa13□□□□□ -0.33
NUP98-205ENST00000397007 ZAP70P43403 619 aa13□□□□□ -0.33
NUP98-205ENST00000397007 WDR66Q8TBY9 1149 aa13□□□□□ -0.33
NUP98-205ENST00000397007 ZDHHC15Q96MV8 337 aa13□□□□□ -0.33
NUP98-205ENST00000397007 NPM3O75607 178 aaKnown RBP12.99□□□□□ -0.33
NUP98-205ENST00000397007 TNIP1Q15025 636 aa12.99□□□□□ -0.33
NUP98-205ENST00000397007 APOBEC3HQ6NTF7 200 aaKnown RBP12.99□□□□□ -0.33
NUP98-205ENST00000397007 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
NUP98-205ENST00000397007 RHBDL3P58872 404 aa12.99□□□□□ -0.33
NUP98-205ENST00000397007 TTC22Q5TAA0 569 aa12.99□□□□□ -0.33
NUP98-205ENST00000397007 DDNO94850 711 aaPredicted RBP12.98□□□□□ -0.33
NUP98-205ENST00000397007 GMPSP49915 693 aaPredicted RBP12.98□□□□□ -0.33
NUP98-205ENST00000397007 PPP4CP60510 307 aa12.98□□□□□ -0.33
NUP98-205ENST00000397007 ANKRD45Q5TZF3 282 aa12.98□□□□□ -0.33
NUP98-205ENST00000397007 TTLL5Q6EMB2 1281 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms