RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 NLRP3Q96P20 1036 aa19.03■□□□□ 0.64
SNX6-202ENST00000396526 ZNF532Q9HCE3 1301 aa19.03■□□□□ 0.64
SNX6-202ENST00000396526 HAND2P61296 217 aa19.03■□□□□ 0.64
SNX6-202ENST00000396526 CHRNDQ07001 517 aa19.03■□□□□ 0.64
SNX6-202ENST00000396526 ST3GAL1Q11201 340 aa19.03■□□□□ 0.64
SNX6-202ENST00000396526 TPTE2Q6XPS3 522 aa19.03■□□□□ 0.64
SNX6-202ENST00000396526 TRIM44Q96DX7 344 aaPredicted RBP19.03■□□□□ 0.64
SNX6-202ENST00000396526 TTLL5Q6EMB2 1281 aa19.02■□□□□ 0.64
SNX6-202ENST00000396526 VPS37DQ86XT2 251 aa19.02■□□□□ 0.64
SNX6-202ENST00000396526 SCAND2PQ9GZW5 306 aaPredicted RBP19.02■□□□□ 0.64
SNX6-202ENST00000396526 PIH1D3Q9NQM4 214 aaKnown RBP19.02■□□□□ 0.64
SNX6-202ENST00000396526 GNPATO15228 680 aa19.02■□□□□ 0.64
SNX6-202ENST00000396526 CAVIN4Q5BKX8 364 aa19.02■□□□□ 0.64
SNX6-202ENST00000396526 NBPF5PQ86XG9 351 aaPredicted RBP19.02■□□□□ 0.64
SNX6-202ENST00000396526 RBM27Q9P2N5 1060 aaKnown RBP19.02■□□□□ 0.64
SNX6-202ENST00000396526 ERFEQ4G0M1 354 aa19.02■□□□□ 0.63
SNX6-202ENST00000396526 LRSAM1Q6UWE0 723 aa19.02■□□□□ 0.63
SNX6-202ENST00000396526 APOBRQ0VD83 1088 aa19.01■□□□□ 0.63
SNX6-202ENST00000396526 AGXT2Q9BYV1 514 aa19.01■□□□□ 0.63
SNX6-202ENST00000396526 NACAP1Q9BZK3 213 aa19.01■□□□□ 0.63
SNX6-202ENST00000396526 TMEM63CQ9P1W3 806 aa19.01■□□□□ 0.63
SNX6-202ENST00000396526 LRP2BPQ9P2M1 347 aa19.01■□□□□ 0.63
SNX6-202ENST00000396526 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.01■□□□□ 0.63
SNX6-202ENST00000396526 DNM1Q05193 864 aaKnown RBP19.01■□□□□ 0.63
SNX6-202ENST00000396526 UBE4AQ14139 1066 aa19.01■□□□□ 0.63
SNX6-202ENST00000396526 ZSCAN16Q9H4T2 348 aaPredicted RBP19.01■□□□□ 0.63
SNX6-202ENST00000396526 FBXL16Q8N461 479 aa19.01■□□□□ 0.63
SNX6-202ENST00000396526 GJD4Q96KN9 370 aaPredicted RBP19.01■□□□□ 0.63
SNX6-202ENST00000396526 GNAT2P19087 354 aa19■□□□□ 0.63
SNX6-202ENST00000396526 SLC10A5Q5PT55 438 aa19■□□□□ 0.63
SNX6-202ENST00000396526 BSDC1Q9NW68 430 aaPredicted RBP19■□□□□ 0.63
SNX6-202ENST00000396526 SYCE3A1L190 88 aa19■□□□□ 0.63
SNX6-202ENST00000396526 RASGRF1Q13972 1273 aa19■□□□□ 0.63
SNX6-202ENST00000396526 FERMT3Q86UX7 667 aa19■□□□□ 0.63
SNX6-202ENST00000396526 PRC1O43663 620 aa18.99■□□□□ 0.63
SNX6-202ENST00000396526 MAGEB6Q8N7X4 407 aa18.99■□□□□ 0.63
SNX6-202ENST00000396526 DDX11Q96FC9 970 aa18.99■□□□□ 0.63
SNX6-202ENST00000396526 PANK2Q9BZ23 570 aa18.99■□□□□ 0.63
SNX6-202ENST00000396526 SCRN1Q12765 414 aa18.99■□□□□ 0.63
SNX6-202ENST00000396526 COL9A3Q14050 684 aaPredicted RBP18.99■□□□□ 0.63
SNX6-202ENST00000396526 NAPBQ9H115 298 aa18.99■□□□□ 0.63
SNX6-202ENST00000396526 WDR19Q8NEZ3 1342 aa18.99■□□□□ 0.63
SNX6-202ENST00000396526 CICQ96RK0 1608 aaPredicted RBP18.99■□□□□ 0.63
SNX6-202ENST00000396526 CPLX1O14810 134 aa18.99■□□□□ 0.63
SNX6-202ENST00000396526 KCNQ4P56696 695 aa18.99■□□□□ 0.63
SNX6-202ENST00000396526 CCDC183Q5T5S1 534 aa18.99■□□□□ 0.63
SNX6-202ENST00000396526 HMGB2P26583 209 aaKnown RBP18.98■□□□□ 0.63
SNX6-202ENST00000396526 CDC37L1Q7L3B6 337 aa18.98■□□□□ 0.63
SNX6-202ENST00000396526 RFC4P35249 363 aa18.98■□□□□ 0.63
SNX6-202ENST00000396526 BCAMP50895 628 aa18.98■□□□□ 0.63
SNX6-202ENST00000396526 CPLX2Q6PUV4 134 aaKnown RBP18.98■□□□□ 0.63
SNX6-202ENST00000396526 KLHL34Q8N239 644 aa18.98■□□□□ 0.63
SNX6-202ENST00000396526 CFAP45Q9UL16 551 aa18.98■□□□□ 0.63
SNX6-202ENST00000396526 TRPC5Q9UL62 973 aaPredicted RBP18.98■□□□□ 0.63
SNX6-202ENST00000396526 MYH14Q7Z406 1995 aaKnown RBP18.98■□□□□ 0.63
SNX6-202ENST00000396526 PATL2C9JE40 543 aaKnown RBP18.98■□□□□ 0.63
SNX6-202ENST00000396526 GADD45BO75293 160 aaPredicted RBP18.98■□□□□ 0.63
SNX6-202ENST00000396526 CCT2P78371 535 aaKnown RBP18.98■□□□□ 0.63
SNX6-202ENST00000396526 ALX1Q15699 326 aa18.98■□□□□ 0.63
SNX6-202ENST00000396526 WWC3Q9ULE0 1092 aa18.98■□□□□ 0.63
SNX6-202ENST00000396526 JAK2O60674 1132 aa18.97■□□□□ 0.63
SNX6-202ENST00000396526 PDIA3P30101 505 aaKnown RBP18.97■□□□□ 0.63
SNX6-202ENST00000396526 CCDC173Q0VFZ6 552 aa18.97■□□□□ 0.63
SNX6-202ENST00000396526 TBC1D9BQ66K14 1250 aa18.97■□□□□ 0.63
SNX6-202ENST00000396526 SMARCC2Q8TAQ2 1214 aa18.97■□□□□ 0.63
SNX6-202ENST00000396526 TRAPPC3LQ5T215 181 aa18.97■□□□□ 0.63
SNX6-202ENST00000396526 CHST3Q7LGC8 479 aa18.97■□□□□ 0.63
SNX6-202ENST00000396526 STRBPQ96SI9 672 aaKnown RBP18.97■□□□□ 0.63
SNX6-202ENST00000396526 ANKRD2Q9GZV1 360 aa18.97■□□□□ 0.63
SNX6-202ENST00000396526 TSPY26PQ9H489 355 aa18.97■□□□□ 0.63
SNX6-202ENST00000396526 RREB1Q92766 1687 aa18.96■□□□□ 0.63
SNX6-202ENST00000396526 PTPDC1A2A3K4 754 aa18.96■□□□□ 0.63
SNX6-202ENST00000396526 RPS8P62241 208 aaKnown RBP18.96■□□□□ 0.63
SNX6-202ENST00000396526 NAA16Q6N069 864 aaPredicted RBP18.96■□□□□ 0.63
SNX6-202ENST00000396526 NSFL1CQ9UNZ2 370 aaKnown RBP18.96■□□□□ 0.63
SNX6-202ENST00000396526 ATRNO75882 1429 aa18.96■□□□□ 0.63
SNX6-202ENST00000396526 TPRNQ4KMQ1 711 aa18.96■□□□□ 0.63
SNX6-202ENST00000396526 NSUN7Q8NE18 718 aaKnown RBP18.96■□□□□ 0.63
SNX6-202ENST00000396526 SPATA32Q96LK8 384 aa18.96■□□□□ 0.63
SNX6-202ENST00000396526 SNAP23O00161 211 aa18.95■□□□□ 0.62
SNX6-202ENST00000396526 MBD4O95243 580 aa18.95■□□□□ 0.62
SNX6-202ENST00000396526 DENND2AQ9ULE3 1009 aa18.95■□□□□ 0.62
SNX6-202ENST00000396526 ELP1O95163 1332 aa18.95■□□□□ 0.62
SNX6-202ENST00000396526 KLF18A0A0U1RQI7 1052 aa18.95■□□□□ 0.62
SNX6-202ENST00000396526 EVCP57679 992 aa18.95■□□□□ 0.62
SNX6-202ENST00000396526 MB21D2Q8IYB1 491 aaPredicted RBP18.95■□□□□ 0.62
SNX6-202ENST00000396526 CNNM2Q9H8M5 875 aa18.95■□□□□ 0.62
SNX6-202ENST00000396526 ABCF2Q9UG63 623 aa18.95■□□□□ 0.62
SNX6-202ENST00000396526 RAI14Q9P0K7 980 aa18.95■□□□□ 0.62
SNX6-202ENST00000396526 ZNF831Q5JPB2 1677 aa18.94■□□□□ 0.62
SNX6-202ENST00000396526 DTNBO60941 627 aa18.94■□□□□ 0.62
SNX6-202ENST00000396526 TDO2P48775 406 aa18.94■□□□□ 0.62
SNX6-202ENST00000396526 CERKQ8TCT0 537 aa18.94■□□□□ 0.62
SNX6-202ENST00000396526 TMEM87BQ96K49 555 aa18.94■□□□□ 0.62
SNX6-202ENST00000396526 AFF2P51816 1311 aa18.94■□□□□ 0.62
SNX6-202ENST00000396526 TCRBV5S4A2TA0A5A2 114 aa18.94■□□□□ 0.62
SNX6-202ENST00000396526 GOLGA8BA8MQT2 603 aa18.94■□□□□ 0.62
SNX6-202ENST00000396526 SRP68Q9UHB9 627 aaKnown RBP18.94■□□□□ 0.62
SNX6-202ENST00000396526 MINPP1Q9UNW1 487 aa18.94■□□□□ 0.62
SNX6-202ENST00000396526 LRP5O75197 1615 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms