RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 VGLL2Q8N8G2 317 aa17.26■□□□□ 0.35
RTFDC1-203ENST00000395881 XAGE2Q96GT9 111 aa17.26■□□□□ 0.35
RTFDC1-203ENST00000395881 UPF3BQ9BZI7 483 aaKnown RBP17.26■□□□□ 0.35
RTFDC1-203ENST00000395881 ALDH8A1Q9H2A2 487 aaPredicted RBP17.26■□□□□ 0.35
RTFDC1-203ENST00000395881 RPAP1Q9BWH6 1393 aaPredicted RBP17.26■□□□□ 0.35
RTFDC1-203ENST00000395881 ZFYP08048 801 aaPredicted RBP17.25■□□□□ 0.35
RTFDC1-203ENST00000395881 DEKP35659 375 aaKnown RBP17.25■□□□□ 0.35
RTFDC1-203ENST00000395881 GSE1Q14687 1217 aa17.25■□□□□ 0.35
RTFDC1-203ENST00000395881 ATP2B3Q16720 1220 aa17.25■□□□□ 0.35
RTFDC1-203ENST00000395881 EDC3Q96F86 508 aaKnown RBP17.25■□□□□ 0.35
RTFDC1-203ENST00000395881 CNNM1Q9NRU3 951 aa17.25■□□□□ 0.35
RTFDC1-203ENST00000395881 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
RTFDC1-203ENST00000395881 U3KPZ7 1027 aaPredicted RBP17.25■□□□□ 0.35
RTFDC1-203ENST00000395881 DICER1Q9UPY3 1922 aaKnown RBP17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 PDE8BO95263 885 aa17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 KCNJ4P48050 445 aa17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 KRT32Q14532 448 aa17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 GORABQ5T7V8 394 aa17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 SOGA3Q5TF21 947 aa17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 DDX46Q7L014 1031 aaKnown RBP17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 LIMCH1Q9UPQ0 1083 aa17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 CYP46A1Q9Y6A2 500 aa17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 SNED1Q8TER0 1413 aa17.24■□□□□ 0.35
RTFDC1-203ENST00000395881 GOLIM4O00461 696 aa17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 SLC27A2O14975 620 aa17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 SF3B3Q15393 1217 aaKnown RBP17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 CCDC152Q4G0S7 254 aa17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 CCDC93Q567U6 631 aa17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 TTC39AQ5SRH9 613 aa17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 ZMYM1Q5SVZ6 1142 aa17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 ZNF589Q86UQ0 364 aaPredicted RBP17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 LTBP3Q9NS15 1303 aa17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 LMNB1P20700 586 aa17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 RUFY3Q7L099 469 aa17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 ZSCAN31Q96LW9 406 aaPredicted RBP17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 JAKMIP1Q96N16 626 aaKnown RBP17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 CCDC85AQ96PX6 553 aaPredicted RBP17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
RTFDC1-203ENST00000395881 COL4A1P02462 1669 aa17.22■□□□□ 0.35
RTFDC1-203ENST00000395881 PPEF1O14829 653 aaPredicted RBP17.22■□□□□ 0.35
RTFDC1-203ENST00000395881 RNF113AO15541 343 aaKnown RBP17.22■□□□□ 0.35
RTFDC1-203ENST00000395881 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
RTFDC1-203ENST00000395881 SH2B1Q9NRF2 756 aaPredicted RBP17.22■□□□□ 0.35
RTFDC1-203ENST00000395881 MYH7P12883 1935 aa17.22■□□□□ 0.35
RTFDC1-203ENST00000395881 AKAP11Q9UKA4 1901 aa17.22■□□□□ 0.35
RTFDC1-203ENST00000395881 GOLGA6L22H0YM25 854 aa17.21■□□□□ 0.35
RTFDC1-203ENST00000395881 AK2P54819 239 aa17.21■□□□□ 0.35
RTFDC1-203ENST00000395881 ANKRD1Q15327 319 aa17.21■□□□□ 0.35
RTFDC1-203ENST00000395881 PUM3Q15397 648 aaKnown RBP17.21■□□□□ 0.35
RTFDC1-203ENST00000395881 SKOR2Q2VWA4 1001 aaPredicted RBP17.21■□□□□ 0.35
RTFDC1-203ENST00000395881 ZGPATQ8N5A5 531 aaKnown RBP17.21■□□□□ 0.35
RTFDC1-203ENST00000395881 LPIN2Q92539 896 aa17.21■□□□□ 0.35
RTFDC1-203ENST00000395881 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.35
RTFDC1-203ENST00000395881 BBOX1O75936 387 aa17.2■□□□□ 0.34
RTFDC1-203ENST00000395881 UQCRFS1P1P0C7P4 283 aa17.2■□□□□ 0.34
RTFDC1-203ENST00000395881 FGFR2P21802 821 aa17.2■□□□□ 0.34
RTFDC1-203ENST00000395881 ADORA1P30542 326 aa17.2■□□□□ 0.34
RTFDC1-203ENST00000395881 GRAPQ13588 217 aa17.2■□□□□ 0.34
RTFDC1-203ENST00000395881 RTKN2Q8IZC4 609 aa17.2■□□□□ 0.34
RTFDC1-203ENST00000395881 GRAPLQ8TC17 118 aaPredicted RBP17.2■□□□□ 0.34
RTFDC1-203ENST00000395881 ZNF526Q8TF50 670 aaPredicted RBP17.2■□□□□ 0.34
RTFDC1-203ENST00000395881 TIAM2Q8IVF5 1701 aa17.2■□□□□ 0.34
RTFDC1-203ENST00000395881 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 TTF1Q15361 905 aaPredicted RBP17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 ADCK5Q3MIX3 580 aa17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 CC2D2BQ6DHV5 1058 aa17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 ATP6V0A2Q9Y487 856 aa17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 NDUFB9Q9Y6M9 179 aa17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 PDIA4P13667 645 aaKnown RBP17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 ARID4AP29374 1257 aaPredicted RBP17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 ZSCAN25Q6NSZ9 544 aa17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 BLOC1S2Q6QNY1 142 aa17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 CELF1Q92879 486 aaKnown RBP17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 MPHOSPH8Q99549 860 aa17.19■□□□□ 0.34
RTFDC1-203ENST00000395881 TRAK2O60296 914 aa17.18■□□□□ 0.34
RTFDC1-203ENST00000395881 BAG4O95429 457 aaKnown RBP17.18■□□□□ 0.34
RTFDC1-203ENST00000395881 IGHMBP2P38935 993 aaKnown RBP17.18■□□□□ 0.34
RTFDC1-203ENST00000395881 SP8Q8IXZ3 490 aa17.18■□□□□ 0.34
RTFDC1-203ENST00000395881 CDC5LQ99459 802 aaKnown RBP17.18■□□□□ 0.34
RTFDC1-203ENST00000395881 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.18■□□□□ 0.34
RTFDC1-203ENST00000395881 SEC31BQ9NQW1 1179 aa17.18■□□□□ 0.34
RTFDC1-203ENST00000395881 ZNF277Q9NRM2 450 aaPredicted RBP17.18■□□□□ 0.34
RTFDC1-203ENST00000395881 BRD1O95696 1058 aa17.17■□□□□ 0.34
RTFDC1-203ENST00000395881 HMGB1P09429 215 aaKnown RBP17.17■□□□□ 0.34
RTFDC1-203ENST00000395881 SLC5A1P13866 664 aa17.17■□□□□ 0.34
RTFDC1-203ENST00000395881 RPS6KB1P23443 525 aa17.17■□□□□ 0.34
RTFDC1-203ENST00000395881 PSMD1Q99460 953 aa17.17■□□□□ 0.34
RTFDC1-203ENST00000395881 APPBP2Q92624 585 aa17.16■□□□□ 0.34
RTFDC1-203ENST00000395881 GPBP1L1Q9HC44 474 aaPredicted RBP17.16■□□□□ 0.34
RTFDC1-203ENST00000395881 ZDHHC9Q9Y397 364 aa17.16■□□□□ 0.34
RTFDC1-203ENST00000395881 MAST3O60307 1309 aa17.16■□□□□ 0.34
RTFDC1-203ENST00000395881 LRRC37AA6NMS7 1700 aa17.16■□□□□ 0.34
RTFDC1-203ENST00000395881 SEC62Q99442 399 aaKnown RBP17.15■□□□□ 0.34
RTFDC1-203ENST00000395881 ZC3H4Q9UPT8 1303 aaKnown RBP17.15■□□□□ 0.34
RTFDC1-203ENST00000395881 MCAMP43121 646 aa17.15■□□□□ 0.34
RTFDC1-203ENST00000395881 ZAP70P43403 619 aa17.15■□□□□ 0.34
RTFDC1-203ENST00000395881 RPS8P62241 208 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms