RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 ATF4P18848 351 aaPredicted RBP8.6□□□□□ -1.03
CDKN3-203ENST00000395577 ZNF157P51786 506 aaPredicted RBP8.6□□□□□ -1.03
CDKN3-203ENST00000395577 GAS6Q14393 721 aa8.6□□□□□ -1.03
CDKN3-203ENST00000395577 TTBK2Q6IQ55 1244 aa8.6□□□□□ -1.03
CDKN3-203ENST00000395577 RASGRP4Q8TDF6 673 aa8.6□□□□□ -1.03
CDKN3-203ENST00000395577 ZNF296Q8WUU4 475 aaPredicted RBP8.6□□□□□ -1.03
CDKN3-203ENST00000395577 RHOVQ96L33 236 aa8.6□□□□□ -1.03
CDKN3-203ENST00000395577 DNAJC2Q99543 621 aaKnown RBP8.6□□□□□ -1.03
CDKN3-203ENST00000395577 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.6□□□□□ -1.03
CDKN3-203ENST00000395577 SMG9Q9H0W8 520 aaKnown RBP8.6□□□□□ -1.03
CDKN3-203ENST00000395577 CLEC4MQ9H2X3 399 aaPredicted RBP8.6□□□□□ -1.03
CDKN3-203ENST00000395577 TMEM39AQ9NV64 488 aa8.6□□□□□ -1.03
CDKN3-203ENST00000395577 NSFL1CQ9UNZ2 370 aaKnown RBP8.6□□□□□ -1.03
CDKN3-203ENST00000395577 ADARB2-AS1A8MUL3 147 aa8.59□□□□□ -1.03
CDKN3-203ENST00000395577 LCE2BO14633 110 aa8.59□□□□□ -1.03
CDKN3-203ENST00000395577 PF4P02776 101 aa8.59□□□□□ -1.03
CDKN3-203ENST00000395577 PTPRAP18433 802 aa8.59□□□□□ -1.03
CDKN3-203ENST00000395577 MAP2K3P46734 347 aa8.59□□□□□ -1.03
CDKN3-203ENST00000395577 FAM160A1Q05DH4 1040 aa8.59□□□□□ -1.03
CDKN3-203ENST00000395577 MCF2L2Q86YR7 1114 aa8.59□□□□□ -1.03
CDKN3-203ENST00000395577 ARMC5Q96C12 935 aa8.59□□□□□ -1.03
CDKN3-203ENST00000395577 NAGPAQ9UK23 515 aa8.59□□□□□ -1.03
CDKN3-203ENST00000395577 NEURL1BA8MQ27 555 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 PAGE1O75459 146 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 LMNB2Q03252 620 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 PPP2R3AQ06190 1150 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 PCDH1Q08174 1060 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 CAMK2GQ13555 558 aaPredicted RBP8.58□□□□□ -1.04
CDKN3-203ENST00000395577 FBXL19Q6PCT2 694 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 EAF1Q96JC9 268 aaPredicted RBP8.58□□□□□ -1.04
CDKN3-203ENST00000395577 LPIN3Q9BQK8 851 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 LACRTQ9GZZ8 138 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 MBIPQ9NS73 344 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 NXF1Q9UBU9 619 aaKnown RBP8.58□□□□□ -1.04
CDKN3-203ENST00000395577 SOX13Q9UN79 622 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 TRIM33Q9UPN9 1127 aa8.58□□□□□ -1.04
CDKN3-203ENST00000395577 FAM177BA6PVY3 158 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 FGRP09769 529 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 TFE3P19532 575 aaPredicted RBP8.57□□□□□ -1.04
CDKN3-203ENST00000395577 SNAP47Q5SQN1 464 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 PCNX4Q63HM2 1172 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 ADAMTSL4Q6UY14 1074 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 AGMOQ6ZNB7 445 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 VN1R5Q7Z5H4 357 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 GPR161Q8N6U8 529 aaKnown RBP8.57□□□□□ -1.04
CDKN3-203ENST00000395577 SPATA32Q96LK8 384 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 ADAM19Q9H013 955 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 KCNQ5Q9NR82 932 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 FRRS1LQ9P0K9 344 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 SAMM50Q9Y512 469 aa8.57□□□□□ -1.04
CDKN3-203ENST00000395577 SUPT16HQ9Y5B9 1047 aaKnown RBP8.57□□□□□ -1.04
CDKN3-203ENST00000395577 LMNB1P20700 586 aa8.56□□□□□ -1.04
CDKN3-203ENST00000395577 GARTP22102 1010 aa8.56□□□□□ -1.04
CDKN3-203ENST00000395577 RPS26P62854 115 aaKnown RBP8.56□□□□□ -1.04
CDKN3-203ENST00000395577 PSAPL1Q6NUJ1 521 aa8.56□□□□□ -1.04
CDKN3-203ENST00000395577 GOLM1Q8NBJ4 401 aa8.56□□□□□ -1.04
CDKN3-203ENST00000395577 SEC16BQ96JE7 1060 aa8.56□□□□□ -1.04
CDKN3-203ENST00000395577 MDFIQ99750 246 aa8.56□□□□□ -1.04
CDKN3-203ENST00000395577 NT5C1AQ9BXI3 368 aa8.56□□□□□ -1.04
CDKN3-203ENST00000395577 ELOA3CA0A087WX78 387 aaPredicted RBP8.55□□□□□ -1.04
CDKN3-203ENST00000395577 ELOA3DA6NLF2 546 aaPredicted RBP8.55□□□□□ -1.04
CDKN3-203ENST00000395577 GREM1O60565 184 aa8.55□□□□□ -1.04
CDKN3-203ENST00000395577 STK10O94804 968 aaKnown RBP8.55□□□□□ -1.04
CDKN3-203ENST00000395577 B3GALT4O96024 378 aa8.55□□□□□ -1.04
CDKN3-203ENST00000395577 NASPP49321 788 aaPredicted RBP8.55□□□□□ -1.04
CDKN3-203ENST00000395577 ZNF423Q2M1K9 1284 aa8.55□□□□□ -1.04
CDKN3-203ENST00000395577 ELOA3BQ3SY89 546 aa8.55□□□□□ -1.04
CDKN3-203ENST00000395577 DPH6Q7L8W6 267 aa8.55□□□□□ -1.04
CDKN3-203ENST00000395577 ELOA3Q8NG57 546 aa8.55□□□□□ -1.04
CDKN3-203ENST00000395577 SH2B1Q9NRF2 756 aaPredicted RBP8.55□□□□□ -1.04
CDKN3-203ENST00000395577 GGA1Q9UJY5 639 aa8.55□□□□□ -1.04
CDKN3-203ENST00000395577 RGS9O75916 674 aaPredicted RBP8.54□□□□□ -1.04
CDKN3-203ENST00000395577 NME2P22392 152 aa8.54□□□□□ -1.04
CDKN3-203ENST00000395577 ALAS2P22557 587 aa8.54□□□□□ -1.04
CDKN3-203ENST00000395577 CDC27P30260 824 aa8.54□□□□□ -1.04
CDKN3-203ENST00000395577 GDF6Q6KF10 455 aaPredicted RBP8.54□□□□□ -1.04
CDKN3-203ENST00000395577 NUDT8Q8WV74 236 aa8.54□□□□□ -1.04
CDKN3-203ENST00000395577 TTC9Q92623 222 aa8.54□□□□□ -1.04
CDKN3-203ENST00000395577 UBP1Q9NZI7 540 aa8.54□□□□□ -1.04
CDKN3-203ENST00000395577 EFR3BQ9Y2G0 817 aa8.54□□□□□ -1.04
CDKN3-203ENST00000395577 IGF1RP08069 1367 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 H3BM21 787 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 SSBP05455 408 aaKnown RBP eCLIP8.53□□□□□ -1.04
CDKN3-203ENST00000395577 ESRRAP11474 423 aaPredicted RBP8.53□□□□□ -1.04
CDKN3-203ENST00000395577 BMP6P22004 513 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 CABP4P57796 275 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 RBL2Q08999 1139 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 IKBKEQ14164 716 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 SULF2Q8IWU5 870 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 NPAS3Q8IXF0 933 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 GOLGA6L1Q8N7Z2 621 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 HIRIP3Q9BW71 556 aaPredicted RBP8.53□□□□□ -1.04
CDKN3-203ENST00000395577 LNPKQ9C0E8 428 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 GINM1Q9NU53 330 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 CYP8B1Q9UNU6 501 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 PCDHB5Q9Y5E4 795 aa8.53□□□□□ -1.04
CDKN3-203ENST00000395577 APOBRQ0VD83 1088 aa8.52□□□□□ -1.05
CDKN3-203ENST00000395577 LRRC14Q15048 493 aa8.52□□□□□ -1.05
CDKN3-203ENST00000395577 RASIP1Q5U651 963 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms