RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CFHR5Q9BXR6 569 aa22.17■■□□□ 1.14
SNRPA1-202ENST00000394082 MAP3K11Q16584 847 aa22.16■■□□□ 1.14
SNRPA1-202ENST00000394082 C9orf78Q9NZ63 289 aaPredicted RBP22.16■■□□□ 1.14
SNRPA1-202ENST00000394082 SNAP23O00161 211 aa22.15■■□□□ 1.14
SNRPA1-202ENST00000394082 SREBF2Q12772 1141 aa22.15■■□□□ 1.14
SNRPA1-202ENST00000394082 PKN2Q16513 984 aaKnown RBP22.15■■□□□ 1.14
SNRPA1-202ENST00000394082 EPHA10Q5JZY3 1008 aa22.15■■□□□ 1.14
SNRPA1-202ENST00000394082 HELBQ8NG08 1087 aaPredicted RBP22.15■■□□□ 1.14
SNRPA1-202ENST00000394082 DEFB129Q9H1M3 183 aa22.15■■□□□ 1.14
SNRPA1-202ENST00000394082 CHMP3Q9Y3E7 222 aa22.15■■□□□ 1.14
SNRPA1-202ENST00000394082 MYO1BO43795 1136 aa22.14■■□□□ 1.13
SNRPA1-202ENST00000394082 PTPN12Q05209 780 aaKnown RBP22.14■■□□□ 1.13
SNRPA1-202ENST00000394082 SRCIN1Q9C0H9 1055 aa22.14■■□□□ 1.13
SNRPA1-202ENST00000394082 ECM29Q5VYK3 1845 aa22.14■■□□□ 1.13
SNRPA1-202ENST00000394082 UTYO14607 1347 aa22.13■■□□□ 1.13
SNRPA1-202ENST00000394082 FAM205AQ6ZU69 1335 aa22.13■■□□□ 1.13
SNRPA1-202ENST00000394082 UBE4AQ14139 1066 aa22.13■■□□□ 1.13
SNRPA1-202ENST00000394082 TAF7LQ5H9L4 462 aa22.13■■□□□ 1.13
SNRPA1-202ENST00000394082 CNNM1Q9NRU3 951 aa22.13■■□□□ 1.13
SNRPA1-202ENST00000394082 TNRC18O15417 2968 aaPredicted RBP22.12■■□□□ 1.13
SNRPA1-202ENST00000394082 ZNF521Q96K83 1311 aa22.12■■□□□ 1.13
SNRPA1-202ENST00000394082 SPDYE2BA6NHP3 402 aa22.12■■□□□ 1.13
SNRPA1-202ENST00000394082 SPDYE6P0CI01 402 aa22.12■■□□□ 1.13
SNRPA1-202ENST00000394082 INHBEP58166 350 aa22.12■■□□□ 1.13
SNRPA1-202ENST00000394082 SPRYD7Q5W111 196 aa22.11■■□□□ 1.13
SNRPA1-202ENST00000394082 ZNF594Q96JF6 807 aaPredicted RBP22.11■■□□□ 1.13
SNRPA1-202ENST00000394082 PPP1R12BO60237 982 aaPredicted RBP22.1■■□□□ 1.13
SNRPA1-202ENST00000394082 ALDH1A1P00352 501 aa22.1■■□□□ 1.13
SNRPA1-202ENST00000394082 SUPT20HL1Q3ZLR7 823 aa22.1■■□□□ 1.13
SNRPA1-202ENST00000394082 CFAP100Q494V2 611 aa22.1■■□□□ 1.13
SNRPA1-202ENST00000394082 TDRD7Q8NHU6 1098 aaKnown RBP22.1■■□□□ 1.13
SNRPA1-202ENST00000394082 ZNF296Q8WUU4 475 aaPredicted RBP22.1■■□□□ 1.13
SNRPA1-202ENST00000394082 KAZALD1Q96I82 304 aa22.1■■□□□ 1.13
SNRPA1-202ENST00000394082 PRMT6Q96LA8 375 aaPredicted RBP22.1■■□□□ 1.13
SNRPA1-202ENST00000394082 ANGEL1Q9UNK9 670 aaKnown RBP22.1■■□□□ 1.13
SNRPA1-202ENST00000394082 TBC1D8O95759 1140 aa22.09■■□□□ 1.13
SNRPA1-202ENST00000394082 ZBTB48P10074 688 aaPredicted RBP22.09■■□□□ 1.13
SNRPA1-202ENST00000394082 SLC4A10Q6U841 1118 aa22.09■■□□□ 1.13
SNRPA1-202ENST00000394082 FAM9BQ8IZU0 186 aa22.09■■□□□ 1.13
SNRPA1-202ENST00000394082 MROH5Q6ZUA9 1318 aa22.08■■□□□ 1.13
SNRPA1-202ENST00000394082 LAMB1P07942 1786 aa22.08■■□□□ 1.13
SNRPA1-202ENST00000394082 GPR25O00155 361 aa22.08■■□□□ 1.13
SNRPA1-202ENST00000394082 RABL6Q3YEC7 729 aaPredicted RBP22.08■■□□□ 1.13
SNRPA1-202ENST00000394082 SERPINA10Q9UK55 444 aa22.08■■□□□ 1.13
SNRPA1-202ENST00000394082 RIPOR2Q9Y4F9 1068 aa22.08■■□□□ 1.13
SNRPA1-202ENST00000394082 SSC5DA1L4H1 1573 aa22.08■■□□□ 1.12
SNRPA1-202ENST00000394082 MANSC4A6NHS7 340 aaPredicted RBP22.07■■□□□ 1.12
SNRPA1-202ENST00000394082 HIBADHP31937 336 aaKnown RBP22.07■■□□□ 1.12
SNRPA1-202ENST00000394082 SLC10A4Q96EP9 437 aa22.07■■□□□ 1.12
SNRPA1-202ENST00000394082 SUCLG2Q96I99 432 aa22.07■■□□□ 1.12
SNRPA1-202ENST00000394082 PTPRCP08575 1304 aa22.06■■□□□ 1.12
SNRPA1-202ENST00000394082 F8W031 263 aaPredicted RBP22.06■■□□□ 1.12
SNRPA1-202ENST00000394082 PLIN1O60240 522 aa22.06■■□□□ 1.12
SNRPA1-202ENST00000394082 NBPF7P0C2Y1 421 aaPredicted RBP22.06■■□□□ 1.12
SNRPA1-202ENST00000394082 TNFAIP1Q13829 316 aa22.06■■□□□ 1.12
SNRPA1-202ENST00000394082 PRKG1Q13976 671 aa22.06■■□□□ 1.12
SNRPA1-202ENST00000394082 FAM84BQ96KN1 310 aaPredicted RBP22.06■■□□□ 1.12
SNRPA1-202ENST00000394082 MFSD14BQ5SR56 506 aa22.05■■□□□ 1.12
SNRPA1-202ENST00000394082 HPS5Q9UPZ3 1129 aa22.05■■□□□ 1.12
SNRPA1-202ENST00000394082 PCDHAC2Q9Y5I4 1007 aa22.05■■□□□ 1.12
SNRPA1-202ENST00000394082 MKRN3Q13064 507 aaKnown RBP22.04■■□□□ 1.12
SNRPA1-202ENST00000394082 SPDYE2Q495Y8 402 aa22.04■■□□□ 1.12
SNRPA1-202ENST00000394082 MRPL50Q8N5N7 158 aaKnown RBP22.04■■□□□ 1.12
SNRPA1-202ENST00000394082 ARAP2Q8WZ64 1704 aa22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 CLRN2A0PK11 232 aa22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 FKTNO75072 461 aa22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 GYG1P46976 350 aa22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 IREB2P48200 963 aaKnown RBP22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 RBM5P52756 815 aaKnown RBP eCLIP22.03■■□□□ 1.126e-6■□□□□ 9
SNRPA1-202ENST00000394082 RASA3Q14644 834 aa22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 FBXO33Q7Z6M2 555 aa22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 WNK4Q96J92 1243 aa22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 PUS3Q9BZE2 481 aaKnown RBP22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 BICC1Q9H694 974 aaKnown RBP22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 VEZTQ9HBM0 779 aa22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 TTF2Q9UNY4 1162 aaKnown RBP22.03■■□□□ 1.12
SNRPA1-202ENST00000394082 E9PSI1 815 aa22.02■■□□□ 1.12
SNRPA1-202ENST00000394082 HDLBPQ00341 1268 aaKnown RBP22.02■■□□□ 1.12
SNRPA1-202ENST00000394082 NBPF12Q5TAG4 269 aaPredicted RBP22.02■■□□□ 1.12
SNRPA1-202ENST00000394082 FBXO46Q6PJ61 603 aaPredicted RBP22.02■■□□□ 1.12
SNRPA1-202ENST00000394082 IFNL1Q8IU54 200 aa22.02■■□□□ 1.12
SNRPA1-202ENST00000394082 ANKRD13AQ8IZ07 590 aa22.02■■□□□ 1.12
SNRPA1-202ENST00000394082 KIF16BQ96L93 1317 aa22.02■■□□□ 1.12
SNRPA1-202ENST00000394082 USP2O75604 605 aaPredicted RBP22.01■■□□□ 1.11
SNRPA1-202ENST00000394082 SLC34A2O95436 690 aa22.01■■□□□ 1.11
SNRPA1-202ENST00000394082 TBC1D22AQ8WUA7 517 aa22.01■■□□□ 1.11
SNRPA1-202ENST00000394082 ZNF70Q9UC06 446 aaPredicted RBP22.01■■□□□ 1.11
SNRPA1-202ENST00000394082 FZD1Q9UP38 647 aa22.01■■□□□ 1.11
SNRPA1-202ENST00000394082 JAG2Q9Y219 1238 aa22.01■■□□□ 1.11
SNRPA1-202ENST00000394082 AOX1Q06278 1338 aa22.01■■□□□ 1.11
SNRPA1-202ENST00000394082 PDE8BO95263 885 aa22■■□□□ 1.11
SNRPA1-202ENST00000394082 CAVIN4Q5BKX8 364 aa22■■□□□ 1.11
SNRPA1-202ENST00000394082 DZIP1LQ8IYY4 767 aaKnown RBP22■■□□□ 1.11
SNRPA1-202ENST00000394082 ANKRD44Q8N8A2 993 aa22■■□□□ 1.11
SNRPA1-202ENST00000394082 VGLL2Q8N8G2 317 aa22■■□□□ 1.11
SNRPA1-202ENST00000394082 CLMNQ96JQ2 1002 aa22■■□□□ 1.11
SNRPA1-202ENST00000394082 MRIQ9BWK5 157 aa22■■□□□ 1.11
SNRPA1-202ENST00000394082 TESPA1A2RU30 521 aaPredicted RBP21.99■■□□□ 1.11
SNRPA1-202ENST00000394082 SOX10P56693 466 aa21.99■■□□□ 1.11
SNRPA1-202ENST00000394082 VPS37DQ86XT2 251 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms