RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 TTC39AQ5SRH9 613 aa18.28■□□□□ 0.52
SUMO1-203ENST00000392246 DENND2AQ9ULE3 1009 aa18.28■□□□□ 0.52
SUMO1-203ENST00000392246 ARID4AP29374 1257 aaPredicted RBP18.28■□□□□ 0.52
SUMO1-203ENST00000392246 DACT2Q5SW24 774 aa18.28■□□□□ 0.52
SUMO1-203ENST00000392246 B4GALNT3Q6L9W6 998 aa18.28■□□□□ 0.52
SUMO1-203ENST00000392246 CHAF1AQ13111 956 aaPredicted RBP18.27■□□□□ 0.51
SUMO1-203ENST00000392246 RSBN1LQ6PCB5 846 aaPredicted RBP18.27■□□□□ 0.51
SUMO1-203ENST00000392246 ZNF512BQ96KM6 892 aaPredicted RBP18.27■□□□□ 0.51
SUMO1-203ENST00000392246 MYO3BQ8WXR4 1341 aa18.26■□□□□ 0.51
SUMO1-203ENST00000392246 RPS12P25398 132 aaKnown RBP18.26■□□□□ 0.51
SUMO1-203ENST00000392246 FKBP1AP62942 108 aaKnown RBP18.26■□□□□ 0.51
SUMO1-203ENST00000392246 NUCB1Q02818 461 aa18.26■□□□□ 0.51
SUMO1-203ENST00000392246 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
SUMO1-203ENST00000392246 CCDC136Q96JN2 1154 aa18.26■□□□□ 0.51
SUMO1-203ENST00000392246 JAG2Q9Y219 1238 aa18.26■□□□□ 0.51
SUMO1-203ENST00000392246 ZNF646O15015 1829 aaPredicted RBP18.26■□□□□ 0.51
SUMO1-203ENST00000392246 RASGRF1Q13972 1273 aa18.25■□□□□ 0.51
SUMO1-203ENST00000392246 CHD1LQ86WJ1 897 aa18.25■□□□□ 0.51
SUMO1-203ENST00000392246 WDR66Q8TBY9 1149 aa18.25■□□□□ 0.51
SUMO1-203ENST00000392246 TBC1D22AQ8WUA7 517 aa18.25■□□□□ 0.51
SUMO1-203ENST00000392246 L3MBTL3Q96JM7 780 aaPredicted RBP18.25■□□□□ 0.51
SUMO1-203ENST00000392246 ZBTB12Q9Y330 459 aaPredicted RBP18.25■□□□□ 0.51
SUMO1-203ENST00000392246 PDS5AQ29RF7 1337 aaKnown RBP18.25■□□□□ 0.51
SUMO1-203ENST00000392246 GMPSP49915 693 aaPredicted RBP18.24■□□□□ 0.51
SUMO1-203ENST00000392246 MFSD14BQ5SR56 506 aa18.24■□□□□ 0.51
SUMO1-203ENST00000392246 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
SUMO1-203ENST00000392246 SPATA5Q8NB90 893 aa18.24■□□□□ 0.51
SUMO1-203ENST00000392246 DPF2Q92785 391 aa18.24■□□□□ 0.51
SUMO1-203ENST00000392246 GPATCH3Q96I76 525 aa18.24■□□□□ 0.51
SUMO1-203ENST00000392246 MXD3Q9BW11 206 aa18.24■□□□□ 0.51
SUMO1-203ENST00000392246 LNPKQ9C0E8 428 aa18.24■□□□□ 0.51
SUMO1-203ENST00000392246 PPP4R2Q9NY27 417 aa18.24■□□□□ 0.51
SUMO1-203ENST00000392246 WDR90Q96KV7 1748 aa18.24■□□□□ 0.51
SUMO1-203ENST00000392246 AKAP11Q9UKA4 1901 aa18.24■□□□□ 0.51
SUMO1-203ENST00000392246 MCAMP43121 646 aa18.23■□□□□ 0.51
SUMO1-203ENST00000392246 CENPQQ7L2Z9 268 aaPredicted RBP18.23■□□□□ 0.51
SUMO1-203ENST00000392246 ZNF526Q8TF50 670 aaPredicted RBP18.23■□□□□ 0.51
SUMO1-203ENST00000392246 GMLQ99445 158 aa18.23■□□□□ 0.51
SUMO1-203ENST00000392246 HMG20BQ9P0W2 317 aa18.23■□□□□ 0.51
SUMO1-203ENST00000392246 SCN4AP35499 1836 aa18.23■□□□□ 0.51
SUMO1-203ENST00000392246 COL1A1P02452 1464 aaPredicted RBP18.23■□□□□ 0.51
SUMO1-203ENST00000392246 LMOD1P29536 600 aaPredicted RBP18.23■□□□□ 0.51
SUMO1-203ENST00000392246 SCNN1DP51172 638 aa18.23■□□□□ 0.51
SUMO1-203ENST00000392246 SCARF1Q14162 830 aa18.23■□□□□ 0.51
SUMO1-203ENST00000392246 CERS5Q8N5B7 392 aa18.23■□□□□ 0.51
SUMO1-203ENST00000392246 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.23■□□□□ 0.51
SUMO1-203ENST00000392246 ECHDC1Q9NTX5 307 aa18.23■□□□□ 0.51
SUMO1-203ENST00000392246 IQCA1LA6NCM1 817 aa18.22■□□□□ 0.51
SUMO1-203ENST00000392246 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
SUMO1-203ENST00000392246 RRAGCQ9HB90 399 aa18.22■□□□□ 0.51
SUMO1-203ENST00000392246 GPRC5DQ9NZD1 345 aa18.22■□□□□ 0.51
SUMO1-203ENST00000392246 CNOT7Q9UIV1 285 aaKnown RBP18.22■□□□□ 0.51
SUMO1-203ENST00000392246 SALL1Q9NSC2 1324 aa18.21■□□□□ 0.51
SUMO1-203ENST00000392246 ATP5JP18859 108 aa18.21■□□□□ 0.51
SUMO1-203ENST00000392246 MMP14P50281 582 aa18.21■□□□□ 0.51
SUMO1-203ENST00000392246 PI16Q6UXB8 463 aa18.21■□□□□ 0.51
SUMO1-203ENST00000392246 GPBP1L1Q9HC44 474 aaPredicted RBP18.21■□□□□ 0.51
SUMO1-203ENST00000392246 HACL1Q9UJ83 578 aa18.21■□□□□ 0.51
SUMO1-203ENST00000392246 SUGT1Q9Y2Z0 365 aa18.21■□□□□ 0.51
SUMO1-203ENST00000392246 TTC41PQ6P2S7 1318 aa18.21■□□□□ 0.51
SUMO1-203ENST00000392246 POTECB2RU33 542 aa18.2■□□□□ 0.5
SUMO1-203ENST00000392246 H7C1D1 291 aa18.2■□□□□ 0.5
SUMO1-203ENST00000392246 USP17L8P0C7I0 530 aa18.2■□□□□ 0.5
SUMO1-203ENST00000392246 VEGFAP15692 232 aaPredicted RBP18.2■□□□□ 0.5
SUMO1-203ENST00000392246 MX1P20591 662 aa18.2■□□□□ 0.5
SUMO1-203ENST00000392246 KIAA0825Q8IV33 1275 aa18.2■□□□□ 0.5
SUMO1-203ENST00000392246 OGFOD1Q8N543 542 aa18.2■□□□□ 0.5
SUMO1-203ENST00000392246 OTUD7AQ8TE49 926 aaPredicted RBP18.2■□□□□ 0.5
SUMO1-203ENST00000392246 SNRKQ9NRH2 765 aa18.2■□□□□ 0.5
SUMO1-203ENST00000392246 EPS15P42566 896 aa18.19■□□□□ 0.5
SUMO1-203ENST00000392246 ZAP70P43403 619 aa18.19■□□□□ 0.5
SUMO1-203ENST00000392246 MICALL2Q8IY33 904 aa18.19■□□□□ 0.5
SUMO1-203ENST00000392246 BOLA2Q9H3K6 86 aa18.19■□□□□ 0.5
SUMO1-203ENST00000392246 NMRK2Q9NPI5 230 aa18.19■□□□□ 0.5
SUMO1-203ENST00000392246 ABCF2Q9UG63 623 aa18.19■□□□□ 0.5
SUMO1-203ENST00000392246 HDAC9Q9UKV0 1011 aa18.19■□□□□ 0.5
SUMO1-203ENST00000392246 SALL3Q9BXA9 1300 aa18.19■□□□□ 0.5
SUMO1-203ENST00000392246 F8W031 263 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-203ENST00000392246 ERC2O15083 957 aa18.18■□□□□ 0.5
SUMO1-203ENST00000392246 SPTY2D1Q68D10 685 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-203ENST00000392246 ZNF784Q8NCA9 323 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-203ENST00000392246 CYP2E1P05181 493 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-203ENST00000392246 LDHBP07195 334 aaKnown RBP18.18■□□□□ 0.5
SUMO1-203ENST00000392246 EPHX2P34913 555 aa18.18■□□□□ 0.5
SUMO1-203ENST00000392246 ZNF280AP59817 542 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-203ENST00000392246 ADARB2Q9NS39 739 aaKnown RBP18.18■□□□□ 0.5
SUMO1-203ENST00000392246 STAP2Q9UGK3 403 aa18.18■□□□□ 0.5
SUMO1-203ENST00000392246 TTF2Q9UNY4 1162 aaKnown RBP18.18■□□□□ 0.5
SUMO1-203ENST00000392246 SHTN1A0MZ66 631 aa18.17■□□□□ 0.5
SUMO1-203ENST00000392246 GLRX3O76003 335 aaKnown RBP18.17■□□□□ 0.5
SUMO1-203ENST00000392246 PDE1AP54750 535 aa18.17■□□□□ 0.5
SUMO1-203ENST00000392246 GRIK5Q16478 980 aa18.17■□□□□ 0.5
SUMO1-203ENST00000392246 TSHZ3Q63HK5 1081 aa18.17■□□□□ 0.5
SUMO1-203ENST00000392246 TBC1D9Q6ZT07 1266 aa18.17■□□□□ 0.5
SUMO1-203ENST00000392246 ERICH6Q7L0X2 663 aa18.17■□□□□ 0.5
SUMO1-203ENST00000392246 HAUS7Q99871 368 aa18.17■□□□□ 0.5
SUMO1-203ENST00000392246 TAF1DQ9H5J8 278 aaPredicted RBP18.17■□□□□ 0.5
SUMO1-203ENST00000392246 MAST3O60307 1309 aa18.17■□□□□ 0.5
SUMO1-203ENST00000392246 PRDX5P30044 214 aa18.16■□□□□ 0.5
SUMO1-203ENST00000392246 TTF1Q15361 905 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms