RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 ZNF512BQ96KM6 892 aaPredicted RBP8.28□□□□□ -1.08
TRAV35-201ENST00000390462 RAB6BQ9NRW1 208 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 PFDN2Q9UHV9 154 aa8.28□□□□□ -1.08
TRAV35-201ENST00000390462 PPEF1O14829 653 aaPredicted RBP8.27□□□□□ -1.09
TRAV35-201ENST00000390462 RASGRP1O95267 797 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 FGAP02671 866 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 CRKP46108 304 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 CDAN1Q8IWY9 1227 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 NIM1KQ8IY84 436 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 GOLM1Q8NBJ4 401 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 ANKRD24Q8TF21 1146 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 CRBNQ96SW2 442 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 CABP1Q9NZU7 370 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 BCS1LQ9Y276 419 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 FNDC3AQ9Y2H6 1198 aaKnown RBP8.27□□□□□ -1.09
TRAV35-201ENST00000390462 RPS6KL1Q9Y6S9 549 aa8.27□□□□□ -1.09
TRAV35-201ENST00000390462 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
TRAV35-201ENST00000390462 FOSP01100 380 aaPredicted RBP8.26□□□□□ -1.09
TRAV35-201ENST00000390462 IL2RAP01589 272 aa8.26□□□□□ -1.09
TRAV35-201ENST00000390462 LARP1BQ659C4 914 aaKnown RBP8.26□□□□□ -1.09
TRAV35-201ENST00000390462 PDE12Q6L8Q7 609 aaKnown RBP8.26□□□□□ -1.09
TRAV35-201ENST00000390462 SPATC1Q76KD6 591 aa8.26□□□□□ -1.09
TRAV35-201ENST00000390462 SV2BQ7L1I2 683 aa8.26□□□□□ -1.09
TRAV35-201ENST00000390462 CHPFQ8IZ52 775 aa8.26□□□□□ -1.09
TRAV35-201ENST00000390462 ZNF784Q8NCA9 323 aaPredicted RBP8.26□□□□□ -1.09
TRAV35-201ENST00000390462 OR6P1Q8NGX9 317 aa8.26□□□□□ -1.09
TRAV35-201ENST00000390462 PPM1EQ8WY54 764 aa8.26□□□□□ -1.09
TRAV35-201ENST00000390462 ZMYM5Q9UJ78 669 aa8.26□□□□□ -1.09
TRAV35-201ENST00000390462 FBXO9Q9UK97 447 aaPredicted RBP8.26□□□□□ -1.09
TRAV35-201ENST00000390462 TLR6Q9Y2C9 796 aa8.26□□□□□ -1.09
TRAV35-201ENST00000390462 A0A087X0B3 334 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 KIF4AO95239 1232 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 GJB6O95452 261 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 PTMSP20962 102 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 BDNFP23560 247 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 CDC27P30260 824 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 PDE6BP35913 854 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 RAB27AP51159 221 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 LMNB2Q03252 620 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 POU5F1BQ06416 359 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 DHX9Q08211 1270 aaKnown RBP8.25□□□□□ -1.09
TRAV35-201ENST00000390462 SSRP1Q08945 709 aaKnown RBP8.25□□□□□ -1.09
TRAV35-201ENST00000390462 TRIM32Q13049 653 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 CAMK2GQ13555 558 aaPredicted RBP8.25□□□□□ -1.09
TRAV35-201ENST00000390462 SEZ6Q53EL9 994 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 WDR78Q5VTH9 848 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 TTC39BQ5VTQ0 682 aaPredicted RBP8.25□□□□□ -1.09
TRAV35-201ENST00000390462 FAM9BQ8IZU0 186 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 GLIS3Q8NEA6 775 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 ZSWIM2Q8NEG5 633 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 TTC8Q8TAM2 541 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 ARHGEF10LQ9HCE6 1279 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 ENAMQ9NRM1 1142 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 SWAP70Q9UH65 585 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 PPM1HQ9ULR3 514 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 PARP3Q9Y6F1 533 aa8.25□□□□□ -1.09
TRAV35-201ENST00000390462 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 NRDCO43847 1150 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 LILRA1O75019 489 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 ITGBL1O95965 494 aaPredicted RBP8.24□□□□□ -1.09
TRAV35-201ENST00000390462 CD53P19397 219 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 LIG3P49916 1009 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 GUCY2FP51841 1108 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 KCNC4Q03721 635 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 CTC1Q2NKJ3 1217 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 PERM1Q5SV97 790 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 FBXW10Q5XX13 1052 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 ZNF295-AS1Q8N0V1 137 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 UBR7Q8N806 425 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 ANKLE1Q8NAG6 615 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 ATL2Q8NHH9 583 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 FERD3LQ96RJ6 166 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 TNKS2Q9H2K2 1166 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 ELP3Q9H9T3 547 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 TRAK1Q9UPV9 953 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 HMGXB3Q12766 1538 aa8.24□□□□□ -1.09
TRAV35-201ENST00000390462 ROBO2Q9HCK4 1378 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 IRS4O14654 1257 aaPredicted RBP8.23□□□□□ -1.09
TRAV35-201ENST00000390462 PDE8AO60658 829 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 VARSP26640 1264 aaKnown RBP8.23□□□□□ -1.09
TRAV35-201ENST00000390462 TMEM67Q5HYA8 995 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 AKAP4Q5JQC9 854 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 PLA2G2CQ5R387 149 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 WWC2Q6AWC2 1192 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 KSR2Q6VAB6 950 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 FAM196AQ6ZSG2 479 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 AMOTL1Q8IY63 956 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 ST13P5Q8NFI4 369 aaPredicted RBP8.23□□□□□ -1.09
TRAV35-201ENST00000390462 SVIPQ8NHG7 77 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 CNKSR1Q969H4 720 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 ZIM2Q9NZV7 527 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 HRH3Q9Y5N1 445 aa8.23□□□□□ -1.09
TRAV35-201ENST00000390462 AKAP10O43572 662 aa8.22□□□□□ -1.09
TRAV35-201ENST00000390462 NEK2P51955 445 aa8.22□□□□□ -1.09
TRAV35-201ENST00000390462 FCGRTP55899 365 aa8.22□□□□□ -1.09
TRAV35-201ENST00000390462 SKOR1P84550 965 aa8.22□□□□□ -1.09
TRAV35-201ENST00000390462 LMOD3Q0VAK6 560 aa8.22□□□□□ -1.09
TRAV35-201ENST00000390462 C10orf62Q5T681 223 aaPredicted RBP8.22□□□□□ -1.09
TRAV35-201ENST00000390462 KIAA0319Q5VV43 1072 aa8.22□□□□□ -1.09
TRAV35-201ENST00000390462 POTEGQ6S5H5 508 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms