RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 USP44Q9H0E7 712 aa17.08■□□□□ 0.32
TRBV4-1-201ENST00000390357 BICC1Q9H694 974 aaKnown RBP17.08■□□□□ 0.32
TRBV4-1-201ENST00000390357 SAGE1Q9NXZ1 904 aa17.08■□□□□ 0.32
TRBV4-1-201ENST00000390357 FAM205AQ6ZU69 1335 aa17.07■□□□□ 0.32
TRBV4-1-201ENST00000390357 SLC10A3P09131 477 aa17.07■□□□□ 0.32
TRBV4-1-201ENST00000390357 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
TRBV4-1-201ENST00000390357 SMC4Q9NTJ3 1288 aa17.07■□□□□ 0.32
TRBV4-1-201ENST00000390357 PPP2R3BQ9Y5P8 575 aa17.07■□□□□ 0.32
TRBV4-1-201ENST00000390357 PAPPA2Q9BXP8 1791 aa17.07■□□□□ 0.32
TRBV4-1-201ENST00000390357 AKAP11Q9UKA4 1901 aa17.06■□□□□ 0.32
TRBV4-1-201ENST00000390357 SNAP23O00161 211 aa17.06■□□□□ 0.32
TRBV4-1-201ENST00000390357 KIF23Q02241 960 aaPredicted RBP17.06■□□□□ 0.32
TRBV4-1-201ENST00000390357 CAVIN4Q5BKX8 364 aa17.06■□□□□ 0.32
TRBV4-1-201ENST00000390357 ARMC9Q7Z3E5 817 aa17.06■□□□□ 0.32
TRBV4-1-201ENST00000390357 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
TRBV4-1-201ENST00000390357 FBXO3Q9UK99 471 aa17.06■□□□□ 0.32
TRBV4-1-201ENST00000390357 COL1A1P02452 1464 aaPredicted RBP17.05■□□□□ 0.32
TRBV4-1-201ENST00000390357 UNCXA6NJT0 531 aa17.05■□□□□ 0.32
TRBV4-1-201ENST00000390357 PDE8BO95263 885 aa17.05■□□□□ 0.32
TRBV4-1-201ENST00000390357 VPS37DQ86XT2 251 aa17.05■□□□□ 0.32
TRBV4-1-201ENST00000390357 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
TRBV4-1-201ENST00000390357 FAM84BQ96KN1 310 aaPredicted RBP17.05■□□□□ 0.32
TRBV4-1-201ENST00000390357 CAPN15O75808 1086 aa17.04■□□□□ 0.32
TRBV4-1-201ENST00000390357 CERS5Q8N5B7 392 aa17.04■□□□□ 0.32
TRBV4-1-201ENST00000390357 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
TRBV4-1-201ENST00000390357 PUS3Q9BZE2 481 aaKnown RBP17.04■□□□□ 0.32
TRBV4-1-201ENST00000390357 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
TRBV4-1-201ENST00000390357 KIF16BQ96L93 1317 aa17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 TTLL12Q14166 644 aaPredicted RBP17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 SUPT20HL1Q3ZLR7 823 aa17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 CFAP100Q494V2 611 aa17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 METTL24Q5JXM2 366 aa17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 FBXO33Q7Z6M2 555 aa17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 CSRNP1Q96S65 589 aa17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 MRIQ9BWK5 157 aa17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 DEFB129Q9H1M3 183 aa17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 SERPINA10Q9UK55 444 aa17.03■□□□□ 0.32
TRBV4-1-201ENST00000390357 PPP1R12BO60237 982 aaPredicted RBP17.02■□□□□ 0.32
TRBV4-1-201ENST00000390357 GYG1P46976 350 aa17.02■□□□□ 0.32
TRBV4-1-201ENST00000390357 TNFAIP1Q13829 316 aa17.02■□□□□ 0.32
TRBV4-1-201ENST00000390357 MFSD14BQ5SR56 506 aa17.02■□□□□ 0.32
TRBV4-1-201ENST00000390357 RASAL3Q86YV0 1011 aa17.02■□□□□ 0.32
TRBV4-1-201ENST00000390357 ZIC5Q96T25 663 aa17.02■□□□□ 0.32
TRBV4-1-201ENST00000390357 NOB1Q9ULX3 412 aaKnown RBP17.02■□□□□ 0.32
TRBV4-1-201ENST00000390357 SPDYE2BA6NHP3 402 aa17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 UBE2Q2LH0YL09 131 aa17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 FRAT2O75474 233 aaPredicted RBP17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 IFIT1P09914 478 aaKnown RBP17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 UBTFL1P0CB47 393 aaPredicted RBP17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 SPDYE6P0CI01 402 aa17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 RBM5P52756 815 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 HDLBPQ00341 1268 aaKnown RBP17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 LRRC24Q50LG9 513 aa17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 RNF186Q9NXI6 227 aa17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 SUGT1Q9Y2Z0 365 aa17.01■□□□□ 0.31
TRBV4-1-201ENST00000390357 F8W031 263 aaPredicted RBP17■□□□□ 0.31
TRBV4-1-201ENST00000390357 EYA2O00167 538 aa17■□□□□ 0.31
TRBV4-1-201ENST00000390357 IPO8O15397 1037 aaKnown RBP17■□□□□ 0.31
TRBV4-1-201ENST00000390357 TM4SF4P48230 202 aa17■□□□□ 0.31
TRBV4-1-201ENST00000390357 INHBEP58166 350 aa17■□□□□ 0.31
TRBV4-1-201ENST00000390357 MAP3K11Q16584 847 aa17■□□□□ 0.31
TRBV4-1-201ENST00000390357 PRAMEF18Q5VWM3 479 aa17■□□□□ 0.31
TRBV4-1-201ENST00000390357 VGLL2Q8N8G2 317 aa17■□□□□ 0.31
TRBV4-1-201ENST00000390357 ABHD8Q96I13 439 aa17■□□□□ 0.31
TRBV4-1-201ENST00000390357 TTF2Q9UNY4 1162 aaKnown RBP17■□□□□ 0.31
TRBV4-1-201ENST00000390357 CASP8AP2Q9UKL3 1982 aa16.99■□□□□ 0.31
TRBV4-1-201ENST00000390357 TRPA1O75762 1119 aa16.99■□□□□ 0.31
TRBV4-1-201ENST00000390357 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
TRBV4-1-201ENST00000390357 PUM3Q15397 648 aaKnown RBP16.99■□□□□ 0.31
TRBV4-1-201ENST00000390357 LDLRAD1Q5T700 205 aa16.99■□□□□ 0.31
TRBV4-1-201ENST00000390357 LPIN2Q92539 896 aa16.99■□□□□ 0.31
TRBV4-1-201ENST00000390357 TSKSQ9UJT2 592 aa16.99■□□□□ 0.31
TRBV4-1-201ENST00000390357 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
TRBV4-1-201ENST00000390357 CIAO1O76071 339 aa16.98■□□□□ 0.31
TRBV4-1-201ENST00000390357 FGFR2P21802 821 aa16.98■□□□□ 0.31
TRBV4-1-201ENST00000390357 RFX5P48382 616 aaPredicted RBP16.98■□□□□ 0.31
TRBV4-1-201ENST00000390357 PTPN12Q05209 780 aaKnown RBP16.98■□□□□ 0.31
TRBV4-1-201ENST00000390357 SREBF2Q12772 1141 aa16.98■□□□□ 0.31
TRBV4-1-201ENST00000390357 SLC5A1P13866 664 aa16.97■□□□□ 0.31
TRBV4-1-201ENST00000390357 TNNI2P48788 182 aa16.97■□□□□ 0.31
TRBV4-1-201ENST00000390357 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
TRBV4-1-201ENST00000390357 MOB2Q70IA6 237 aa16.97■□□□□ 0.31
TRBV4-1-201ENST00000390357 SLC10A4Q96EP9 437 aa16.97■□□□□ 0.31
TRBV4-1-201ENST00000390357 ANGEL1Q9UNK9 670 aaKnown RBP16.97■□□□□ 0.31
TRBV4-1-201ENST00000390357 MAST3O60307 1309 aa16.96■□□□□ 0.31
TRBV4-1-201ENST00000390357 ZBTB22O15209 634 aa16.96■□□□□ 0.31
TRBV4-1-201ENST00000390357 GNAI3P08754 354 aa16.96■□□□□ 0.31
TRBV4-1-201ENST00000390357 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
TRBV4-1-201ENST00000390357 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
TRBV4-1-201ENST00000390357 DZIP1LQ8IYY4 767 aaKnown RBP16.96■□□□□ 0.31
TRBV4-1-201ENST00000390357 VEZTQ9HBM0 779 aa16.96■□□□□ 0.31
TRBV4-1-201ENST00000390357 CEP126Q9P2H0 1117 aa16.96■□□□□ 0.31
TRBV4-1-201ENST00000390357 ALDH1A1P00352 501 aa16.95■□□□□ 0.3
TRBV4-1-201ENST00000390357 ZBTB48P10074 688 aaPredicted RBP16.95■□□□□ 0.3
TRBV4-1-201ENST00000390357 IL15P40933 162 aaPredicted RBP16.95■□□□□ 0.3
TRBV4-1-201ENST00000390357 CRKP46108 304 aa16.95■□□□□ 0.3
TRBV4-1-201ENST00000390357 IREB2P48200 963 aaKnown RBP16.95■□□□□ 0.3
TRBV4-1-201ENST00000390357 RASA3Q14644 834 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms