RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 STYK1Q6J9G0 422 aa23.58■■□□□ 1.37
CCM2-202ENST00000381112 GGA1Q9UJY5 639 aa23.58■■□□□ 1.37
CCM2-202ENST00000381112 H0YIN7 160 aa23.58■■□□□ 1.36
CCM2-202ENST00000381112 RASEFQ8IZ41 740 aa23.58■■□□□ 1.36
CCM2-202ENST00000381112 WWC3Q9ULE0 1092 aa23.58■■□□□ 1.36
CCM2-202ENST00000381112 SNX14Q9Y5W7 946 aa23.58■■□□□ 1.36
CCM2-202ENST00000381112 TCRBV5S4A2TA0A5A2 114 aa23.57■■□□□ 1.36
CCM2-202ENST00000381112 UFL1O94874 794 aa23.57■■□□□ 1.36
CCM2-202ENST00000381112 MAP3K12Q12852 859 aa23.57■■□□□ 1.36
CCM2-202ENST00000381112 PRPF40BQ6NWY9 871 aaKnown RBP23.57■■□□□ 1.36
CCM2-202ENST00000381112 LRRC37AA6NMS7 1700 aa23.56■■□□□ 1.36
CCM2-202ENST00000381112 CD2BP2O95400 341 aaKnown RBP23.56■■□□□ 1.36
CCM2-202ENST00000381112 HSCBQ8IWL3 235 aa23.56■■□□□ 1.36
CCM2-202ENST00000381112 PUS7LQ9H0K6 701 aaKnown RBP23.56■■□□□ 1.36
CCM2-202ENST00000381112 ZNF532Q9HCE3 1301 aa23.56■■□□□ 1.36
CCM2-202ENST00000381112 CREB3L3Q68CJ9 461 aa23.56■■□□□ 1.36
CCM2-202ENST00000381112 TBC1D16Q8TBP0 767 aa23.56■■□□□ 1.36
CCM2-202ENST00000381112 UPF1Q92900 1129 aaKnown RBP eCLIP23.56■■□□□ 1.36
CCM2-202ENST00000381112 ZNF622Q969S3 477 aaKnown RBP eCLIP23.56■■□□□ 1.36
CCM2-202ENST00000381112 POLLQ9UGP5 575 aa23.56■■□□□ 1.36
CCM2-202ENST00000381112 GPR101Q96P66 508 aaPredicted RBP23.55■■□□□ 1.36
CCM2-202ENST00000381112 DSCC1Q9BVC3 393 aa23.55■■□□□ 1.36
CCM2-202ENST00000381112 C10orf71Q711Q0 1435 aa23.55■■□□□ 1.36
CCM2-202ENST00000381112 VPS53Q5VIR6 699 aa23.54■■□□□ 1.36
CCM2-202ENST00000381112 U3KPZ7 1027 aaPredicted RBP23.54■■□□□ 1.36
CCM2-202ENST00000381112 SLC27A2O14975 620 aa23.53■■□□□ 1.36
CCM2-202ENST00000381112 FRAT2O75474 233 aaPredicted RBP23.53■■□□□ 1.36
CCM2-202ENST00000381112 CHRNA5P30532 468 aa23.53■■□□□ 1.36
CCM2-202ENST00000381112 LRP2BPQ9P2M1 347 aa23.53■■□□□ 1.36
CCM2-202ENST00000381112 LTBP1Q14766 1721 aa23.53■■□□□ 1.36
CCM2-202ENST00000381112 HSPD1P10809 573 aaKnown RBP23.53■■□□□ 1.36
CCM2-202ENST00000381112 ZNF804AQ7Z570 1209 aa23.53■■□□□ 1.36
CCM2-202ENST00000381112 MAGEB6Q8N7X4 407 aa23.53■■□□□ 1.36
CCM2-202ENST00000381112 TDRD7Q8NHU6 1098 aaKnown RBP23.52■■□□□ 1.36
CCM2-202ENST00000381112 DOCK2Q92608 1830 aa23.52■■□□□ 1.36
CCM2-202ENST00000381112 GPAA1O43292 621 aa23.51■■□□□ 1.35
CCM2-202ENST00000381112 ST18O60284 1047 aa23.51■■□□□ 1.35
CCM2-202ENST00000381112 ZKSCAN1P17029 563 aaPredicted RBP23.51■■□□□ 1.35
CCM2-202ENST00000381112 RNF20Q5VTR2 975 aa23.51■■□□□ 1.35
CCM2-202ENST00000381112 OLFM4Q6UX06 510 aa23.51■■□□□ 1.35
CCM2-202ENST00000381112 ABCF2Q9UG63 623 aa23.51■■□□□ 1.35
CCM2-202ENST00000381112 NEK4P51957 841 aa23.51■■□□□ 1.35
CCM2-202ENST00000381112 CNKSR1Q969H4 720 aa23.51■■□□□ 1.35
CCM2-202ENST00000381112 C6orf229H3BNL8 230 aa23.5■■□□□ 1.35
CCM2-202ENST00000381112 FOXP2O15409 715 aa23.5■■□□□ 1.35
CCM2-202ENST00000381112 TSGA10IPQ3SY00 556 aa23.5■■□□□ 1.35
CCM2-202ENST00000381112 MPNDQ8N594 471 aa23.5■■□□□ 1.35
CCM2-202ENST00000381112 IL27Q8NEV9 243 aa23.5■■□□□ 1.35
CCM2-202ENST00000381112 ZBTB7AO95365 584 aa23.49■■□□□ 1.35
CCM2-202ENST00000381112 UPF3BQ9BZI7 483 aaKnown RBP23.49■■□□□ 1.35
CCM2-202ENST00000381112 TM6SF1Q9BZW5 370 aa23.49■■□□□ 1.35
CCM2-202ENST00000381112 TMX4Q9H1E5 349 aaPredicted RBP23.49■■□□□ 1.35
CCM2-202ENST00000381112 MYH7P12883 1935 aa23.49■■□□□ 1.35
CCM2-202ENST00000381112 K7ELQ4 463 aaPredicted RBP23.49■■□□□ 1.35
CCM2-202ENST00000381112 CHAF1AQ13111 956 aaPredicted RBP23.49■■□□□ 1.35
CCM2-202ENST00000381112 CD209Q9NNX6 404 aa23.49■■□□□ 1.35
CCM2-202ENST00000381112 RAI14Q9P0K7 980 aa23.49■■□□□ 1.35
CCM2-202ENST00000381112 IL1R1P14778 569 aa23.48■■□□□ 1.35
CCM2-202ENST00000381112 ADCK5Q3MIX3 580 aa23.48■■□□□ 1.35
CCM2-202ENST00000381112 DPP8Q6V1X1 898 aaPredicted RBP23.48■■□□□ 1.35
CCM2-202ENST00000381112 TAF6LQ9Y6J9 622 aa23.48■■□□□ 1.35
CCM2-202ENST00000381112 DUOX1Q9NRD9 1551 aa23.48■■□□□ 1.35
CCM2-202ENST00000381112 MYO5AQ9Y4I1 1855 aaKnown RBP23.48■■□□□ 1.35
CCM2-202ENST00000381112 MTFR1LQ9H019 292 aa23.47■■□□□ 1.35
CCM2-202ENST00000381112 SALL1Q9NSC2 1324 aa23.47■■□□□ 1.35
CCM2-202ENST00000381112 R3HDM1Q15032 1099 aaKnown RBP23.47■■□□□ 1.35
CCM2-202ENST00000381112 WDR66Q8TBY9 1149 aa23.47■■□□□ 1.35
CCM2-202ENST00000381112 C7orf43Q8WVR3 580 aa23.47■■□□□ 1.35
CCM2-202ENST00000381112 JAKMIP1Q96N16 626 aaKnown RBP23.47■■□□□ 1.35
CCM2-202ENST00000381112 STRBPQ96SI9 672 aaKnown RBP23.47■■□□□ 1.35
CCM2-202ENST00000381112 RPAP1Q9BWH6 1393 aaPredicted RBP23.46■■□□□ 1.35
CCM2-202ENST00000381112 CYP21A2P08686 494 aa23.46■■□□□ 1.35
CCM2-202ENST00000381112 ZNF384Q8TF68 577 aa23.46■■□□□ 1.35
CCM2-202ENST00000381112 AIDAQ96BJ3 306 aa23.46■■□□□ 1.35
CCM2-202ENST00000381112 ZSWIM6Q9HCJ5 1215 aa23.46■■□□□ 1.35
CCM2-202ENST00000381112 CYP7A1P22680 504 aa23.45■■□□□ 1.35
CCM2-202ENST00000381112 ERICH6Q7L0X2 663 aa23.45■■□□□ 1.35
CCM2-202ENST00000381112 CASTP20810 708 aaKnown RBP23.45■■□□□ 1.34
CCM2-202ENST00000381112 JAG2Q9Y219 1238 aa23.45■■□□□ 1.34
CCM2-202ENST00000381112 ATF5Q9Y2D1 282 aaPredicted RBP23.45■■□□□ 1.34
CCM2-202ENST00000381112 IGSF3O75054 1194 aa23.44■■□□□ 1.34
CCM2-202ENST00000381112 MBD4O95243 580 aa23.44■■□□□ 1.34
CCM2-202ENST00000381112 MCM2P49736 904 aa23.44■■□□□ 1.34
CCM2-202ENST00000381112 KRT32Q14532 448 aa23.44■■□□□ 1.34
CCM2-202ENST00000381112 ADGRA1Q86SQ6 560 aa23.44■■□□□ 1.34
CCM2-202ENST00000381112 ZGPATQ8N5A5 531 aaKnown RBP23.44■■□□□ 1.34
CCM2-202ENST00000381112 NSUN4Q96CB9 384 aaKnown RBP23.44■■□□□ 1.34
CCM2-202ENST00000381112 TTC14Q96N46 770 aa23.44■■□□□ 1.34
CCM2-202ENST00000381112 CTNNA3Q9UI47 895 aa23.44■■□□□ 1.34
CCM2-202ENST00000381112 FGAP02671 866 aa23.43■■□□□ 1.34
CCM2-202ENST00000381112 PSMA5P28066 241 aa23.43■■□□□ 1.34
CCM2-202ENST00000381112 PRDX5P30044 214 aa23.43■■□□□ 1.34
CCM2-202ENST00000381112 MECOMQ03112 1051 aa23.43■■□□□ 1.34
CCM2-202ENST00000381112 SPTY2D1Q68D10 685 aaPredicted RBP23.43■■□□□ 1.34
CCM2-202ENST00000381112 TMED8Q6PL24 325 aaPredicted RBP23.43■■□□□ 1.34
CCM2-202ENST00000381112 ZC3H12CQ9C0D7 883 aaKnown RBP23.43■■□□□ 1.34
CCM2-202ENST00000381112 COA1Q9GZY4 146 aa23.43■■□□□ 1.34
CCM2-202ENST00000381112 NAA16Q6N069 864 aaPredicted RBP23.43■■□□□ 1.34
CCM2-202ENST00000381112 ARMT1Q9H993 441 aa23.43■■□□□ 1.34
CCM2-202ENST00000381112 SLX4Q8IY92 1834 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms