RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 TRPA1O75762 1119 aa21.74■■□□□ 1.07
HMGN1-204ENST00000380749 FKBP1AP62942 108 aaKnown RBP21.74■■□□□ 1.07
HMGN1-204ENST00000380749 DGKZQ13574 1117 aa21.74■■□□□ 1.07
HMGN1-204ENST00000380749 MOB2Q70IA6 237 aa21.74■■□□□ 1.07
HMGN1-204ENST00000380749 CERS5Q8N5B7 392 aa21.74■■□□□ 1.07
HMGN1-204ENST00000380749 SUCLG2Q96I99 432 aa21.74■■□□□ 1.07
HMGN1-204ENST00000380749 ZBED3Q96IU2 234 aaPredicted RBP21.74■■□□□ 1.07
HMGN1-204ENST00000380749 CSRNP1Q96S65 589 aa21.74■■□□□ 1.07
HMGN1-204ENST00000380749 MCOLN1Q9GZU1 580 aa21.74■■□□□ 1.07
HMGN1-204ENST00000380749 CCDC85CA6NKD9 419 aa21.74■■□□□ 1.07
HMGN1-204ENST00000380749 UBE2Q2LH0YL09 131 aa21.74■■□□□ 1.07
HMGN1-204ENST00000380749 UTYO14607 1347 aa21.73■■□□□ 1.07
HMGN1-204ENST00000380749 MYO1BO43795 1136 aa21.73■■□□□ 1.07
HMGN1-204ENST00000380749 ARMC9Q7Z3E5 817 aa21.73■■□□□ 1.07
HMGN1-204ENST00000380749 MRPL50Q8N5N7 158 aaKnown RBP21.73■■□□□ 1.07
HMGN1-204ENST00000380749 MTMR14Q8NCE2 650 aa21.73■■□□□ 1.07
HMGN1-204ENST00000380749 OTOFQ9HC10 1997 aa21.72■■□□□ 1.07
HMGN1-204ENST00000380749 F8W031 263 aaPredicted RBP21.72■■□□□ 1.07
HMGN1-204ENST00000380749 NBPF7P0C2Y1 421 aaPredicted RBP21.72■■□□□ 1.07
HMGN1-204ENST00000380749 UBE4AQ14139 1066 aa21.72■■□□□ 1.07
HMGN1-204ENST00000380749 MROH5Q6ZUA9 1318 aa21.71■■□□□ 1.07
HMGN1-204ENST00000380749 KAZALD1Q96I82 304 aa21.71■■□□□ 1.07
HMGN1-204ENST00000380749 BICC1Q9H694 974 aaKnown RBP21.71■■□□□ 1.07
HMGN1-204ENST00000380749 JAG2Q9Y219 1238 aa21.71■■□□□ 1.07
HMGN1-204ENST00000380749 PPP2R3BQ9Y5P8 575 aa21.71■■□□□ 1.07
HMGN1-204ENST00000380749 CFAP100Q494V2 611 aa21.7■■□□□ 1.06
HMGN1-204ENST00000380749 FAM205AQ6ZU69 1335 aa21.69■■□□□ 1.06
HMGN1-204ENST00000380749 SPDYE2BA6NHP3 402 aa21.69■■□□□ 1.06
HMGN1-204ENST00000380749 SPDYE6P0CI01 402 aa21.69■■□□□ 1.06
HMGN1-204ENST00000380749 RABL6Q3YEC7 729 aaPredicted RBP21.69■■□□□ 1.06
HMGN1-204ENST00000380749 DEFB129Q9H1M3 183 aa21.69■■□□□ 1.06
HMGN1-204ENST00000380749 HIBADHP31937 336 aaKnown RBP21.68■■□□□ 1.06
HMGN1-204ENST00000380749 PRKG1Q13976 671 aa21.68■■□□□ 1.06
HMGN1-204ENST00000380749 SSH1Q8WYL5 1049 aa21.68■■□□□ 1.06
HMGN1-204ENST00000380749 PUS3Q9BZE2 481 aaKnown RBP21.68■■□□□ 1.06
HMGN1-204ENST00000380749 SSC5DA1L4H1 1573 aa21.67■■□□□ 1.06
HMGN1-204ENST00000380749 GYG1P46976 350 aa21.67■■□□□ 1.06
HMGN1-204ENST00000380749 RBM5P52756 815 aaKnown RBP eCLIP21.67■■□□□ 1.06
HMGN1-204ENST00000380749 SREBF2Q12772 1141 aa21.67■■□□□ 1.06
HMGN1-204ENST00000380749 MFSD14BQ5SR56 506 aa21.67■■□□□ 1.06
HMGN1-204ENST00000380749 VEZTQ9HBM0 779 aa21.67■■□□□ 1.06
HMGN1-204ENST00000380749 ANGEL1Q9UNK9 670 aaKnown RBP21.67■■□□□ 1.06
HMGN1-204ENST00000380749 CLRN2A0PK11 232 aa21.66■■□□□ 1.06
HMGN1-204ENST00000380749 SLFN5Q08AF3 891 aa21.66■■□□□ 1.06
HMGN1-204ENST00000380749 VPS37DQ86XT2 251 aa21.66■■□□□ 1.06
HMGN1-204ENST00000380749 TDRD7Q8NHU6 1098 aaKnown RBP21.66■■□□□ 1.06
HMGN1-204ENST00000380749 RIPOR2Q9Y4F9 1068 aa21.66■■□□□ 1.06
HMGN1-204ENST00000380749 PCDHAC2Q9Y5I4 1007 aa21.66■■□□□ 1.06
HMGN1-204ENST00000380749 PPP1R12BO60237 982 aaPredicted RBP21.65■■□□□ 1.06
HMGN1-204ENST00000380749 PTPN12Q05209 780 aaKnown RBP21.65■■□□□ 1.06
HMGN1-204ENST00000380749 MKRN3Q13064 507 aaKnown RBP21.65■■□□□ 1.06
HMGN1-204ENST00000380749 ALDH1L2Q3SY69 923 aa21.65■■□□□ 1.06
HMGN1-204ENST00000380749 METTL24Q5JXM2 366 aa21.65■■□□□ 1.06
HMGN1-204ENST00000380749 ANKRD44Q8N8A2 993 aa21.65■■□□□ 1.06
HMGN1-204ENST00000380749 FAM84BQ96KN1 310 aaPredicted RBP21.65■■□□□ 1.06
HMGN1-204ENST00000380749 SMC4Q9NTJ3 1288 aa21.65■■□□□ 1.06
HMGN1-204ENST00000380749 SUPT20HL1Q3ZLR7 823 aa21.64■■□□□ 1.06
HMGN1-204ENST00000380749 LDLRAD1Q5T700 205 aa21.64■■□□□ 1.06
HMGN1-204ENST00000380749 PRMT6Q96LA8 375 aaPredicted RBP21.64■■□□□ 1.06
HMGN1-204ENST00000380749 TTF2Q9UNY4 1162 aaKnown RBP21.64■■□□□ 1.06
HMGN1-204ENST00000380749 TNFAIP1Q13829 316 aa21.63■■□□□ 1.05
HMGN1-204ENST00000380749 CTU1Q7Z7A3 348 aaKnown RBP21.63■■□□□ 1.05
HMGN1-204ENST00000380749 SERPINA10Q9UK55 444 aa21.63■■□□□ 1.05
HMGN1-204ENST00000380749 AK9Q5TCS8 1911 aa21.62■■□□□ 1.05
HMGN1-204ENST00000380749 TM4SF4P48230 202 aa21.62■■□□□ 1.05
HMGN1-204ENST00000380749 MAP3K11Q16584 847 aa21.62■■□□□ 1.05
HMGN1-204ENST00000380749 LRRC24Q50LG9 513 aa21.62■■□□□ 1.05
HMGN1-204ENST00000380749 CAVIN4Q5BKX8 364 aa21.62■■□□□ 1.05
HMGN1-204ENST00000380749 TNRC18O15417 2968 aaPredicted RBP21.62■■□□□ 1.05
HMGN1-204ENST00000380749 FRAT2O75474 233 aaPredicted RBP21.61■■□□□ 1.05
HMGN1-204ENST00000380749 MLLT1Q03111 559 aaPredicted RBP21.61■■□□□ 1.05
HMGN1-204ENST00000380749 SPRYD7Q5W111 196 aa21.61■■□□□ 1.05
HMGN1-204ENST00000380749 USP44Q9H0E7 712 aa21.61■■□□□ 1.05
HMGN1-204ENST00000380749 PDE8BO95263 885 aa21.61■■□□□ 1.05
HMGN1-204ENST00000380749 SPDYE2Q495Y8 402 aa21.61■■□□□ 1.05
HMGN1-204ENST00000380749 TBC1D22AQ8WUA7 517 aa21.61■■□□□ 1.05
HMGN1-204ENST00000380749 FZD1Q9UP38 647 aa21.61■■□□□ 1.05
HMGN1-204ENST00000380749 AOX1Q06278 1338 aa21.6■■□□□ 1.05
HMGN1-204ENST00000380749 UNCXA6NJT0 531 aa21.6■■□□□ 1.05
HMGN1-204ENST00000380749 TBC1D8O95759 1140 aa21.6■■□□□ 1.05
HMGN1-204ENST00000380749 CT47B1P0C2W7 299 aaPredicted RBP21.6■■□□□ 1.05
HMGN1-204ENST00000380749 ZBTB48P10074 688 aaPredicted RBP21.6■■□□□ 1.05
HMGN1-204ENST00000380749 IREB2P48200 963 aaKnown RBP21.6■■□□□ 1.05
HMGN1-204ENST00000380749 RGS19P49795 217 aa21.6■■□□□ 1.05
HMGN1-204ENST00000380749 RASA3Q14644 834 aa21.6■■□□□ 1.05
HMGN1-204ENST00000380749 FBXO33Q7Z6M2 555 aa21.6■■□□□ 1.05
HMGN1-204ENST00000380749 VGLL2Q8N8G2 317 aa21.6■■□□□ 1.05
HMGN1-204ENST00000380749 SLC10A4Q96EP9 437 aa21.6■■□□□ 1.05
HMGN1-204ENST00000380749 CDCA7LQ96GN5 454 aa21.6■■□□□ 1.05
HMGN1-204ENST00000380749 IQSEC3Q9UPP2 1182 aaPredicted RBP21.6■■□□□ 1.05
HMGN1-204ENST00000380749 KIF16BQ96L93 1317 aa21.59■■□□□ 1.05
HMGN1-204ENST00000380749 CHAF1AQ13111 956 aaPredicted RBP21.59■■□□□ 1.05
HMGN1-204ENST00000380749 PUM3Q15397 648 aaKnown RBP21.59■■□□□ 1.05
HMGN1-204ENST00000380749 NBPF12Q5TAG4 269 aaPredicted RBP21.59■■□□□ 1.05
HMGN1-204ENST00000380749 KLHDC4Q8TBB5 520 aa21.59■■□□□ 1.05
HMGN1-204ENST00000380749 ZNF70Q9UC06 446 aaPredicted RBP21.59■■□□□ 1.05
HMGN1-204ENST00000380749 MANSC4A6NHS7 340 aaPredicted RBP21.58■■□□□ 1.04
HMGN1-204ENST00000380749 ALDH1A1P00352 501 aa21.58■■□□□ 1.04
HMGN1-204ENST00000380749 IFIT1P09914 478 aaKnown RBP21.58■■□□□ 1.04
HMGN1-204ENST00000380749 CRKP46108 304 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms