RNA–Protein interactions for RNA: ENST00000380692.6

MSL3-205, Transcript of MSL complex subunit 3, human

TSL 3

Gene MSL3, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSL3-205	ENST00000380692	EAF2	Q96CJ1	260 aa	Predicted RBP	11.24	□□□□□ -0.61
MSL3-205	ENST00000380692	LRRCC1	Q9C099	1032 aa		11.24	□□□□□ -0.61
MSL3-205	ENST00000380692	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.24	□□□□□ -0.61
MSL3-205	ENST00000380692	RRAGC	Q9HB90	399 aa		11.24	□□□□□ -0.61
MSL3-205	ENST00000380692	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.24	□□□□□ -0.61
MSL3-205	ENST00000380692	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.24	□□□□□ -0.61
MSL3-205	ENST00000380692	SPEF2	Q9C093	1822 aa		11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	HAX1	O00165	279 aa		11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	IGHD	P01880	384 aa		11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	IFIT2	P09913	472 aa	Known RBP	11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	VEGFA	P15692	232 aa	Predicted RBP	11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	PHKA1	P46020	1223 aa		11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	CCDC158	Q5M9N0	1113 aa		11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	AACS	Q86V21	672 aa		11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	GCC1	Q96CN9	775 aa		11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	LTBP1	Q14766	1721 aa		11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	SBF1	O95248	1867 aa		11.23	□□□□□ -0.61
MSL3-205	ENST00000380692	UTRN	P46939	3433 aa		11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	SMARCA5	O60264	1052 aa	Predicted RBP	11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	LMOD1	P29536	600 aa	Predicted RBP	11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	GMPS	P49915	693 aa	Predicted RBP	11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	CHAF1A	Q13111	956 aa	Predicted RBP	11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	DACT2	Q5SW24	774 aa		11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	DBNDD2	Q9BQY9	259 aa		11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	NMRK2	Q9NPI5	230 aa		11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	JAG2	Q9Y219	1238 aa		11.22	□□□□□ -0.61
MSL3-205	ENST00000380692	IQCA1L	A6NCM1	817 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	POTEC	B2RU33	542 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692		H7C1D1	291 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	SEMA3E	O15041	775 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	UQCRFS1P1	P0C7P4	283 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	RPS12	P25398	132 aa	Known RBP	11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	TTC39A	Q5SRH9	613 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	ANKRD45	Q5TZF3	282 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	PIP4P2	Q8N4L2	257 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	AGBL3	Q8NEM8	1001 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	DPF2	Q92785	391 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	MXD3	Q9BW11	206 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	GPRC5D	Q9NZD1	345 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	CNOT7	Q9UIV1	285 aa	Known RBP	11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	HACL1	Q9UJ83	578 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	DBNL	Q9UJU6	430 aa	Known RBP	11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	DENND2A	Q9ULE3	1009 aa		11.21	□□□□□ -0.61
MSL3-205	ENST00000380692	FAM205A	Q6ZU69	1335 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	MYO3B	Q8WXR4	1341 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	CHD4	Q14839	1912 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	USP17L8	P0C7I0	530 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	EPS15	P42566	896 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	SCNN1D	P51172	638 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	FKBP1A	P62942	108 aa	Known RBP	11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	MFSD14B	Q5SR56	506 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	MICALL2	Q8IY33	904 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	OGFOD1	Q8N543	542 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	WDR66	Q8TBY9	1149 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	TBC1D22A	Q8WUA7	517 aa		11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	TLR7	Q9NYK1	1049 aa	Known RBP	11.2	□□□□□ -0.62
MSL3-205	ENST00000380692	ZNF609	O15014	1411 aa		11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	ARID4A	P29374	1257 aa	Predicted RBP	11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	EPHX2	P34913	555 aa		11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	RASGRF1	Q13972	1273 aa		11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	B4GALNT3	Q6L9W6	998 aa		11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	KIAA0825	Q8IV33	1275 aa		11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	SMC5	Q8IY18	1101 aa		11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	CERS5	Q8N5B7	392 aa		11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	SPATA5	Q8NB90	893 aa		11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	GML	Q99445	158 aa		11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	CCDC88A	Q3V6T2	1871 aa		11.19	□□□□□ -0.62
MSL3-205	ENST00000380692	SHTN1	A0MZ66	631 aa		11.18	□□□□□ -0.62
MSL3-205	ENST00000380692		F8W031	263 aa	Predicted RBP	11.18	□□□□□ -0.62
MSL3-205	ENST00000380692	RBM26	Q5T8P6	1007 aa	Known RBP	11.18	□□□□□ -0.62
MSL3-205	ENST00000380692	PNMA8A	Q86V59	439 aa	Predicted RBP	11.18	□□□□□ -0.62
MSL3-205	ENST00000380692	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.18	□□□□□ -0.62
MSL3-205	ENST00000380692	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.18	□□□□□ -0.62
MSL3-205	ENST00000380692	ADARB2	Q9NS39	739 aa	Known RBP	11.18	□□□□□ -0.62
MSL3-205	ENST00000380692	HMG20B	Q9P0W2	317 aa		11.18	□□□□□ -0.62
MSL3-205	ENST00000380692	HDAC9	Q9UKV0	1011 aa		11.18	□□□□□ -0.62
MSL3-205	ENST00000380692	MCAM	P43121	646 aa		11.17	□□□□□ -0.62
MSL3-205	ENST00000380692	MMP14	P50281	582 aa		11.17	□□□□□ -0.62
MSL3-205	ENST00000380692	SCARF1	Q14162	830 aa		11.17	□□□□□ -0.62
MSL3-205	ENST00000380692	EAPP	Q56P03	285 aa	Predicted RBP	11.17	□□□□□ -0.62
MSL3-205	ENST00000380692	SAMD7	Q7Z3H4	446 aa		11.17	□□□□□ -0.62
MSL3-205	ENST00000380692	ZGPAT	Q8N5A5	531 aa	Known RBP	11.17	□□□□□ -0.62
MSL3-205	ENST00000380692	SNRK	Q9NRH2	765 aa		11.17	□□□□□ -0.62
MSL3-205	ENST00000380692	ABCF2	Q9UG63	623 aa		11.17	□□□□□ -0.62
MSL3-205	ENST00000380692	DICER1	Q9UPY3	1922 aa	Known RBP	11.17	□□□□□ -0.62
MSL3-205	ENST00000380692	KIF3C	O14782	793 aa		11.16	□□□□□ -0.62
MSL3-205	ENST00000380692	LDHB	P07195	334 aa	Known RBP	11.16	□□□□□ -0.62
MSL3-205	ENST00000380692	ZNF280A	P59817	542 aa	Predicted RBP	11.16	□□□□□ -0.62
MSL3-205	ENST00000380692	GRIK5	Q16478	980 aa		11.16	□□□□□ -0.62
MSL3-205	ENST00000380692	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.16	□□□□□ -0.62
MSL3-205	ENST00000380692	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.16	□□□□□ -0.62
MSL3-205	ENST00000380692	PI16	Q6UXB8	463 aa		11.16	□□□□□ -0.62
MSL3-205	ENST00000380692	USP50	Q70EL3	339 aa	Predicted RBP	11.16	□□□□□ -0.62
MSL3-205	ENST00000380692	CHD1L	Q86WJ1	897 aa		11.16	□□□□□ -0.62
MSL3-205	ENST00000380692	GPATCH3	Q96I76	525 aa		11.16	□□□□□ -0.62
MSL3-205	ENST00000380692	LNPK	Q9C0E8	428 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms