RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 BEND3Q5T5X7 828 aa29.32■■■□□ 2.28
U2AF1-202ENST00000380276 ZBED3Q96IU2 234 aaPredicted RBP29.32■■■□□ 2.28
U2AF1-202ENST00000380276 ZNF594Q96JF6 807 aaPredicted RBP29.32■■■□□ 2.28
U2AF1-202ENST00000380276 CNNM1Q9NRU3 951 aa29.32■■■□□ 2.28
U2AF1-202ENST00000380276 HPS5Q9UPZ3 1129 aa29.32■■■□□ 2.28
U2AF1-202ENST00000380276 COL1A1P02452 1464 aaPredicted RBP29.31■■■□□ 2.28
U2AF1-202ENST00000380276 CLRN2A0PK11 232 aa29.31■■■□□ 2.28
U2AF1-202ENST00000380276 GPR25O00155 361 aa29.31■■■□□ 2.28
U2AF1-202ENST00000380276 MYO1BO43795 1136 aa29.31■■■□□ 2.28
U2AF1-202ENST00000380276 VEZTQ9HBM0 779 aa29.31■■■□□ 2.28
U2AF1-202ENST00000380276 PCDHAC2Q9Y5I4 1007 aa29.31■■■□□ 2.28
U2AF1-202ENST00000380276 SLC34A2O95436 690 aa29.3■■■□□ 2.28
U2AF1-202ENST00000380276 RBM5P52756 815 aaKnown RBP eCLIP29.3■■■□□ 2.28
U2AF1-202ENST00000380276 PKN2Q16513 984 aaKnown RBP29.3■■■□□ 2.28
U2AF1-202ENST00000380276 CFAP100Q494V2 611 aa29.3■■■□□ 2.28
U2AF1-202ENST00000380276 LDHAL6AQ6ZMR3 332 aa29.3■■■□□ 2.28
U2AF1-202ENST00000380276 C9orf78Q9NZ63 289 aaPredicted RBP29.3■■■□□ 2.28
U2AF1-202ENST00000380276 IRS2Q9Y4H2 1338 aa29.29■■■□□ 2.28
U2AF1-202ENST00000380276 SLC4A10Q6U841 1118 aa29.29■■■□□ 2.28
U2AF1-202ENST00000380276 C15orf52Q6ZUT6 534 aaKnown RBP29.29■■■□□ 2.28
U2AF1-202ENST00000380276 GRM8O00222 908 aa29.28■■■□□ 2.28
U2AF1-202ENST00000380276 EPHA10Q5JZY3 1008 aa29.28■■■□□ 2.28
U2AF1-202ENST00000380276 SPRYD7Q5W111 196 aa29.28■■■□□ 2.28
U2AF1-202ENST00000380276 SLC10A4Q96EP9 437 aa29.28■■■□□ 2.28
U2AF1-202ENST00000380276 PPP1R12BO60237 982 aaPredicted RBP29.27■■■□□ 2.28
U2AF1-202ENST00000380276 IL1R1P14778 569 aa29.27■■■□□ 2.28
U2AF1-202ENST00000380276 LDLRAD1Q5T700 205 aa29.27■■■□□ 2.28
U2AF1-202ENST00000380276 ECM29Q5VYK3 1845 aa29.27■■■□□ 2.28
U2AF1-202ENST00000380276 MTMR14Q8NCE2 650 aa29.26■■■□□ 2.27
U2AF1-202ENST00000380276 PPP2R3BQ9Y5P8 575 aa29.26■■■□□ 2.27
U2AF1-202ENST00000380276 FKTNO75072 461 aa29.25■■■□□ 2.27
U2AF1-202ENST00000380276 SPINK5Q9NQ38 1064 aaPredicted RBP29.25■■■□□ 2.27
U2AF1-202ENST00000380276 SPDYE2BA6NHP3 402 aa29.24■■■□□ 2.27
U2AF1-202ENST00000380276 SPDYE6P0CI01 402 aa29.24■■■□□ 2.27
U2AF1-202ENST00000380276 PRMT6Q96LA8 375 aaPredicted RBP29.24■■■□□ 2.27
U2AF1-202ENST00000380276 MANSC4A6NHS7 340 aaPredicted RBP29.23■■■□□ 2.27
U2AF1-202ENST00000380276 FKBP1AP62942 108 aaKnown RBP29.23■■■□□ 2.27
U2AF1-202ENST00000380276 SUPT20HL1Q3ZLR7 823 aa29.23■■■□□ 2.27
U2AF1-202ENST00000380276 CLMNQ96JQ2 1002 aa29.23■■■□□ 2.27
U2AF1-202ENST00000380276 SSC5DA1L4H1 1573 aa29.22■■■□□ 2.27
U2AF1-202ENST00000380276 ALDH1A1P00352 501 aa29.22■■■□□ 2.27
U2AF1-202ENST00000380276 FAM9BQ8IZU0 186 aa29.22■■■□□ 2.27
U2AF1-202ENST00000380276 SRCIN1Q9C0H9 1055 aa29.22■■■□□ 2.27
U2AF1-202ENST00000380276 R3HDMLQ9H3Y0 253 aa29.22■■■□□ 2.27
U2AF1-202ENST00000380276 NOM1Q5C9Z4 860 aaKnown RBP29.21■■■□□ 2.27
U2AF1-202ENST00000380276 NBPF12Q5TAG4 269 aaPredicted RBP29.21■■■□□ 2.27
U2AF1-202ENST00000380276 FBXO46Q6PJ61 603 aaPredicted RBP29.21■■■□□ 2.27
U2AF1-202ENST00000380276 WNK4Q96J92 1243 aa29.21■■■□□ 2.27
U2AF1-202ENST00000380276 GYG1P46976 350 aa29.2■■■□□ 2.26
U2AF1-202ENST00000380276 AOX1Q06278 1338 aa29.2■■■□□ 2.26
U2AF1-202ENST00000380276 ALDH1L1O75891 902 aa29.19■■■□□ 2.26
U2AF1-202ENST00000380276 IREB2P48200 963 aaKnown RBP29.19■■■□□ 2.26
U2AF1-202ENST00000380276 MAP3K11Q16584 847 aa29.19■■■□□ 2.26
U2AF1-202ENST00000380276 MFSD14BQ5SR56 506 aa29.19■■■□□ 2.26
U2AF1-202ENST00000380276 IFNL1Q8IU54 200 aa29.19■■■□□ 2.26
U2AF1-202ENST00000380276 SUCLG2Q96I99 432 aa29.19■■■□□ 2.26
U2AF1-202ENST00000380276 ZBTB48P10074 688 aaPredicted RBP29.18■■■□□ 2.26
U2AF1-202ENST00000380276 HIBADHP31937 336 aaKnown RBP29.18■■■□□ 2.26
U2AF1-202ENST00000380276 INHBEP58166 350 aa29.18■■■□□ 2.26
U2AF1-202ENST00000380276 RASA3Q14644 834 aa29.18■■■□□ 2.26
U2AF1-202ENST00000380276 CFHR5Q9BXR6 569 aa29.18■■■□□ 2.26
U2AF1-202ENST00000380276 TTF2Q9UNY4 1162 aaKnown RBP29.18■■■□□ 2.26
U2AF1-202ENST00000380276 PUS3Q9BZE2 481 aaKnown RBP29.17■■■□□ 2.26
U2AF1-202ENST00000380276 UBE4AQ14139 1066 aa29.16■■■□□ 2.26
U2AF1-202ENST00000380276 FAM205AQ6ZU69 1335 aa29.16■■■□□ 2.26
U2AF1-202ENST00000380276 TNRC18O15417 2968 aaPredicted RBP29.15■■■□□ 2.26
U2AF1-202ENST00000380276 TNFAIP1Q13829 316 aa29.15■■■□□ 2.26
U2AF1-202ENST00000380276 VPS37DQ86XT2 251 aa29.15■■■□□ 2.26
U2AF1-202ENST00000380276 TDRD7Q8NHU6 1098 aaKnown RBP29.15■■■□□ 2.26
U2AF1-202ENST00000380276 TDRD3Q9H7E2 651 aaKnown RBP29.15■■■□□ 2.26
U2AF1-202ENST00000380276 TRIM17Q9Y577 477 aa29.15■■■□□ 2.26
U2AF1-202ENST00000380276 IGF2BP3O00425 579 aaKnown RBP eCLIP29.14■■■□□ 2.26
U2AF1-202ENST00000380276 ANKRD13AQ8IZ07 590 aa29.14■■■□□ 2.26
U2AF1-202ENST00000380276 ZNF70Q9UC06 446 aaPredicted RBP29.14■■■□□ 2.26
U2AF1-202ENST00000380276 FRAT2O75474 233 aaPredicted RBP29.13■■■□□ 2.25
U2AF1-202ENST00000380276 USP2O75604 605 aaPredicted RBP29.13■■■□□ 2.25
U2AF1-202ENST00000380276 CHAF1AQ13111 956 aaPredicted RBP29.13■■■□□ 2.25
U2AF1-202ENST00000380276 OTUD7BQ6GQQ9 843 aa29.13■■■□□ 2.25
U2AF1-202ENST00000380276 IQSEC3Q9UPP2 1182 aaPredicted RBP29.13■■■□□ 2.25
U2AF1-202ENST00000380276 TCP10L2B9ZVM9 353 aa29.12■■■□□ 2.25
U2AF1-202ENST00000380276 NBPF7P0C2Y1 421 aaPredicted RBP29.12■■■□□ 2.25
U2AF1-202ENST00000380276 SPDYE2Q495Y8 402 aa29.12■■■□□ 2.25
U2AF1-202ENST00000380276 FAM84BQ96KN1 310 aaPredicted RBP29.12■■■□□ 2.25
U2AF1-202ENST00000380276 ELP3Q9H9T3 547 aa29.12■■■□□ 2.25
U2AF1-202ENST00000380276 SERPINA10Q9UK55 444 aa29.12■■■□□ 2.25
U2AF1-202ENST00000380276 ZNF316A6NFI3 1004 aaPredicted RBP29.11■■■□□ 2.25
U2AF1-202ENST00000380276 UNCXA6NJT0 531 aa29.11■■■□□ 2.25
U2AF1-202ENST00000380276 MROH5Q6ZUA9 1318 aa29.11■■■□□ 2.25
U2AF1-202ENST00000380276 GJA5P36382 358 aa29.1■■■□□ 2.25
U2AF1-202ENST00000380276 CRKP46108 304 aa29.1■■■□□ 2.25
U2AF1-202ENST00000380276 METTL24Q5JXM2 366 aa29.1■■■□□ 2.25
U2AF1-202ENST00000380276 DZIP1LQ8IYY4 767 aaKnown RBP29.1■■■□□ 2.25
U2AF1-202ENST00000380276 BICC1Q9H694 974 aaKnown RBP29.1■■■□□ 2.25
U2AF1-202ENST00000380276 ARAP2Q8WZ64 1704 aa29.1■■■□□ 2.25
U2AF1-202ENST00000380276 PRPF38BQ5VTL8 546 aaKnown RBP29.09■■■□□ 2.25
U2AF1-202ENST00000380276 OPTNQ96CV9 577 aa29.09■■■□□ 2.25
U2AF1-202ENST00000380276 KAZALD1Q96I82 304 aa29.09■■■□□ 2.25
U2AF1-202ENST00000380276 TNNI2P48788 182 aa29.08■■■□□ 2.25
U2AF1-202ENST00000380276 ERO1AQ96HE7 468 aa29.08■■■□□ 2.25
U2AF1-202ENST00000380276 OTOFQ9HC10 1997 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms