RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 NAP1L4Q99733 375 aaKnown RBP14.93□□□□□ -0.02
HIPK3-202ENST00000379016 UTP14CQ5TAP6 766 aaKnown RBP14.93□□□□□ -0.02
HIPK3-202ENST00000379016 SPDL1Q96EA4 605 aa14.93□□□□□ -0.02
HIPK3-202ENST00000379016 STX10O60499 249 aa14.93□□□□□ -0.02
HIPK3-202ENST00000379016 GABPB2Q8TAK5 448 aaPredicted RBP14.93□□□□□ -0.02
HIPK3-202ENST00000379016 RAPGEF1Q13905 1077 aa14.93□□□□□ -0.02
HIPK3-202ENST00000379016 SLC12A5Q9H2X9 1139 aa14.93□□□□□ -0.02
HIPK3-202ENST00000379016 GPHNQ9NQX3 736 aaPredicted RBP14.93□□□□□ -0.02
HIPK3-202ENST00000379016 CCDC7Q96M83 1385 aa14.93□□□□□ -0.02
HIPK3-202ENST00000379016 RNASE9P60153 205 aaKnown RBP14.93□□□□□ -0.02
HIPK3-202ENST00000379016 FAM180AQ6UWF9 173 aa14.93□□□□□ -0.02
HIPK3-202ENST00000379016 POMGNT1Q8WZA1 660 aa14.93□□□□□ -0.02
HIPK3-202ENST00000379016 SCAND2PQ9GZW5 306 aaPredicted RBP14.93□□□□□ -0.02
HIPK3-202ENST00000379016 C6orf50Q9HD87 102 aa14.93□□□□□ -0.02
HIPK3-202ENST00000379016 KANK3Q6NY19 840 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 BSPRYQ5W0U4 402 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 MFSD6Q6ZSS7 791 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 FAM200AQ8TCP9 573 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 RMND1Q9NWS8 449 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 RHOXF2BP0C7M4 288 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 IARSP41252 1262 aaKnown RBP14.92□□□□□ -0.02
HIPK3-202ENST00000379016 METAP2P50579 478 aaKnown RBP eCLIP14.92□□□□□ -0.02
HIPK3-202ENST00000379016 SEL1L2Q5TEA6 688 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 RHOXF2Q9BQY4 288 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 CEP128Q6ZU80 1094 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 USP16Q9Y5T5 823 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 ASIC1P78348 528 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 TRIM35Q9UPQ4 493 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 GPR161Q8N6U8 529 aaKnown RBP14.92□□□□□ -0.02
HIPK3-202ENST00000379016 ZSCAN32Q9NX65 697 aa14.92□□□□□ -0.02
HIPK3-202ENST00000379016 UBE3BQ7Z3V4 1068 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 KRT3P12035 628 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 RIOK1Q9BRS2 568 aaKnown RBP14.91□□□□□ -0.02
HIPK3-202ENST00000379016 MTUS1Q9ULD2 1270 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 FAM170AA1A519 330 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 HMGB1P1B2RPK0 211 aaPredicted RBP14.91□□□□□ -0.02
HIPK3-202ENST00000379016 OPHN1O60890 802 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 CLNS1AP54105 237 aaKnown RBP14.91□□□□□ -0.02
HIPK3-202ENST00000379016 BIRC3Q13489 604 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 TRPC3Q13507 836 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 IQSEC3Q9UPP2 1182 aaPredicted RBP14.91□□□□□ -0.02
HIPK3-202ENST00000379016 CCDC171Q6TFL3 1326 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 SLC12A2P55011 1212 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 PDCD2Q16342 344 aaPredicted RBP14.91□□□□□ -0.02
HIPK3-202ENST00000379016 OGFOD1Q8N543 542 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 GOLGA6BA6NDN3 693 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 SKAP1Q86WV1 359 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 RABEP2Q9H5N1 569 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 DNAI1Q9UI46 699 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 BAG5Q9UL15 447 aa14.91□□□□□ -0.02
HIPK3-202ENST00000379016 RFC4P35249 363 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 B4DLN1 442 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 MRPL12P52815 198 aaKnown RBP14.9□□□□□ -0.02
HIPK3-202ENST00000379016 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
HIPK3-202ENST00000379016 IFIT1BQ5T764 474 aaKnown RBP14.9□□□□□ -0.02
HIPK3-202ENST00000379016 NEK11Q8NG66 645 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 VCX3AQ9NNX9 186 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 NOP14P78316 857 aaKnown RBP14.9□□□□□ -0.02
HIPK3-202ENST00000379016 FNBP1Q96RU3 617 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 SPDYE3A6NKU9 549 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 STK25O00506 426 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 OATP04181 439 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 SNRKQ9NRH2 765 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 HAUS2Q9NVX0 235 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 PTPRGP23470 1445 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 CCDC102BQ68D86 513 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 ST5P78524 1137 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 ACSBG1Q96GR2 724 aa14.9□□□□□ -0.02
HIPK3-202ENST00000379016 PYM1Q9BRP8 204 aaKnown RBP14.9□□□□□ -0.02
HIPK3-202ENST00000379016 HAUS8Q9BT25 410 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 GUCA1BQ9UMX6 200 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 APOEP02649 317 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 HMGB1P09429 215 aaKnown RBP14.89□□□□□ -0.03
HIPK3-202ENST00000379016 ITKQ08881 620 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 AAMPQ13685 434 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 KSR1Q8IVT5 923 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 RNF168Q8IYW5 571 aaPredicted RBP14.89□□□□□ -0.03
HIPK3-202ENST00000379016 SPC25Q9HBM1 224 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 KARSQ15046 597 aaKnown RBP14.89□□□□□ -0.03
HIPK3-202ENST00000379016 RILPL1Q5EBL4 403 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 SCHIP1Q9P0W5 487 aaPredicted RBP14.89□□□□□ -0.03
HIPK3-202ENST00000379016 VPS8Q8N3P4 1428 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 ATP5DP30049 168 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 ZNF830Q96NB3 372 aaPredicted RBP14.89□□□□□ -0.03
HIPK3-202ENST00000379016 NUB1Q9Y5A7 615 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 GOLGA6CA6NDK9 693 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 GOLGA6DP0CG33 693 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 MCM4P33991 863 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 MAP3K7CLP57077 242 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 WDR44Q5JSH3 913 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 AFAP1Q8N556 730 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 GOLGA6AQ9NYA3 693 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 GSTA1P08263 222 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 GSTA2P09210 222 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 PPP2R5AQ15172 486 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 USH1CQ9Y6N9 552 aa14.89□□□□□ -0.03
HIPK3-202ENST00000379016 SYKP43405 635 aa14.88□□□□□ -0.03
HIPK3-202ENST00000379016 NFKBIL1Q9UBC1 381 aaPredicted RBP14.88□□□□□ -0.03
HIPK3-202ENST00000379016 NR1H4Q96RI1 486 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms