RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PUS3Q9BZE2 481 aaKnown RBP23.81■■□□□ 1.4
TMEM88B-201ENST00000378821 SASH1O94885 1247 aa23.8■■□□□ 1.4
TMEM88B-201ENST00000378821 SMC4Q9NTJ3 1288 aa23.8■■□□□ 1.4
TMEM88B-201ENST00000378821 MROH5Q6ZUA9 1318 aa23.8■■□□□ 1.4
TMEM88B-201ENST00000378821 SLC10A3P09131 477 aa23.79■■□□□ 1.4
TMEM88B-201ENST00000378821 TDRD7Q8NHU6 1098 aaKnown RBP23.79■■□□□ 1.4
TMEM88B-201ENST00000378821 ECM29Q5VYK3 1845 aa23.79■■□□□ 1.4
TMEM88B-201ENST00000378821 FAM205AQ6ZU69 1335 aa23.79■■□□□ 1.4
TMEM88B-201ENST00000378821 PLIN1O60240 522 aa23.78■■□□□ 1.4
TMEM88B-201ENST00000378821 ZNF157P51786 506 aaPredicted RBP23.78■■□□□ 1.4
TMEM88B-201ENST00000378821 VGLL2Q8N8G2 317 aa23.77■■□□□ 1.4
TMEM88B-201ENST00000378821 FAM84BQ96KN1 310 aaPredicted RBP23.77■■□□□ 1.4
TMEM88B-201ENST00000378821 SCAF8Q9UPN6 1271 aaKnown RBP23.77■■□□□ 1.4
TMEM88B-201ENST00000378821 APOBEC3FQ8IUX4 373 aaKnown RBP23.76■■□□□ 1.39
TMEM88B-201ENST00000378821 COL1A1P02452 1464 aaPredicted RBP23.75■■□□□ 1.39
TMEM88B-201ENST00000378821 RARSP54136 660 aaKnown RBP23.75■■□□□ 1.39
TMEM88B-201ENST00000378821 KIF23Q02241 960 aaPredicted RBP23.75■■□□□ 1.39
TMEM88B-201ENST00000378821 HIBADHP31937 336 aaKnown RBP23.74■■□□□ 1.39
TMEM88B-201ENST00000378821 DLGAP5Q15398 846 aa23.74■■□□□ 1.39
TMEM88B-201ENST00000378821 LRRC24Q50LG9 513 aa23.74■■□□□ 1.39
TMEM88B-201ENST00000378821 PRAMEF18Q5VWM3 479 aa23.74■■□□□ 1.39
TMEM88B-201ENST00000378821 FBXO33Q7Z6M2 555 aa23.74■■□□□ 1.39
TMEM88B-201ENST00000378821 RASAL3Q86YV0 1011 aa23.74■■□□□ 1.39
TMEM88B-201ENST00000378821 REM2Q8IYK8 340 aaPredicted RBP23.74■■□□□ 1.39
TMEM88B-201ENST00000378821 SAGE1Q9NXZ1 904 aa23.74■■□□□ 1.39
TMEM88B-201ENST00000378821 ARAP2Q8WZ64 1704 aa23.73■■□□□ 1.39
TMEM88B-201ENST00000378821 CAPN15O75808 1086 aa23.73■■□□□ 1.39
TMEM88B-201ENST00000378821 PDE8BO95263 885 aa23.73■■□□□ 1.39
TMEM88B-201ENST00000378821 GYG1P46976 350 aa23.73■■□□□ 1.39
TMEM88B-201ENST00000378821 TSKSQ9UJT2 592 aa23.73■■□□□ 1.39
TMEM88B-201ENST00000378821 SPDYE2BA6NHP3 402 aa23.72■■□□□ 1.39
TMEM88B-201ENST00000378821 SPDYE6P0CI01 402 aa23.72■■□□□ 1.39
TMEM88B-201ENST00000378821 RFX5P48382 616 aaPredicted RBP23.72■■□□□ 1.39
TMEM88B-201ENST00000378821 MOB2Q70IA6 237 aa23.72■■□□□ 1.39
TMEM88B-201ENST00000378821 CSRNP1Q96S65 589 aa23.72■■□□□ 1.39
TMEM88B-201ENST00000378821 NOB1Q9ULX3 412 aaKnown RBP23.72■■□□□ 1.39
TMEM88B-201ENST00000378821 AKAP11Q9UKA4 1901 aa23.72■■□□□ 1.39
TMEM88B-201ENST00000378821 PRMT6Q96LA8 375 aaPredicted RBP23.71■■□□□ 1.39
TMEM88B-201ENST00000378821 KIF16BQ96L93 1317 aa23.7■■□□□ 1.38
TMEM88B-201ENST00000378821 UBE2Q2LH0YL09 131 aa23.7■■□□□ 1.38
TMEM88B-201ENST00000378821 NF2P35240 595 aa23.7■■□□□ 1.38
TMEM88B-201ENST00000378821 CFAP100Q494V2 611 aa23.7■■□□□ 1.38
TMEM88B-201ENST00000378821 DEFB129Q9H1M3 183 aa23.7■■□□□ 1.38
TMEM88B-201ENST00000378821 PCDHAC2Q9Y5I4 1007 aa23.7■■□□□ 1.38
TMEM88B-201ENST00000378821 PPP2R3BQ9Y5P8 575 aa23.7■■□□□ 1.38
TMEM88B-201ENST00000378821 CASP8AP2Q9UKL3 1982 aa23.69■■□□□ 1.38
TMEM88B-201ENST00000378821 FGFR2P21802 821 aa23.69■■□□□ 1.38
TMEM88B-201ENST00000378821 METTL24Q5JXM2 366 aa23.69■■□□□ 1.38
TMEM88B-201ENST00000378821 MFSD14BQ5SR56 506 aa23.69■■□□□ 1.38
TMEM88B-201ENST00000378821 LDLRAD1Q5T700 205 aa23.69■■□□□ 1.38
TMEM88B-201ENST00000378821 KLHDC4Q8TBB5 520 aa23.69■■□□□ 1.38
TMEM88B-201ENST00000378821 ARHGAP45Q92619 1136 aa23.69■■□□□ 1.38
TMEM88B-201ENST00000378821 API5Q9BZZ5 524 aaKnown RBP23.69■■□□□ 1.38
TMEM88B-201ENST00000378821 SERPINA10Q9UK55 444 aa23.69■■□□□ 1.38
TMEM88B-201ENST00000378821 F8W031 263 aaPredicted RBP23.68■■□□□ 1.38
TMEM88B-201ENST00000378821 PTPN12Q05209 780 aaKnown RBP23.68■■□□□ 1.38
TMEM88B-201ENST00000378821 RNF186Q9NXI6 227 aa23.68■■□□□ 1.38
TMEM88B-201ENST00000378821 JAG2Q9Y219 1238 aa23.68■■□□□ 1.38
TMEM88B-201ENST00000378821 AOX1Q06278 1338 aa23.67■■□□□ 1.38
TMEM88B-201ENST00000378821 MYO1BO43795 1136 aa23.67■■□□□ 1.38
TMEM88B-201ENST00000378821 MAP3K11Q16584 847 aa23.67■■□□□ 1.38
TMEM88B-201ENST00000378821 ABHD8Q96I13 439 aa23.67■■□□□ 1.38
TMEM88B-201ENST00000378821 FBXO3Q9UK99 471 aa23.67■■□□□ 1.38
TMEM88B-201ENST00000378821 EYA2O00167 538 aa23.66■■□□□ 1.38
TMEM88B-201ENST00000378821 BCAR3O75815 825 aa23.66■■□□□ 1.38
TMEM88B-201ENST00000378821 CAVIN4Q5BKX8 364 aa23.66■■□□□ 1.38
TMEM88B-201ENST00000378821 ATG9AQ7Z3C6 839 aa23.66■■□□□ 1.38
TMEM88B-201ENST00000378821 SSC5DA1L4H1 1573 aa23.65■■□□□ 1.38
TMEM88B-201ENST00000378821 UBTFL1P0CB47 393 aaPredicted RBP23.65■■□□□ 1.38
TMEM88B-201ENST00000378821 PUM3Q15397 648 aaKnown RBP23.65■■□□□ 1.38
TMEM88B-201ENST00000378821 ARMC9Q7Z3E5 817 aa23.65■■□□□ 1.38
TMEM88B-201ENST00000378821 TTF2Q9UNY4 1162 aaKnown RBP23.65■■□□□ 1.38
TMEM88B-201ENST00000378821 UNCXA6NJT0 531 aa23.64■■□□□ 1.37
TMEM88B-201ENST00000378821 TM4SF4P48230 202 aa23.64■■□□□ 1.37
TMEM88B-201ENST00000378821 HDLBPQ00341 1268 aaKnown RBP23.64■■□□□ 1.37
TMEM88B-201ENST00000378821 TTLL12Q14166 644 aaPredicted RBP23.64■■□□□ 1.37
TMEM88B-201ENST00000378821 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
TMEM88B-201ENST00000378821 MRIQ9BWK5 157 aa23.64■■□□□ 1.37
TMEM88B-201ENST00000378821 HDAC5Q9UQL6 1122 aa23.64■■□□□ 1.37
TMEM88B-201ENST00000378821 LAMB1P07942 1786 aa23.63■■□□□ 1.37
TMEM88B-201ENST00000378821 TRPA1O75762 1119 aa23.63■■□□□ 1.37
TMEM88B-201ENST00000378821 CIAO1O76071 339 aa23.63■■□□□ 1.37
TMEM88B-201ENST00000378821 SPDYE2Q495Y8 402 aa23.63■■□□□ 1.37
TMEM88B-201ENST00000378821 VPS37DQ86XT2 251 aa23.63■■□□□ 1.37
TMEM88B-201ENST00000378821 TBC1D22AQ8WUA7 517 aa23.63■■□□□ 1.37
TMEM88B-201ENST00000378821 CLRN2A0PK11 232 aa23.62■■□□□ 1.37
TMEM88B-201ENST00000378821 BCAMP50895 628 aa23.62■■□□□ 1.37
TMEM88B-201ENST00000378821 GRIK5Q16478 980 aa23.62■■□□□ 1.37
TMEM88B-201ENST00000378821 ZBTB22O15209 634 aa23.61■■□□□ 1.37
TMEM88B-201ENST00000378821 IFIT1P09914 478 aaKnown RBP23.61■■□□□ 1.37
TMEM88B-201ENST00000378821 SUPT20HL1Q3ZLR7 823 aa23.61■■□□□ 1.37
TMEM88B-201ENST00000378821 DZIP1LQ8IYY4 767 aaKnown RBP23.61■■□□□ 1.37
TMEM88B-201ENST00000378821 LPIN2Q92539 896 aa23.61■■□□□ 1.37
TMEM88B-201ENST00000378821 ZNF70Q9UC06 446 aaPredicted RBP23.61■■□□□ 1.37
TMEM88B-201ENST00000378821 SUGT1Q9Y2Z0 365 aa23.61■■□□□ 1.37
TMEM88B-201ENST00000378821 CRKP46108 304 aa23.6■■□□□ 1.37
TMEM88B-201ENST00000378821 RBM5P52756 815 aaKnown RBP eCLIP23.6■■□□□ 1.37
TMEM88B-201ENST00000378821 RASA3Q14644 834 aa23.6■■□□□ 1.37
TMEM88B-201ENST00000378821 ANGEL1Q9UNK9 670 aaKnown RBP23.6■■□□□ 1.37
TMEM88B-201ENST00000378821 IQSEC3Q9UPP2 1182 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms