RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 H7C1D1 291 aa27.93■■■□□ 2.06
YIF1A-202ENST00000376899 ZNF280AP59817 542 aaPredicted RBP27.93■■■□□ 2.06
YIF1A-202ENST00000376899 USP50Q70EL3 339 aaPredicted RBP27.93■■■□□ 2.06
YIF1A-202ENST00000376899 COL1A1P02452 1464 aaPredicted RBP27.92■■■□□ 2.06
YIF1A-202ENST00000376899 PHKA1P46020 1223 aa27.92■■■□□ 2.06
YIF1A-202ENST00000376899 CCDC102BQ68D86 513 aa27.92■■■□□ 2.06
YIF1A-202ENST00000376899 CERS5Q8N5B7 392 aa27.92■■■□□ 2.06
YIF1A-202ENST00000376899 IQSEC3Q9UPP2 1182 aaPredicted RBP27.92■■■□□ 2.06
YIF1A-202ENST00000376899 RAB11FIP3O75154 756 aa27.91■■■□□ 2.06
YIF1A-202ENST00000376899 POTEIP0CG38 1075 aa27.91■■■□□ 2.06
YIF1A-202ENST00000376899 POTEJP0CG39 1038 aa27.91■■■□□ 2.06
YIF1A-202ENST00000376899 MMP14P50281 582 aa27.91■■■□□ 2.06
YIF1A-202ENST00000376899 LDHDQ86WU2 507 aa27.91■■■□□ 2.06
YIF1A-202ENST00000376899 RHPN1Q8TCX5 695 aa27.91■■■□□ 2.06
YIF1A-202ENST00000376899 SEMA3EO15041 775 aa27.9■■■□□ 2.06
YIF1A-202ENST00000376899 USP17L8P0C7I0 530 aa27.9■■■□□ 2.06
YIF1A-202ENST00000376899 TRPM4Q8TD43 1214 aa27.9■■■□□ 2.06
YIF1A-202ENST00000376899 KIF1BPQ96EK5 621 aa27.9■■■□□ 2.06
YIF1A-202ENST00000376899 NEUROD6Q96NK8 337 aa27.9■■■□□ 2.06
YIF1A-202ENST00000376899 GNL3LQ9NVN8 582 aaKnown RBP27.9■■■□□ 2.06
YIF1A-202ENST00000376899 JAG2Q9Y219 1238 aa27.9■■■□□ 2.06
YIF1A-202ENST00000376899 EAPPQ56P03 285 aaPredicted RBP27.89■■■□□ 2.06
YIF1A-202ENST00000376899 EXOC6Q8TAG9 804 aa27.89■■■□□ 2.06
YIF1A-202ENST00000376899 FRAT2O75474 233 aaPredicted RBP27.88■■■□□ 2.05
YIF1A-202ENST00000376899 FSTL1Q12841 308 aa27.88■■■□□ 2.05
YIF1A-202ENST00000376899 MFSD14BQ5SR56 506 aa27.88■■■□□ 2.05
YIF1A-202ENST00000376899 SMC1BQ8NDV3 1235 aa27.88■■■□□ 2.05
YIF1A-202ENST00000376899 TBC1D22AQ8WUA7 517 aa27.88■■■□□ 2.05
YIF1A-202ENST00000376899 EAF2Q96CJ1 260 aaPredicted RBP27.88■■■□□ 2.05
YIF1A-202ENST00000376899 DCTPP1Q9H773 170 aa27.88■■■□□ 2.05
YIF1A-202ENST00000376899 HIRAP54198 1017 aaPredicted RBP27.87■■■□□ 2.05
YIF1A-202ENST00000376899 SAMD7Q7Z3H4 446 aa27.87■■■□□ 2.05
YIF1A-202ENST00000376899 PDS5AQ29RF7 1337 aaKnown RBP27.87■■■□□ 2.05
YIF1A-202ENST00000376899 EGFRP00533 1210 aa27.86■■■□□ 2.05
YIF1A-202ENST00000376899 C1QTNF8P60827 252 aa27.86■■■□□ 2.05
YIF1A-202ENST00000376899 CHAF1AQ13111 956 aaPredicted RBP27.86■■■□□ 2.05
YIF1A-202ENST00000376899 CHADLQ6NUI6 762 aa27.86■■■□□ 2.05
YIF1A-202ENST00000376899 KIAA0825Q8IV33 1275 aa27.86■■■□□ 2.05
YIF1A-202ENST00000376899 DBNDD2Q9BQY9 259 aa27.86■■■□□ 2.05
YIF1A-202ENST00000376899 DENND2AQ9ULE3 1009 aa27.86■■■□□ 2.05
YIF1A-202ENST00000376899 ARID4AP29374 1257 aaPredicted RBP27.85■■■□□ 2.05
YIF1A-202ENST00000376899 KIF4BQ2VIQ3 1234 aa27.85■■■□□ 2.05
YIF1A-202ENST00000376899 TBC1D10BQ4KMP7 808 aaPredicted RBP27.85■■■□□ 2.05
YIF1A-202ENST00000376899 MYOZ2Q9NPC6 264 aa27.85■■■□□ 2.05
YIF1A-202ENST00000376899 PGAP2Q9UHJ9 254 aa27.85■■■□□ 2.05
YIF1A-202ENST00000376899 DBNLQ9UJU6 430 aaKnown RBP27.85■■■□□ 2.05
YIF1A-202ENST00000376899 RASGRF1Q13972 1273 aa27.84■■■□□ 2.05
YIF1A-202ENST00000376899 GORABQ5T7V8 394 aa27.84■■■□□ 2.05
YIF1A-202ENST00000376899 OGFOD1Q8N543 542 aa27.84■■■□□ 2.05
YIF1A-202ENST00000376899 WDR66Q8TBY9 1149 aa27.84■■■□□ 2.05
YIF1A-202ENST00000376899 ZC3H15Q8WU90 426 aaKnown RBP27.84■■■□□ 2.05
YIF1A-202ENST00000376899 IL1RAPL2Q9NP60 686 aa27.84■■■□□ 2.05
YIF1A-202ENST00000376899 HDAC9Q9UKV0 1011 aa27.84■■■□□ 2.05
YIF1A-202ENST00000376899 AKAP11Q9UKA4 1901 aa27.84■■■□□ 2.05
YIF1A-202ENST00000376899 APBB1O00213 710 aa27.83■■■□□ 2.05
YIF1A-202ENST00000376899 HDAC1Q13547 482 aaPredicted RBP27.83■■■□□ 2.05
YIF1A-202ENST00000376899 TLR7Q9NYK1 1049 aaKnown RBP27.83■■■□□ 2.05
YIF1A-202ENST00000376899 SUGT1Q9Y2Z0 365 aa27.83■■■□□ 2.05
YIF1A-202ENST00000376899 SALL1Q9NSC2 1324 aa27.83■■■□□ 2.05
YIF1A-202ENST00000376899 UQCRFS1P1P0C7P4 283 aa27.82■■■□□ 2.04
YIF1A-202ENST00000376899 AACSQ86V21 672 aa27.82■■■□□ 2.04
YIF1A-202ENST00000376899 CLASRPQ8N2M8 674 aaKnown RBP27.82■■■□□ 2.04
YIF1A-202ENST00000376899 CCDC8Q9H0W5 538 aaPredicted RBP27.82■■■□□ 2.04
YIF1A-202ENST00000376899 CLEC11AQ9Y240 323 aa27.82■■■□□ 2.04
YIF1A-202ENST00000376899 ECM29Q5VYK3 1845 aa27.82■■■□□ 2.04
YIF1A-202ENST00000376899 GRIK5Q16478 980 aa27.81■■■□□ 2.04
YIF1A-202ENST00000376899 ZNF512BQ96KM6 892 aaPredicted RBP27.81■■■□□ 2.04
YIF1A-202ENST00000376899 LRRCC1Q9C099 1032 aa27.81■■■□□ 2.04
YIF1A-202ENST00000376899 CCDC158Q5M9N0 1113 aa27.8■■■□□ 2.04
YIF1A-202ENST00000376899 RBM26Q5T8P6 1007 aaKnown RBP27.8■■■□□ 2.04
YIF1A-202ENST00000376899 MTMR14Q8NCE2 650 aa27.8■■■□□ 2.04
YIF1A-202ENST00000376899 ZBED3Q96IU2 234 aaPredicted RBP27.8■■■□□ 2.04
YIF1A-202ENST00000376899 F8W031 263 aaPredicted RBP27.79■■■□□ 2.04
YIF1A-202ENST00000376899 IRX6P78412 446 aaPredicted RBP27.79■■■□□ 2.04
YIF1A-202ENST00000376899 HMG20BQ9P0W2 317 aa27.79■■■□□ 2.04
YIF1A-202ENST00000376899 TTF2Q9UNY4 1162 aaKnown RBP27.79■■■□□ 2.04
YIF1A-202ENST00000376899 POLR2AP24928 1970 aaKnown RBP27.79■■■□□ 2.04
YIF1A-202ENST00000376899 MCAMP43121 646 aa27.78■■■□□ 2.04
YIF1A-202ENST00000376899 SCARF1Q14162 830 aa27.78■■■□□ 2.04
YIF1A-202ENST00000376899 TTC39AQ5SRH9 613 aa27.78■■■□□ 2.04
YIF1A-202ENST00000376899 MAP1SQ66K74 1059 aaPredicted RBP27.78■■■□□ 2.04
YIF1A-202ENST00000376899 WNT10BO00744 389 aa27.77■■■□□ 2.04
YIF1A-202ENST00000376899 ZGPATQ8N5A5 531 aaKnown RBP27.77■■■□□ 2.04
YIF1A-202ENST00000376899 SPATA5Q8NB90 893 aa27.77■■■□□ 2.04
YIF1A-202ENST00000376899 SERPINA10Q9UK55 444 aa27.77■■■□□ 2.04
YIF1A-202ENST00000376899 MAST3O60307 1309 aa27.76■■■□□ 2.03
YIF1A-202ENST00000376899 ITGBL1O95965 494 aaPredicted RBP27.76■■■□□ 2.03
YIF1A-202ENST00000376899 HDLBPQ00341 1268 aaKnown RBP27.76■■■□□ 2.03
YIF1A-202ENST00000376899 CNTROBQ8N137 903 aa27.76■■■□□ 2.03
YIF1A-202ENST00000376899 MRIQ9BWK5 157 aa27.76■■■□□ 2.03
YIF1A-202ENST00000376899 PASKQ96RG2 1323 aa27.75■■■□□ 2.03
YIF1A-202ENST00000376899 CFAP100Q494V2 611 aa27.75■■■□□ 2.03
YIF1A-202ENST00000376899 ASTN2O75129 1339 aaPredicted RBP27.74■■■□□ 2.03
YIF1A-202ENST00000376899 PITPNM2Q9BZ72 1349 aa27.74■■■□□ 2.03
YIF1A-202ENST00000376899 SMARCA5O60264 1052 aaPredicted RBP27.74■■■□□ 2.03
YIF1A-202ENST00000376899 IFIT2P09913 472 aaKnown RBP27.74■■■□□ 2.03
YIF1A-202ENST00000376899 PRDX5P30044 214 aa27.74■■■□□ 2.03
YIF1A-202ENST00000376899 DLGAP5Q15398 846 aa27.74■■■□□ 2.03
YIF1A-202ENST00000376899 NBPF9Q3BBW0 867 aa27.74■■■□□ 2.03
YIF1A-202ENST00000376899 PI16Q6UXB8 463 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms