RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SLFN5Q08AF3 891 aa26.51■■□□□ 1.83
VSX1-201ENST00000376707 SSH1Q8WYL5 1049 aa26.51■■□□□ 1.83
VSX1-201ENST00000376707 CSRNP1Q96S65 589 aa26.51■■□□□ 1.83
VSX1-201ENST00000376707 BICC1Q9H694 974 aaKnown RBP26.51■■□□□ 1.83
VSX1-201ENST00000376707 F8W031 263 aaPredicted RBP26.5■■□□□ 1.83
VSX1-201ENST00000376707 TRPA1O75762 1119 aa26.5■■□□□ 1.83
VSX1-201ENST00000376707 FKBP1AP62942 108 aaKnown RBP26.5■■□□□ 1.83
VSX1-201ENST00000376707 UBE4AQ14139 1066 aa26.5■■□□□ 1.83
VSX1-201ENST00000376707 REM2Q8IYK8 340 aaPredicted RBP26.5■■□□□ 1.83
VSX1-201ENST00000376707 PUS3Q9BZE2 481 aaKnown RBP26.5■■□□□ 1.83
VSX1-201ENST00000376707 RNF186Q9NXI6 227 aa26.5■■□□□ 1.83
VSX1-201ENST00000376707 JAG2Q9Y219 1238 aa26.5■■□□□ 1.83
VSX1-201ENST00000376707 RABL6Q3YEC7 729 aaPredicted RBP26.48■■□□□ 1.83
VSX1-201ENST00000376707 MTMR14Q8NCE2 650 aa26.48■■□□□ 1.83
VSX1-201ENST00000376707 MROH5Q6ZUA9 1318 aa26.47■■□□□ 1.83
VSX1-201ENST00000376707 MCOLN1Q9GZU1 580 aa26.47■■□□□ 1.83
VSX1-201ENST00000376707 CCDC85CA6NKD9 419 aa26.46■■□□□ 1.83
VSX1-201ENST00000376707 MYO1BO43795 1136 aa26.46■■□□□ 1.83
VSX1-201ENST00000376707 HIBADHP31937 336 aaKnown RBP26.46■■□□□ 1.83
VSX1-201ENST00000376707 GYG1P46976 350 aa26.46■■□□□ 1.83
VSX1-201ENST00000376707 DGKZQ13574 1117 aa26.46■■□□□ 1.83
VSX1-201ENST00000376707 PRKG1Q13976 671 aa26.46■■□□□ 1.83
VSX1-201ENST00000376707 CFAP100Q494V2 611 aa26.46■■□□□ 1.83
VSX1-201ENST00000376707 ARMC9Q7Z3E5 817 aa26.46■■□□□ 1.83
VSX1-201ENST00000376707 CDCA7LQ96GN5 454 aa26.46■■□□□ 1.83
VSX1-201ENST00000376707 DEFB129Q9H1M3 183 aa26.46■■□□□ 1.83
VSX1-201ENST00000376707 RIPOR2Q9Y4F9 1068 aa26.46■■□□□ 1.83
VSX1-201ENST00000376707 FAM205AQ6ZU69 1335 aa26.45■■□□□ 1.83
VSX1-201ENST00000376707 COL1A1P02452 1464 aaPredicted RBP26.45■■□□□ 1.82
VSX1-201ENST00000376707 ALDH1L2Q3SY69 923 aa26.45■■□□□ 1.82
VSX1-201ENST00000376707 TRMT2AQ8IZ69 625 aaKnown RBP26.45■■□□□ 1.82
VSX1-201ENST00000376707 ANKRD44Q8N8A2 993 aa26.45■■□□□ 1.82
VSX1-201ENST00000376707 TDRD7Q8NHU6 1098 aaKnown RBP26.45■■□□□ 1.82
VSX1-201ENST00000376707 SPDYE2BA6NHP3 402 aa26.44■■□□□ 1.82
VSX1-201ENST00000376707 SPDYE6P0CI01 402 aa26.44■■□□□ 1.82
VSX1-201ENST00000376707 RBM5P52756 815 aaKnown RBP eCLIP26.44■■□□□ 1.82
VSX1-201ENST00000376707 FAM84BQ96KN1 310 aaPredicted RBP26.44■■□□□ 1.82
VSX1-201ENST00000376707 SMC4Q9NTJ3 1288 aa26.44■■□□□ 1.82
VSX1-201ENST00000376707 PCDHAC2Q9Y5I4 1007 aa26.44■■□□□ 1.82
VSX1-201ENST00000376707 CASP8AP2Q9UKL3 1982 aa26.44■■□□□ 1.82
VSX1-201ENST00000376707 CLRN2A0PK11 232 aa26.43■■□□□ 1.82
VSX1-201ENST00000376707 METTL24Q5JXM2 366 aa26.43■■□□□ 1.82
VSX1-201ENST00000376707 MFSD14BQ5SR56 506 aa26.43■■□□□ 1.82
VSX1-201ENST00000376707 USP44Q9H0E7 712 aa26.43■■□□□ 1.82
VSX1-201ENST00000376707 PPP2R3BQ9Y5P8 575 aa26.43■■□□□ 1.82
VSX1-201ENST00000376707 LRRC24Q50LG9 513 aa26.42■■□□□ 1.82
VSX1-201ENST00000376707 VPS37DQ86XT2 251 aa26.42■■□□□ 1.82
VSX1-201ENST00000376707 PRMT6Q96LA8 375 aaPredicted RBP26.42■■□□□ 1.82
VSX1-201ENST00000376707 VEZTQ9HBM0 779 aa26.42■■□□□ 1.82
VSX1-201ENST00000376707 ANGEL1Q9UNK9 670 aaKnown RBP26.42■■□□□ 1.82
VSX1-201ENST00000376707 PTPN12Q05209 780 aaKnown RBP26.41■■□□□ 1.82
VSX1-201ENST00000376707 MKRN3Q13064 507 aaKnown RBP26.4■■□□□ 1.82
VSX1-201ENST00000376707 TTF2Q9UNY4 1162 aaKnown RBP26.4■■□□□ 1.82
VSX1-201ENST00000376707 CAVIN4Q5BKX8 364 aa26.39■■□□□ 1.82
VSX1-201ENST00000376707 KLHDC4Q8TBB5 520 aa26.39■■□□□ 1.82
VSX1-201ENST00000376707 AKAP11Q9UKA4 1901 aa26.39■■□□□ 1.81
VSX1-201ENST00000376707 PPP1R12BO60237 982 aaPredicted RBP26.38■■□□□ 1.81
VSX1-201ENST00000376707 PDE8BO95263 885 aa26.38■■□□□ 1.81
VSX1-201ENST00000376707 LDLRAD1Q5T700 205 aa26.38■■□□□ 1.81
VSX1-201ENST00000376707 SERPINA10Q9UK55 444 aa26.38■■□□□ 1.81
VSX1-201ENST00000376707 FZD1Q9UP38 647 aa26.38■■□□□ 1.81
VSX1-201ENST00000376707 FRAT2O75474 233 aaPredicted RBP26.37■■□□□ 1.81
VSX1-201ENST00000376707 CT47B1P0C2W7 299 aaPredicted RBP26.37■■□□□ 1.81
VSX1-201ENST00000376707 SUPT20HL1Q3ZLR7 823 aa26.37■■□□□ 1.81
VSX1-201ENST00000376707 FBXO33Q7Z6M2 555 aa26.37■■□□□ 1.81
VSX1-201ENST00000376707 IQSEC3Q9UPP2 1182 aaPredicted RBP26.37■■□□□ 1.81
VSX1-201ENST00000376707 AOX1Q06278 1338 aa26.37■■□□□ 1.81
VSX1-201ENST00000376707 TM4SF4P48230 202 aa26.36■■□□□ 1.81
VSX1-201ENST00000376707 SREBF2Q12772 1141 aa26.36■■□□□ 1.81
VSX1-201ENST00000376707 CHAF1AQ13111 956 aaPredicted RBP26.36■■□□□ 1.81
VSX1-201ENST00000376707 VGLL2Q8N8G2 317 aa26.36■■□□□ 1.81
VSX1-201ENST00000376707 RASA3Q14644 834 aa26.35■■□□□ 1.81
VSX1-201ENST00000376707 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.35■■□□□ 1.81
VSX1-201ENST00000376707 SSC5DA1L4H1 1573 aa26.34■■□□□ 1.81
VSX1-201ENST00000376707 TNFAIP1Q13829 316 aa26.34■■□□□ 1.81
VSX1-201ENST00000376707 MAP3K11Q16584 847 aa26.34■■□□□ 1.81
VSX1-201ENST00000376707 NBPF12Q5TAG4 269 aaPredicted RBP26.34■■□□□ 1.81
VSX1-201ENST00000376707 SPRYD7Q5W111 196 aa26.34■■□□□ 1.81
VSX1-201ENST00000376707 SLC10A4Q96EP9 437 aa26.34■■□□□ 1.81
VSX1-201ENST00000376707 ECM29Q5VYK3 1845 aa26.34■■□□□ 1.81
VSX1-201ENST00000376707 TBC1D8O95759 1140 aa26.33■■□□□ 1.81
VSX1-201ENST00000376707 IFIT1P09914 478 aaKnown RBP26.33■■□□□ 1.81
VSX1-201ENST00000376707 UBTFL1P0CB47 393 aaPredicted RBP26.33■■□□□ 1.81
VSX1-201ENST00000376707 CRKP46108 304 aa26.33■■□□□ 1.81
VSX1-201ENST00000376707 PUM3Q15397 648 aaKnown RBP26.33■■□□□ 1.81
VSX1-201ENST00000376707 SPDYE2Q495Y8 402 aa26.33■■□□□ 1.81
VSX1-201ENST00000376707 TBC1D22AQ8WUA7 517 aa26.33■■□□□ 1.81
VSX1-201ENST00000376707 TDRD3Q9H7E2 651 aaKnown RBP26.33■■□□□ 1.81
VSX1-201ENST00000376707 ZNF70Q9UC06 446 aaPredicted RBP26.33■■□□□ 1.81
VSX1-201ENST00000376707 NOB1Q9ULX3 412 aaKnown RBP26.33■■□□□ 1.81
VSX1-201ENST00000376707 EYA2O00167 538 aa26.32■■□□□ 1.8
VSX1-201ENST00000376707 BCAMP50895 628 aa26.32■■□□□ 1.8
VSX1-201ENST00000376707 DZIP1LQ8IYY4 767 aaKnown RBP26.32■■□□□ 1.8
VSX1-201ENST00000376707 IREB2P48200 963 aaKnown RBP26.31■■□□□ 1.8
VSX1-201ENST00000376707 RFX5P48382 616 aaPredicted RBP26.31■■□□□ 1.8
VSX1-201ENST00000376707 CTU1Q7Z7A3 348 aaKnown RBP26.31■■□□□ 1.8
VSX1-201ENST00000376707 API5Q9BZZ5 524 aaKnown RBP26.31■■□□□ 1.8
VSX1-201ENST00000376707 UNCXA6NJT0 531 aa26.3■■□□□ 1.8
VSX1-201ENST00000376707 GRIK5Q16478 980 aa26.3■■□□□ 1.8
VSX1-201ENST00000376707 CLMNQ96JQ2 1002 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms