RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 UBE2Q2LH0YL09 131 aa18.58■□□□□ 0.56
HDAC6-204ENST00000376643 PPP1R12BO60237 982 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-204ENST00000376643 MLLT1Q03111 559 aaPredicted RBP18.58■□□□□ 0.56
HDAC6-204ENST00000376643 TNFAIP1Q13829 316 aa18.58■□□□□ 0.56
HDAC6-204ENST00000376643 SUPT20HL1Q3ZLR7 823 aa18.58■□□□□ 0.56
HDAC6-204ENST00000376643 DEFB129Q9H1M3 183 aa18.58■□□□□ 0.56
HDAC6-204ENST00000376643 UTYO14607 1347 aa18.57■□□□□ 0.56
HDAC6-204ENST00000376643 ZNF521Q96K83 1311 aa18.57■□□□□ 0.56
HDAC6-204ENST00000376643 PLIN1O60240 522 aa18.57■□□□□ 0.56
HDAC6-204ENST00000376643 ALDH1A1P00352 501 aa18.57■□□□□ 0.56
HDAC6-204ENST00000376643 RGS19P49795 217 aa18.57■□□□□ 0.56
HDAC6-204ENST00000376643 PKN2Q16513 984 aaKnown RBP18.57■□□□□ 0.56
HDAC6-204ENST00000376643 NOM1Q5C9Z4 860 aaKnown RBP18.57■□□□□ 0.56
HDAC6-204ENST00000376643 CTU1Q7Z7A3 348 aaKnown RBP18.57■□□□□ 0.56
HDAC6-204ENST00000376643 ZNF646O15015 1829 aaPredicted RBP18.57■□□□□ 0.56
HDAC6-204ENST00000376643 CASP8AP2Q9UKL3 1982 aa18.57■□□□□ 0.56
HDAC6-204ENST00000376643 FAM205AQ6ZU69 1335 aa18.56■□□□□ 0.56
HDAC6-204ENST00000376643 HIBADHP31937 336 aaKnown RBP18.56■□□□□ 0.56
HDAC6-204ENST00000376643 TM4SF4P48230 202 aa18.56■□□□□ 0.56
HDAC6-204ENST00000376643 INHBEP58166 350 aa18.56■□□□□ 0.56
HDAC6-204ENST00000376643 CFAP100Q494V2 611 aa18.56■□□□□ 0.56
HDAC6-204ENST00000376643 EPHA10Q5JZY3 1008 aa18.56■□□□□ 0.56
HDAC6-204ENST00000376643 PRAMEF18Q5VWM3 479 aa18.56■□□□□ 0.56
HDAC6-204ENST00000376643 VPS37DQ86XT2 251 aa18.56■□□□□ 0.56
HDAC6-204ENST00000376643 SPDYE2BA6NHP3 402 aa18.55■□□□□ 0.56
HDAC6-204ENST00000376643 SPDYE6P0CI01 402 aa18.55■□□□□ 0.56
HDAC6-204ENST00000376643 RBM5P52756 815 aaKnown RBP eCLIP18.55■□□□□ 0.56
HDAC6-204ENST00000376643 CAVIN4Q5BKX8 364 aa18.55■□□□□ 0.56
HDAC6-204ENST00000376643 ZNF594Q96JF6 807 aaPredicted RBP18.55■□□□□ 0.56
HDAC6-204ENST00000376643 ANGEL1Q9UNK9 670 aaKnown RBP18.55■□□□□ 0.56
HDAC6-204ENST00000376643 F8W031 263 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-204ENST00000376643 MAP3K11Q16584 847 aa18.54■□□□□ 0.56
HDAC6-204ENST00000376643 RABL6Q3YEC7 729 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-204ENST00000376643 MFSD14BQ5SR56 506 aa18.54■□□□□ 0.56
HDAC6-204ENST00000376643 LDLRAD1Q5T700 205 aa18.54■□□□□ 0.56
HDAC6-204ENST00000376643 MOB2Q70IA6 237 aa18.54■□□□□ 0.56
HDAC6-204ENST00000376643 CERS5Q8N5B7 392 aa18.54■□□□□ 0.56
HDAC6-204ENST00000376643 TDRD7Q8NHU6 1098 aaKnown RBP18.54■□□□□ 0.56
HDAC6-204ENST00000376643 TBC1D22AQ8WUA7 517 aa18.54■□□□□ 0.56
HDAC6-204ENST00000376643 SUCLG2Q96I99 432 aa18.54■□□□□ 0.56
HDAC6-204ENST00000376643 SERPINA10Q9UK55 444 aa18.54■□□□□ 0.56
HDAC6-204ENST00000376643 SCAF8Q9UPN6 1271 aaKnown RBP18.54■□□□□ 0.56
HDAC6-204ENST00000376643 MANSC4A6NHS7 340 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-204ENST00000376643 SNAP23O00161 211 aa18.53■□□□□ 0.56
HDAC6-204ENST00000376643 ZBTB48P10074 688 aaPredicted RBP18.53■□□□□ 0.56
HDAC6-204ENST00000376643 IREB2P48200 963 aaKnown RBP18.53■□□□□ 0.56
HDAC6-204ENST00000376643 MRPL50Q8N5N7 158 aaKnown RBP18.53■□□□□ 0.56
HDAC6-204ENST00000376643 SLC10A4Q96EP9 437 aa18.53■□□□□ 0.56
HDAC6-204ENST00000376643 CFHR5Q9BXR6 569 aa18.53■□□□□ 0.56
HDAC6-204ENST00000376643 VEZTQ9HBM0 779 aa18.53■□□□□ 0.56
HDAC6-204ENST00000376643 HDAC5Q9UQL6 1122 aa18.53■□□□□ 0.56
HDAC6-204ENST00000376643 A0A1B0GUL6 1792 aa18.53■□□□□ 0.56
HDAC6-204ENST00000376643 NBPF7P0C2Y1 421 aaPredicted RBP18.52■□□□□ 0.56
HDAC6-204ENST00000376643 PTPN12Q05209 780 aaKnown RBP18.52■□□□□ 0.56
HDAC6-204ENST00000376643 ALDH1L2Q3SY69 923 aa18.52■□□□□ 0.56
HDAC6-204ENST00000376643 FRAT2O75474 233 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-204ENST00000376643 CT47B1P0C2W7 299 aaPredicted RBP18.51■□□□□ 0.55
HDAC6-204ENST00000376643 TNNI2P48788 182 aa18.51■□□□□ 0.55
HDAC6-204ENST00000376643 PRKG1Q13976 671 aa18.51■□□□□ 0.55
HDAC6-204ENST00000376643 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
HDAC6-204ENST00000376643 SPRYD7Q5W111 196 aa18.51■□□□□ 0.55
HDAC6-204ENST00000376643 OTUD7BQ6GQQ9 843 aa18.51■□□□□ 0.55
HDAC6-204ENST00000376643 BICC1Q9H694 974 aaKnown RBP18.51■□□□□ 0.55
HDAC6-204ENST00000376643 TTF2Q9UNY4 1162 aaKnown RBP18.51■□□□□ 0.55
HDAC6-204ENST00000376643 RIPOR2Q9Y4F9 1068 aa18.51■□□□□ 0.55
HDAC6-204ENST00000376643 KIF16BQ96L93 1317 aa18.5■□□□□ 0.55
HDAC6-204ENST00000376643 PRMT6Q96LA8 375 aaPredicted RBP18.5■□□□□ 0.55
HDAC6-204ENST00000376643 ECM29Q5VYK3 1845 aa18.5■□□□□ 0.55
HDAC6-204ENST00000376643 MAST3O60307 1309 aa18.49■□□□□ 0.55
HDAC6-204ENST00000376643 CLRN2A0PK11 232 aa18.49■□□□□ 0.55
HDAC6-204ENST00000376643 PDE8BO95263 885 aa18.49■□□□□ 0.55
HDAC6-204ENST00000376643 IFIT1P09914 478 aaKnown RBP18.49■□□□□ 0.55
HDAC6-204ENST00000376643 GYG1P46976 350 aa18.49■□□□□ 0.55
HDAC6-204ENST00000376643 HDLBPQ00341 1268 aaKnown RBP18.49■□□□□ 0.55
HDAC6-204ENST00000376643 ANKRD13AQ8IZ07 590 aa18.49■□□□□ 0.55
HDAC6-204ENST00000376643 KAZALD1Q96I82 304 aa18.49■□□□□ 0.55
HDAC6-204ENST00000376643 FAM84BQ96KN1 310 aaPredicted RBP18.49■□□□□ 0.55
HDAC6-204ENST00000376643 SUGT1Q9Y2Z0 365 aa18.49■□□□□ 0.55
HDAC6-204ENST00000376643 GPR25O00155 361 aa18.48■□□□□ 0.55
HDAC6-204ENST00000376643 TBC1D8O95759 1140 aa18.48■□□□□ 0.55
HDAC6-204ENST00000376643 RASA3Q14644 834 aa18.48■□□□□ 0.55
HDAC6-204ENST00000376643 SPDYE2Q495Y8 402 aa18.48■□□□□ 0.55
HDAC6-204ENST00000376643 ZNF296Q8WUU4 475 aaPredicted RBP18.48■□□□□ 0.55
HDAC6-204ENST00000376643 HOOK2Q96ED9 719 aa18.48■□□□□ 0.55
HDAC6-204ENST00000376643 JAG2Q9Y219 1238 aa18.48■□□□□ 0.55
HDAC6-204ENST00000376643 FKTNO75072 461 aa18.47■□□□□ 0.55
HDAC6-204ENST00000376643 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
HDAC6-204ENST00000376643 MKRN3Q13064 507 aaKnown RBP18.47■□□□□ 0.55
HDAC6-204ENST00000376643 PUM3Q15397 648 aaKnown RBP18.47■□□□□ 0.55
HDAC6-204ENST00000376643 FBXO33Q7Z6M2 555 aa18.47■□□□□ 0.55
HDAC6-204ENST00000376643 SSH1Q8WYL5 1049 aa18.47■□□□□ 0.55
HDAC6-204ENST00000376643 PUS3Q9BZE2 481 aaKnown RBP18.47■□□□□ 0.55
HDAC6-204ENST00000376643 SMC4Q9NTJ3 1288 aa18.47■□□□□ 0.55
HDAC6-204ENST00000376643 TMOD2Q9NZR1 351 aa18.47■□□□□ 0.55
HDAC6-204ENST00000376643 FBXO3Q9UK99 471 aa18.47■□□□□ 0.55
HDAC6-204ENST00000376643 DZIP1LQ8IYY4 767 aaKnown RBP18.46■□□□□ 0.55
HDAC6-204ENST00000376643 ANKRD44Q8N8A2 993 aa18.46■□□□□ 0.55
HDAC6-204ENST00000376643 TEKT1Q969V4 418 aa18.46■□□□□ 0.55
HDAC6-204ENST00000376643 WNK4Q96J92 1243 aa18.46■□□□□ 0.55
HDAC6-204ENST00000376643 MRIQ9BWK5 157 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms