RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 MAGEB6Q8N7X4 407 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 C8orf58Q8NAV2 365 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 PPP1R14CQ8TAE6 165 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 PAXBP1Q9Y5B6 917 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 PIK3C2GO75747 1445 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 EYA1Q99502 592 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 DCTPP1Q9H773 170 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 RAB11FIP4Q86YS3 637 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 TEX11Q8IYF3 940 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 FAM200AQ8TCP9 573 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 IQCGQ9H095 443 aaKnown RBP12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 SBNO1A3KN83 1393 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 BTG4Q9NY30 223 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 MRVI1Q9Y6F6 885 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 UBE4AQ14139 1066 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 IQUBQ8NA54 791 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 GGA1Q9UJY5 639 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 AFMP43652 599 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 DTHD1Q6ZMT9 781 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 PPP2R5BQ15173 497 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 PUM3Q15397 648 aaKnown RBP12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 TAF12Q16514 161 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 TMEM87BQ96K49 555 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 EYA2O00167 538 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 BACH1O14867 736 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 ADCY5O95622 1261 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 GNG11P61952 73 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 PDE8AO60658 829 aa12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 HIBADHP31937 336 aaKnown RBP12.56□□□□□ -0.4
PHACTR4-202ENST00000373839 SNX21Q969T3 373 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 BCCIPQ9P287 314 aaKnown RBP eCLIP12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 RBM26Q5T8P6 1007 aaKnown RBP12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 CTR9Q6PD62 1173 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 MAATS1Q7Z4T9 603 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 MMRN2Q9H8L6 949 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 F13A1P00488 732 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 PLCD1P51178 756 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 ZNF354CQ86Y25 554 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 CCDC65Q8IXS2 484 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 CABLES1Q8TDN4 633 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 UFL1O94874 794 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 HAUS3Q68CZ6 603 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 FLAD1Q8NFF5 587 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 PARD3Q8TEW0 1356 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 KRT86O43790 486 aa12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 NUP153P49790 1475 aaKnown RBP12.55□□□□□ -0.4
PHACTR4-202ENST00000373839 SLC8A3P57103 927 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 TBC1D22AQ8WUA7 517 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 SRRTQ9BXP5 876 aaKnown RBP12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 KCNG1Q9UIX4 513 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 IVNS1ABPQ9Y6Y0 642 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 NCKAP5LQ9HCH0 1330 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 VAMP4O75379 141 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 SNX16P57768 344 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 CCDC14Q49A88 953 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 CCDC87Q9NVE4 849 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 RTL1A6NKG5 1358 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 HSF2BPO75031 334 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 CEP85Q6P2H3 762 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 NEK11Q8NG66 645 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 CTAGE15A4D2H0 777 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 CTAGE8P0CG41 777 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 TFCP2Q12800 502 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 CTAGE6Q86UF2 777 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 CTAGE4Q8IX94 777 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 INTS4Q96HW7 963 aaKnown RBP12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 METTL22Q9BUU2 404 aaPredicted RBP12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 NSRP1Q9H0G5 558 aaKnown RBP12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 GDPD2Q9HCC8 539 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 TRMT1Q9NXH9 659 aaKnown RBP12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 TRAPPC8Q9Y2L5 1435 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 SMTNP53814 917 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 GRM1Q13255 1194 aa12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 DHX37Q8IY37 1157 aaKnown RBP12.54□□□□□ -0.4
PHACTR4-202ENST00000373839 EDC4Q6P2E9 1401 aaKnown RBP12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 H0YIN7 160 aa12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 RILPL1Q5EBL4 403 aa12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 MRPS9P82933 396 aaKnown RBP12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 KIF5AQ12840 1032 aa12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 ZNF790Q6PG37 636 aa12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 AOX1Q06278 1338 aa12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 DHX58Q96C10 678 aa12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 C16orf45Q96MC5 204 aaPredicted RBP12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 LZTS2Q9BRK4 669 aa12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 EXOC7Q9UPT5 735 aa12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 CREB3L3Q68CJ9 461 aa12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 TTC14Q96N46 770 aa12.53□□□□□ -0.4
PHACTR4-202ENST00000373839 POLR3GO15318 223 aaPredicted RBP12.52□□□□□ -0.4
PHACTR4-202ENST00000373839 BAG6P46379 1132 aa12.52□□□□□ -0.4
PHACTR4-202ENST00000373839 MIGA1Q8NAN2 632 aa12.52□□□□□ -0.4
PHACTR4-202ENST00000373839 CCDC42Q96M95 316 aa12.52□□□□□ -0.4
PHACTR4-202ENST00000373839 PA2G4Q9UQ80 394 aaKnown RBP12.52□□□□□ -0.4
PHACTR4-202ENST00000373839 NOD1Q9Y239 953 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms