RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ZNRF3Q9ULT6 936 aa16.92■□□□□ 0.3
LDB3-204ENST00000372066 WDR33Q9C0J8 1336 aaKnown RBP16.91■□□□□ 0.3
LDB3-204ENST00000372066 TRAK2O60296 914 aa16.91■□□□□ 0.3
LDB3-204ENST00000372066 CYP2E1P05181 493 aaPredicted RBP16.91■□□□□ 0.3
LDB3-204ENST00000372066 PTPN12Q05209 780 aaKnown RBP16.91■□□□□ 0.3
LDB3-204ENST00000372066 FMR1Q06787 632 aaKnown RBP eCLIP16.91■□□□□ 0.3
LDB3-204ENST00000372066 L1TD1Q5T7N2 865 aaKnown RBP16.91■□□□□ 0.3
LDB3-204ENST00000372066 RTFDC1Q9BY42 306 aaPredicted RBP16.91■□□□□ 0.3
LDB3-204ENST00000372066 SNRKQ9NRH2 765 aa16.91■□□□□ 0.3
LDB3-204ENST00000372066 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
LDB3-204ENST00000372066 SH3TC1Q8TE82 1336 aa16.9■□□□□ 0.3
LDB3-204ENST00000372066 MAP4K4O95819 1239 aaPredicted RBP16.9■□□□□ 0.3
LDB3-204ENST00000372066 CXCL9Q07325 125 aa16.9■□□□□ 0.3
LDB3-204ENST00000372066 GPRC5DQ9NZD1 345 aa16.9■□□□□ 0.3
LDB3-204ENST00000372066 PALD1Q9ULE6 856 aa16.9■□□□□ 0.3
LDB3-204ENST00000372066 TRAF5O00463 557 aa16.89■□□□□ 0.3
LDB3-204ENST00000372066 LBX1P52954 281 aa16.89■□□□□ 0.3
LDB3-204ENST00000372066 PAXIP1Q6ZW49 1069 aaPredicted RBP16.89■□□□□ 0.3
LDB3-204ENST00000372066 TMX3Q96JJ7 454 aa16.89■□□□□ 0.3
LDB3-204ENST00000372066 GPR108Q9NPR9 543 aa16.89■□□□□ 0.3
LDB3-204ENST00000372066 ADARB2Q9NS39 739 aaKnown RBP16.89■□□□□ 0.3
LDB3-204ENST00000372066 FOXD4L1Q9NU39 408 aa16.89■□□□□ 0.3
LDB3-204ENST00000372066 MYH3P11055 1940 aa16.89■□□□□ 0.29
LDB3-204ENST00000372066 ATP5J2-PTCD1G3V325 749 aa16.89■□□□□ 0.29
LDB3-204ENST00000372066 MAP2K1Q02750 393 aaPredicted RBP16.89■□□□□ 0.29
LDB3-204ENST00000372066 GRAPQ13588 217 aa16.89■□□□□ 0.29
LDB3-204ENST00000372066 CWC27Q6UX04 472 aaKnown RBP16.89■□□□□ 0.29
LDB3-204ENST00000372066 GRAPLQ8TC17 118 aaPredicted RBP16.89■□□□□ 0.29
LDB3-204ENST00000372066 SIL1Q9H173 461 aa16.89■□□□□ 0.29
LDB3-204ENST00000372066 ATP5JP18859 108 aa16.88■□□□□ 0.29
LDB3-204ENST00000372066 GMPSP49915 693 aaPredicted RBP16.88■□□□□ 0.29
LDB3-204ENST00000372066 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
LDB3-204ENST00000372066 GRM1Q13255 1194 aa16.88■□□□□ 0.29
LDB3-204ENST00000372066 TRIM28Q13263 835 aaKnown RBP16.88■□□□□ 0.29
LDB3-204ENST00000372066 TNNI3KQ59H18 835 aa16.88■□□□□ 0.29
LDB3-204ENST00000372066 CIAPIN1Q6FI81 312 aa16.88■□□□□ 0.29
LDB3-204ENST00000372066 KCNB2Q92953 911 aa16.88■□□□□ 0.29
LDB3-204ENST00000372066 IL25Q9H293 177 aa16.88■□□□□ 0.29
LDB3-204ENST00000372066 FBXO3Q9UK99 471 aa16.88■□□□□ 0.29
LDB3-204ENST00000372066 FPGT-TNNI3KV9GXZ4 949 aa16.88■□□□□ 0.29
LDB3-204ENST00000372066 ADAMTSL1Q8N6G6 1762 aa16.87■□□□□ 0.29
LDB3-204ENST00000372066 RAD17O75943 681 aa16.87■□□□□ 0.29
LDB3-204ENST00000372066 FOXO4P98177 505 aa16.87■□□□□ 0.29
LDB3-204ENST00000372066 TNIP1Q15025 636 aa16.87■□□□□ 0.29
LDB3-204ENST00000372066 CST9Q5W186 159 aa16.87■□□□□ 0.29
LDB3-204ENST00000372066 ISCA1Q9BUE6 129 aa16.87■□□□□ 0.29
LDB3-204ENST00000372066 TM6SF1Q9BZW5 370 aa16.87■□□□□ 0.29
LDB3-204ENST00000372066 CCDC8Q9H0W5 538 aaPredicted RBP16.87■□□□□ 0.29
LDB3-204ENST00000372066 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
LDB3-204ENST00000372066 CCDC171Q6TFL3 1326 aa16.86■□□□□ 0.29
LDB3-204ENST00000372066 ECE1P42892 770 aa16.86■□□□□ 0.29
LDB3-204ENST00000372066 CAPNS2Q96L46 248 aa16.86■□□□□ 0.29
LDB3-204ENST00000372066 CIAO1O76071 339 aa16.85■□□□□ 0.29
LDB3-204ENST00000372066 BAG4O95429 457 aaKnown RBP16.85■□□□□ 0.29
LDB3-204ENST00000372066 CYP4F22Q6NT55 531 aa16.85■□□□□ 0.29
LDB3-204ENST00000372066 LMBR1LQ6UX01 489 aa16.85■□□□□ 0.29
LDB3-204ENST00000372066 TMC4Q7Z404 712 aa16.85■□□□□ 0.29
LDB3-204ENST00000372066 FAM89AQ96GI7 184 aa16.85■□□□□ 0.29
LDB3-204ENST00000372066 GPR101Q96P66 508 aaPredicted RBP16.85■□□□□ 0.29
LDB3-204ENST00000372066 HSPA8P11142 646 aaKnown RBP16.85■□□□□ 0.29
LDB3-204ENST00000372066 IL15P40933 162 aaPredicted RBP16.85■□□□□ 0.29
LDB3-204ENST00000372066 FSD1Q9BTV5 496 aa16.85■□□□□ 0.29
LDB3-204ENST00000372066 MED23Q9ULK4 1368 aa16.84■□□□□ 0.29
LDB3-204ENST00000372066 LTBP1Q14766 1721 aa16.84■□□□□ 0.29
LDB3-204ENST00000372066 TFCP2Q12800 502 aa16.84■□□□□ 0.29
LDB3-204ENST00000372066 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
LDB3-204ENST00000372066 BEGAINQ9BUH8 593 aa16.84■□□□□ 0.29
LDB3-204ENST00000372066 PLA2G12BQ9BX93 195 aa16.84■□□□□ 0.29
LDB3-204ENST00000372066 TLR7Q9NYK1 1049 aaKnown RBP16.84■□□□□ 0.29
LDB3-204ENST00000372066 TLL2Q9Y6L7 1015 aa16.84■□□□□ 0.29
LDB3-204ENST00000372066 CELF2O95319 508 aaKnown RBP16.83■□□□□ 0.28
LDB3-204ENST00000372066 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
LDB3-204ENST00000372066 ZGPATQ8N5A5 531 aaKnown RBP16.83■□□□□ 0.28
LDB3-204ENST00000372066 TTC14Q96N46 770 aa16.83■□□□□ 0.28
LDB3-204ENST00000372066 GLIS2Q9BZE0 524 aaPredicted RBP16.83■□□□□ 0.28
LDB3-204ENST00000372066 BOLA2Q9H3K6 86 aa16.83■□□□□ 0.28
LDB3-204ENST00000372066 CNOT7Q9UIV1 285 aaKnown RBP16.83■□□□□ 0.28
LDB3-204ENST00000372066 DBNLQ9UJU6 430 aaKnown RBP16.83■□□□□ 0.28
LDB3-204ENST00000372066 NSFL1CQ9UNZ2 370 aaKnown RBP16.83■□□□□ 0.28
LDB3-204ENST00000372066 ZNF609O15014 1411 aa16.83■□□□□ 0.28
LDB3-204ENST00000372066 YDJCA8MPS7 323 aa16.82■□□□□ 0.28
LDB3-204ENST00000372066 H7C1D1 291 aa16.82■□□□□ 0.28
LDB3-204ENST00000372066 PCCAP05165 728 aaPredicted RBP16.82■□□□□ 0.28
LDB3-204ENST00000372066 HIRAP54198 1017 aaPredicted RBP16.82■□□□□ 0.28
LDB3-204ENST00000372066 NMIQ13287 307 aaPredicted RBP16.82■□□□□ 0.28
LDB3-204ENST00000372066 SF3B3Q15393 1217 aaKnown RBP16.82■□□□□ 0.28
LDB3-204ENST00000372066 WASHC4Q2M389 1173 aa16.82■□□□□ 0.28
LDB3-204ENST00000372066 RNF20Q5VTR2 975 aa16.82■□□□□ 0.28
LDB3-204ENST00000372066 CELF1Q92879 486 aaKnown RBP16.82■□□□□ 0.28
LDB3-204ENST00000372066 MAP4K1Q92918 833 aa16.82■□□□□ 0.28
LDB3-204ENST00000372066 HMG20BQ9P0W2 317 aa16.82■□□□□ 0.28
LDB3-204ENST00000372066 PGAP2Q9UHJ9 254 aa16.82■□□□□ 0.28
LDB3-204ENST00000372066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.82■□□□□ 0.28
LDB3-204ENST00000372066 CDHR2Q9BYE9 1310 aa16.82■□□□□ 0.28
LDB3-204ENST00000372066 FSD2A1L4K1 749 aa16.81■□□□□ 0.28
LDB3-204ENST00000372066 GOLGA6L3A6NEY3 463 aa16.81■□□□□ 0.28
LDB3-204ENST00000372066 C6orf229H3BNL8 230 aa16.81■□□□□ 0.28
LDB3-204ENST00000372066 RIMBP2O15034 1052 aa16.81■□□□□ 0.28
LDB3-204ENST00000372066 NECTIN1Q15223 517 aa16.81■□□□□ 0.28
LDB3-204ENST00000372066 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms