RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
TSPAN1-201ENST00000372003 RFX5P48382 616 aaPredicted RBP13.59□□□□□ -0.23
TSPAN1-201ENST00000372003 PTPN12Q05209 780 aaKnown RBP13.59□□□□□ -0.23
TSPAN1-201ENST00000372003 MTX1Q13505 466 aa13.59□□□□□ -0.23
TSPAN1-201ENST00000372003 RNF214Q8ND24 703 aa13.59□□□□□ -0.23
TSPAN1-201ENST00000372003 RAB11FIP3O75154 756 aa13.58□□□□□ -0.24
TSPAN1-201ENST00000372003 LRRC24Q50LG9 513 aa13.58□□□□□ -0.24
TSPAN1-201ENST00000372003 CCDC93Q567U6 631 aa13.58□□□□□ -0.24
TSPAN1-201ENST00000372003 TMC4Q7Z404 712 aa13.58□□□□□ -0.24
TSPAN1-201ENST00000372003 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.24
TSPAN1-201ENST00000372003 ANKIB1Q9P2G1 1089 aa13.58□□□□□ -0.24
TSPAN1-201ENST00000372003 MINPP1Q9UNW1 487 aa13.58□□□□□ -0.24
TSPAN1-201ENST00000372003 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.58□□□□□ -0.24
TSPAN1-201ENST00000372003 COL4A1P02462 1669 aa13.58□□□□□ -0.24
TSPAN1-201ENST00000372003 GOLGB1Q14789 3259 aaKnown RBP13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 GPSM2P81274 684 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 SOGA3Q5TF21 947 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 HELBQ8NG08 1087 aaPredicted RBP13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 USP25Q9UHP3 1055 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 PALD1Q9ULE6 856 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 LAMB2P55268 1798 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 APBB1O00213 710 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 GRIN3BO60391 1043 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 KDM4AO75164 1064 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 ZSCAN22P10073 491 aaPredicted RBP13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 CHRNDQ07001 517 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 POLA2Q14181 598 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 CC2D2BQ6DHV5 1058 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 DPP8Q6V1X1 898 aaPredicted RBP13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 MPNDQ8N594 471 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 SSH3Q8TE77 659 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 DIAPH3Q9NSV4 1193 aa13.57□□□□□ -0.24
TSPAN1-201ENST00000372003 EYA2O00167 538 aa13.56□□□□□ -0.24
TSPAN1-201ENST00000372003 TAF5LO75529 589 aa13.56□□□□□ -0.24
TSPAN1-201ENST00000372003 SURF6O75683 361 aaKnown RBP13.56□□□□□ -0.24
TSPAN1-201ENST00000372003 ADCY5O95622 1261 aa13.56□□□□□ -0.24
TSPAN1-201ENST00000372003 RASSF7Q02833 373 aa13.56□□□□□ -0.24
TSPAN1-201ENST00000372003 DNTTIP2Q5QJE6 756 aaKnown RBP13.56□□□□□ -0.24
TSPAN1-201ENST00000372003 RTKN2Q8IZC4 609 aa13.56□□□□□ -0.24
TSPAN1-201ENST00000372003 COPRSQ9NQ92 184 aa13.56□□□□□ -0.24
TSPAN1-201ENST00000372003 RIPOR2Q9Y4F9 1068 aa13.56□□□□□ -0.24
TSPAN1-201ENST00000372003 SLX4Q8IY92 1834 aa13.56□□□□□ -0.24
TSPAN1-201ENST00000372003 RAD50Q92878 1312 aa13.55□□□□□ -0.24
TSPAN1-201ENST00000372003 WTIPA6NIX2 430 aaPredicted RBP13.55□□□□□ -0.24
TSPAN1-201ENST00000372003 GOLGA6L6A8MZA4 724 aa13.55□□□□□ -0.24
TSPAN1-201ENST00000372003 C6orf229H3BNL8 230 aa13.55□□□□□ -0.24
TSPAN1-201ENST00000372003 G3BP1Q13283 466 aaKnown RBP eCLIP13.55□□□□□ -0.24
TSPAN1-201ENST00000372003 METTL24Q5JXM2 366 aa13.55□□□□□ -0.24
TSPAN1-201ENST00000372003 TTC14Q96N46 770 aa13.55□□□□□ -0.24
TSPAN1-201ENST00000372003 FUCA2Q9BTY2 467 aa13.55□□□□□ -0.24
TSPAN1-201ENST00000372003 TCHHQ07283 1943 aa13.55□□□□□ -0.24
TSPAN1-201ENST00000372003 TRIM6-TRIM34B2RNG4 842 aa13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 SNAP23O00161 211 aa13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 NFKBIEO00221 500 aa13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 GADD45BO75293 160 aaPredicted RBP13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 OS9Q13438 667 aaPredicted RBP13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 RILPL2Q969X0 211 aa13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 ZSCAN31Q96LW9 406 aaPredicted RBP13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 GPR101Q96P66 508 aaPredicted RBP13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 GTPBP4Q9BZE4 634 aaKnown RBP13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 ANKRD2Q9GZV1 360 aa13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 TAOK3Q9H2K8 898 aa13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 EXOC6BQ9Y2D4 811 aa13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 KIF3AQ9Y496 699 aa13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 TAF1P21675 1872 aa13.54□□□□□ -0.24
TSPAN1-201ENST00000372003 STX6O43752 255 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 UFL1O94874 794 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 FKBP4Q02790 459 aaKnown RBP eCLIP13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 FOXD4L5Q5VV16 416 aaPredicted RBP13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 ATG9AQ7Z3C6 839 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 FOXD4L4Q8WXT5 416 aaPredicted RBP13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 CHAMP1Q96JM3 812 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 POLLQ9UGP5 575 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 DLEC1Q9Y238 1755 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 XDHP47989 1333 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 MROH5Q6ZUA9 1318 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 RIMBP2O15034 1052 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 SGSM2O43147 1006 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 CIAO1O76071 339 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 F13A1P00488 732 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 KCNJ4P48050 445 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 DMTNQ08495 405 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 CHAF1AQ13111 956 aaPredicted RBP13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 GRIPAP1Q4V328 841 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 TBC1D16Q8TBP0 767 aa13.53□□□□□ -0.24
TSPAN1-201ENST00000372003 ATP2B4P23634 1241 aa13.52□□□□□ -0.25
TSPAN1-201ENST00000372003 IL15P40933 162 aaPredicted RBP13.52□□□□□ -0.25
TSPAN1-201ENST00000372003 SYCP1Q15431 976 aa13.52□□□□□ -0.25
TSPAN1-201ENST00000372003 KIAA1524Q8TCG1 905 aa13.52□□□□□ -0.25
TSPAN1-201ENST00000372003 TM6SF1Q9BZW5 370 aa13.52□□□□□ -0.25
TSPAN1-201ENST00000372003 SH2B1Q9NRF2 756 aaPredicted RBP13.52□□□□□ -0.25
TSPAN1-201ENST00000372003 PODXL2Q9NZ53 605 aa13.52□□□□□ -0.25
TSPAN1-201ENST00000372003 CEP126Q9P2H0 1117 aa13.52□□□□□ -0.25
TSPAN1-201ENST00000372003 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
TSPAN1-201ENST00000372003 MYH3P11055 1940 aa13.52□□□□□ -0.25
TSPAN1-201ENST00000372003 CCDC171Q6TFL3 1326 aa13.51□□□□□ -0.25
TSPAN1-201ENST00000372003 PDE8BO95263 885 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms