RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 MKRN3Q13064 507 aaKnown RBP16.68■□□□□ 0.26
RPF1-201ENST00000370654 CCDC57Q2TAC2 916 aa16.68■□□□□ 0.26
RPF1-201ENST00000370654 SRCIN1Q9C0H9 1055 aa16.68■□□□□ 0.26
RPF1-201ENST00000370654 SAGE1Q9NXZ1 904 aa16.68■□□□□ 0.26
RPF1-201ENST00000370654 PTPN12Q05209 780 aaKnown RBP16.67■□□□□ 0.26
RPF1-201ENST00000370654 TTLL12Q14166 644 aaPredicted RBP16.67■□□□□ 0.26
RPF1-201ENST00000370654 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
RPF1-201ENST00000370654 AKAP11Q9UKA4 1901 aa16.67■□□□□ 0.26
RPF1-201ENST00000370654 GYG1P46976 350 aa16.66■□□□□ 0.26
RPF1-201ENST00000370654 TAF7LQ5H9L4 462 aa16.66■□□□□ 0.26
RPF1-201ENST00000370654 ANKRD44Q8N8A2 993 aa16.66■□□□□ 0.26
RPF1-201ENST00000370654 PRMT6Q96LA8 375 aaPredicted RBP16.66■□□□□ 0.26
RPF1-201ENST00000370654 HDAC9Q9UKV0 1011 aa16.66■□□□□ 0.26
RPF1-201ENST00000370654 UTYO14607 1347 aa16.66■□□□□ 0.26
RPF1-201ENST00000370654 SSC5DA1L4H1 1573 aa16.66■□□□□ 0.26
RPF1-201ENST00000370654 CLRN2A0PK11 232 aa16.65■□□□□ 0.26
RPF1-201ENST00000370654 DLGAP5Q15398 846 aa16.65■□□□□ 0.26
RPF1-201ENST00000370654 CFAP100Q494V2 611 aa16.65■□□□□ 0.26
RPF1-201ENST00000370654 ZNF804AQ7Z570 1209 aa16.65■□□□□ 0.26
RPF1-201ENST00000370654 SSH1Q8WYL5 1049 aa16.65■□□□□ 0.26
RPF1-201ENST00000370654 CDCA7LQ96GN5 454 aa16.65■□□□□ 0.26
RPF1-201ENST00000370654 BICC1Q9H694 974 aaKnown RBP16.65■□□□□ 0.26
RPF1-201ENST00000370654 GRIK5Q16478 980 aa16.64■□□□□ 0.26
RPF1-201ENST00000370654 LRRC24Q50LG9 513 aa16.64■□□□□ 0.26
RPF1-201ENST00000370654 APOBEC3FQ8IUX4 373 aaKnown RBP16.64■□□□□ 0.26
RPF1-201ENST00000370654 MTMR14Q8NCE2 650 aa16.64■□□□□ 0.26
RPF1-201ENST00000370654 KLHDC4Q8TBB5 520 aa16.64■□□□□ 0.26
RPF1-201ENST00000370654 FAM84BQ96KN1 310 aaPredicted RBP16.64■□□□□ 0.26
RPF1-201ENST00000370654 DEFB129Q9H1M3 183 aa16.64■□□□□ 0.26
RPF1-201ENST00000370654 RIPOR2Q9Y4F9 1068 aa16.64■□□□□ 0.26
RPF1-201ENST00000370654 TBC1D8O95759 1140 aa16.64■□□□□ 0.25
RPF1-201ENST00000370654 RABL6Q3YEC7 729 aaPredicted RBP16.64■□□□□ 0.25
RPF1-201ENST00000370654 LDLRAD1Q5T700 205 aa16.64■□□□□ 0.25
RPF1-201ENST00000370654 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.25
RPF1-201ENST00000370654 R3HDMLQ9H3Y0 253 aa16.64■□□□□ 0.25
RPF1-201ENST00000370654 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.64■□□□□ 0.25
RPF1-201ENST00000370654 SPDYE2BA6NHP3 402 aa16.63■□□□□ 0.25
RPF1-201ENST00000370654 SPDYE6P0CI01 402 aa16.63■□□□□ 0.25
RPF1-201ENST00000370654 RGS19P49795 217 aa16.63■□□□□ 0.25
RPF1-201ENST00000370654 MMP14P50281 582 aa16.63■□□□□ 0.25
RPF1-201ENST00000370654 SLFN5Q08AF3 891 aa16.63■□□□□ 0.25
RPF1-201ENST00000370654 CLMNQ96JQ2 1002 aa16.63■□□□□ 0.25
RPF1-201ENST00000370654 ANGEL1Q9UNK9 670 aaKnown RBP16.63■□□□□ 0.25
RPF1-201ENST00000370654 FAM205AQ6ZU69 1335 aa16.62■□□□□ 0.25
RPF1-201ENST00000370654 FKBP1AP62942 108 aaKnown RBP16.62■□□□□ 0.25
RPF1-201ENST00000370654 UBE4AQ14139 1066 aa16.62■□□□□ 0.25
RPF1-201ENST00000370654 USP44Q9H0E7 712 aa16.62■□□□□ 0.25
RPF1-201ENST00000370654 IQSEC3Q9UPP2 1182 aaPredicted RBP16.62■□□□□ 0.25
RPF1-201ENST00000370654 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
RPF1-201ENST00000370654 NF2P35240 595 aa16.61■□□□□ 0.25
RPF1-201ENST00000370654 TM4SF4P48230 202 aa16.61■□□□□ 0.25
RPF1-201ENST00000370654 NBPF12Q5TAG4 269 aaPredicted RBP16.61■□□□□ 0.25
RPF1-201ENST00000370654 ARMC9Q7Z3E5 817 aa16.61■□□□□ 0.25
RPF1-201ENST00000370654 CDAN1Q8IWY9 1227 aa16.61■□□□□ 0.25
RPF1-201ENST00000370654 ECM29Q5VYK3 1845 aa16.6■□□□□ 0.25
RPF1-201ENST00000370654 MFSD14BQ5SR56 506 aa16.6■□□□□ 0.25
RPF1-201ENST00000370654 SPRYD7Q5W111 196 aa16.6■□□□□ 0.25
RPF1-201ENST00000370654 FBXO33Q7Z6M2 555 aa16.6■□□□□ 0.25
RPF1-201ENST00000370654 VGLL2Q8N8G2 317 aa16.6■□□□□ 0.25
RPF1-201ENST00000370654 VEZTQ9HBM0 779 aa16.6■□□□□ 0.25
RPF1-201ENST00000370654 E9PSI1 815 aa16.59■□□□□ 0.25
RPF1-201ENST00000370654 RBM5P52756 815 aaKnown RBP eCLIP16.59■□□□□ 0.25
RPF1-201ENST00000370654 REM2Q8IYK8 340 aaPredicted RBP16.59■□□□□ 0.25
RPF1-201ENST00000370654 ZNF296Q8WUU4 475 aaPredicted RBP16.59■□□□□ 0.25
RPF1-201ENST00000370654 TDRD3Q9H7E2 651 aaKnown RBP16.59■□□□□ 0.25
RPF1-201ENST00000370654 TTF2Q9UNY4 1162 aaKnown RBP16.59■□□□□ 0.25
RPF1-201ENST00000370654 COL1A1P02452 1464 aaPredicted RBP16.58■□□□□ 0.25
RPF1-201ENST00000370654 GJA5P36382 358 aa16.58■□□□□ 0.24
RPF1-201ENST00000370654 RFX5P48382 616 aaPredicted RBP16.58■□□□□ 0.24
RPF1-201ENST00000370654 RASA3Q14644 834 aa16.58■□□□□ 0.24
RPF1-201ENST00000370654 MAP3K11Q16584 847 aa16.58■□□□□ 0.24
RPF1-201ENST00000370654 ZNF70Q9UC06 446 aaPredicted RBP16.58■□□□□ 0.24
RPF1-201ENST00000370654 PTPRCP08575 1304 aa16.58■□□□□ 0.24
RPF1-201ENST00000370654 MROH5Q6ZUA9 1318 aa16.58■□□□□ 0.24
RPF1-201ENST00000370654 USP2O75604 605 aaPredicted RBP16.57■□□□□ 0.24
RPF1-201ENST00000370654 BCAMP50895 628 aa16.57■□□□□ 0.24
RPF1-201ENST00000370654 SOX10P56693 466 aa16.57■□□□□ 0.24
RPF1-201ENST00000370654 MLLT1Q03111 559 aaPredicted RBP16.57■□□□□ 0.24
RPF1-201ENST00000370654 SPDYE2Q495Y8 402 aa16.57■□□□□ 0.24
RPF1-201ENST00000370654 METTL24Q5JXM2 366 aa16.57■□□□□ 0.24
RPF1-201ENST00000370654 CTU1Q7Z7A3 348 aaKnown RBP16.57■□□□□ 0.24
RPF1-201ENST00000370654 TRMT2AQ8IZ69 625 aaKnown RBP16.57■□□□□ 0.24
RPF1-201ENST00000370654 GPR25O00155 361 aa16.56■□□□□ 0.24
RPF1-201ENST00000370654 CHAF1AQ13111 956 aaPredicted RBP16.56■□□□□ 0.24
RPF1-201ENST00000370654 DZIP1LQ8IYY4 767 aaKnown RBP16.56■□□□□ 0.24
RPF1-201ENST00000370654 SLC10A4Q96EP9 437 aa16.56■□□□□ 0.24
RPF1-201ENST00000370654 WNK4Q96J92 1243 aa16.56■□□□□ 0.24
RPF1-201ENST00000370654 MYO1BO43795 1136 aa16.55■□□□□ 0.24
RPF1-201ENST00000370654 PDE8BO95263 885 aa16.55■□□□□ 0.24
RPF1-201ENST00000370654 CRKP46108 304 aa16.55■□□□□ 0.24
RPF1-201ENST00000370654 ARAP2Q8WZ64 1704 aa16.55■□□□□ 0.24
RPF1-201ENST00000370654 TEPSINQ96N21 525 aa16.55■□□□□ 0.24
RPF1-201ENST00000370654 PPP2R3BQ9Y5P8 575 aa16.55■□□□□ 0.24
RPF1-201ENST00000370654 TCP10L2B9ZVM9 353 aa16.54■□□□□ 0.24
RPF1-201ENST00000370654 IGF2BP3O00425 579 aaKnown RBP eCLIP16.54■□□□□ 0.24
RPF1-201ENST00000370654 FGFR2P21802 821 aa16.54■□□□□ 0.24
RPF1-201ENST00000370654 CACNB3P54284 484 aa16.54■□□□□ 0.24
RPF1-201ENST00000370654 SERPINA10Q9UK55 444 aa16.54■□□□□ 0.24
RPF1-201ENST00000370654 OTOFQ9HC10 1997 aa16.53■□□□□ 0.24
RPF1-201ENST00000370654 PPP1R12BO60237 982 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms