RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ECM29Q5VYK3 1845 aa20.3■□□□□ 0.84
VMA21-202ENST00000370361 NBPF7P0C2Y1 421 aaPredicted RBP20.3■□□□□ 0.84
VMA21-202ENST00000370361 ARMC9Q7Z3E5 817 aa20.3■□□□□ 0.84
VMA21-202ENST00000370361 UNCXA6NJT0 531 aa20.29■□□□□ 0.84
VMA21-202ENST00000370361 CCER2I3L3R5 266 aa20.29■□□□□ 0.84
VMA21-202ENST00000370361 SSH1Q8WYL5 1049 aa20.29■□□□□ 0.84
VMA21-202ENST00000370361 KAZALD1Q96I82 304 aa20.29■□□□□ 0.84
VMA21-202ENST00000370361 ZNF594Q96JF6 807 aaPredicted RBP20.29■□□□□ 0.84
VMA21-202ENST00000370361 HDAC5Q9UQL6 1122 aa20.29■□□□□ 0.84
VMA21-202ENST00000370361 HIBADHP31937 336 aaKnown RBP20.28■□□□□ 0.84
VMA21-202ENST00000370361 TTLL12Q14166 644 aaPredicted RBP20.28■□□□□ 0.84
VMA21-202ENST00000370361 TDRD7Q8NHU6 1098 aaKnown RBP20.28■□□□□ 0.84
VMA21-202ENST00000370361 ZIC5Q96T25 663 aa20.28■□□□□ 0.84
VMA21-202ENST00000370361 BICC1Q9H694 974 aaKnown RBP20.28■□□□□ 0.84
VMA21-202ENST00000370361 TSKSQ9UJT2 592 aa20.28■□□□□ 0.84
VMA21-202ENST00000370361 RIPOR2Q9Y4F9 1068 aa20.28■□□□□ 0.84
VMA21-202ENST00000370361 PLIN1O60240 522 aa20.27■□□□□ 0.84
VMA21-202ENST00000370361 CERS5Q8N5B7 392 aa20.27■□□□□ 0.84
VMA21-202ENST00000370361 CSRNP1Q96S65 589 aa20.27■□□□□ 0.84
VMA21-202ENST00000370361 RNF186Q9NXI6 227 aa20.27■□□□□ 0.84
VMA21-202ENST00000370361 KIF16BQ96L93 1317 aa20.27■□□□□ 0.83
VMA21-202ENST00000370361 SPDYE2BA6NHP3 402 aa20.26■□□□□ 0.83
VMA21-202ENST00000370361 SNAP23O00161 211 aa20.26■□□□□ 0.83
VMA21-202ENST00000370361 SPDYE6P0CI01 402 aa20.26■□□□□ 0.83
VMA21-202ENST00000370361 TNFAIP1Q13829 316 aa20.26■□□□□ 0.83
VMA21-202ENST00000370361 VPS37DQ86XT2 251 aa20.26■□□□□ 0.83
VMA21-202ENST00000370361 TRMT2AQ8IZ69 625 aaKnown RBP20.26■□□□□ 0.83
VMA21-202ENST00000370361 DEFB129Q9H1M3 183 aa20.26■□□□□ 0.83
VMA21-202ENST00000370361 SERPINA10Q9UK55 444 aa20.26■□□□□ 0.83
VMA21-202ENST00000370361 ARAP2Q8WZ64 1704 aa20.26■□□□□ 0.83
VMA21-202ENST00000370361 SREBF2Q12772 1141 aa20.25■□□□□ 0.83
VMA21-202ENST00000370361 SUPT20HL1Q3ZLR7 823 aa20.25■□□□□ 0.83
VMA21-202ENST00000370361 CFAP100Q494V2 611 aa20.25■□□□□ 0.83
VMA21-202ENST00000370361 CAVIN4Q5BKX8 364 aa20.25■□□□□ 0.83
VMA21-202ENST00000370361 TBC1D22AQ8WUA7 517 aa20.25■□□□□ 0.83
VMA21-202ENST00000370361 SMC4Q9NTJ3 1288 aa20.25■□□□□ 0.83
VMA21-202ENST00000370361 CASP8AP2Q9UKL3 1982 aa20.25■□□□□ 0.83
VMA21-202ENST00000370361 PPP1R12BO60237 982 aaPredicted RBP20.24■□□□□ 0.83
VMA21-202ENST00000370361 TRPA1O75762 1119 aa20.24■□□□□ 0.83
VMA21-202ENST00000370361 MAP3K11Q16584 847 aa20.24■□□□□ 0.83
VMA21-202ENST00000370361 METTL24Q5JXM2 366 aa20.24■□□□□ 0.83
VMA21-202ENST00000370361 MFSD14BQ5SR56 506 aa20.24■□□□□ 0.83
VMA21-202ENST00000370361 ANKRD44Q8N8A2 993 aa20.24■□□□□ 0.83
VMA21-202ENST00000370361 FAM84BQ96KN1 310 aaPredicted RBP20.24■□□□□ 0.83
VMA21-202ENST00000370361 USP44Q9H0E7 712 aa20.24■□□□□ 0.83
VMA21-202ENST00000370361 FBXO3Q9UK99 471 aa20.24■□□□□ 0.83
VMA21-202ENST00000370361 UBE2Q2LH0YL09 131 aa20.23■□□□□ 0.83
VMA21-202ENST00000370361 PDE8BO95263 885 aa20.23■□□□□ 0.83
VMA21-202ENST00000370361 NOM1Q5C9Z4 860 aaKnown RBP20.23■□□□□ 0.83
VMA21-202ENST00000370361 LDLRAD1Q5T700 205 aa20.23■□□□□ 0.83
VMA21-202ENST00000370361 TM4SF4P48230 202 aa20.22■□□□□ 0.83
VMA21-202ENST00000370361 HDLBPQ00341 1268 aaKnown RBP20.22■□□□□ 0.83
VMA21-202ENST00000370361 PRAMEF18Q5VWM3 479 aa20.22■□□□□ 0.83
VMA21-202ENST00000370361 FBXO33Q7Z6M2 555 aa20.22■□□□□ 0.83
VMA21-202ENST00000370361 PUS3Q9BZE2 481 aaKnown RBP20.22■□□□□ 0.83
VMA21-202ENST00000370361 API5Q9BZZ5 524 aaKnown RBP20.22■□□□□ 0.83
VMA21-202ENST00000370361 MCOLN1Q9GZU1 580 aa20.22■□□□□ 0.83
VMA21-202ENST00000370361 SUGT1Q9Y2Z0 365 aa20.22■□□□□ 0.83
VMA21-202ENST00000370361 F8W031 263 aaPredicted RBP20.21■□□□□ 0.83
VMA21-202ENST00000370361 IFIT1P09914 478 aaKnown RBP20.21■□□□□ 0.83
VMA21-202ENST00000370361 GYG1P46976 350 aa20.21■□□□□ 0.83
VMA21-202ENST00000370361 RBM5P52756 815 aaKnown RBP eCLIP20.21■□□□□ 0.83
VMA21-202ENST00000370361 INHBEP58166 350 aa20.21■□□□□ 0.83
VMA21-202ENST00000370361 DGKZQ13574 1117 aa20.21■□□□□ 0.83
VMA21-202ENST00000370361 PUM3Q15397 648 aaKnown RBP20.21■□□□□ 0.83
VMA21-202ENST00000370361 VGLL2Q8N8G2 317 aa20.21■□□□□ 0.83
VMA21-202ENST00000370361 TTF2Q9UNY4 1162 aaKnown RBP20.21■□□□□ 0.83
VMA21-202ENST00000370361 SCAF8Q9UPN6 1271 aaKnown RBP20.21■□□□□ 0.83
VMA21-202ENST00000370361 ALDH1A1P00352 501 aa20.2■□□□□ 0.82
VMA21-202ENST00000370361 ZBTB48P10074 688 aaPredicted RBP20.2■□□□□ 0.82
VMA21-202ENST00000370361 MOB2Q70IA6 237 aa20.2■□□□□ 0.82
VMA21-202ENST00000370361 PRMT6Q96LA8 375 aaPredicted RBP20.2■□□□□ 0.82
VMA21-202ENST00000370361 MRIQ9BWK5 157 aa20.2■□□□□ 0.82
VMA21-202ENST00000370361 CFHR5Q9BXR6 569 aa20.2■□□□□ 0.82
VMA21-202ENST00000370361 ANGEL1Q9UNK9 670 aaKnown RBP20.2■□□□□ 0.82
VMA21-202ENST00000370361 MAST3O60307 1309 aa20.2■□□□□ 0.82
VMA21-202ENST00000370361 FRAT2O75474 233 aaPredicted RBP20.19■□□□□ 0.82
VMA21-202ENST00000370361 PTPN12Q05209 780 aaKnown RBP20.19■□□□□ 0.82
VMA21-202ENST00000370361 SPDYE2Q495Y8 402 aa20.19■□□□□ 0.82
VMA21-202ENST00000370361 LRRC24Q50LG9 513 aa20.19■□□□□ 0.82
VMA21-202ENST00000370361 VEZTQ9HBM0 779 aa20.19■□□□□ 0.82
VMA21-202ENST00000370361 MANSC4A6NHS7 340 aaPredicted RBP20.18■□□□□ 0.82
VMA21-202ENST00000370361 CCDC85CA6NKD9 419 aa20.18■□□□□ 0.82
VMA21-202ENST00000370361 UBTFL1P0CB47 393 aaPredicted RBP20.18■□□□□ 0.82
VMA21-202ENST00000370361 IREB2P48200 963 aaKnown RBP20.18■□□□□ 0.82
VMA21-202ENST00000370361 TNNI2P48788 182 aa20.18■□□□□ 0.82
VMA21-202ENST00000370361 PKN2Q16513 984 aaKnown RBP20.18■□□□□ 0.82
VMA21-202ENST00000370361 ARHGAP45Q92619 1136 aa20.18■□□□□ 0.82
VMA21-202ENST00000370361 CDCA7LQ96GN5 454 aa20.18■□□□□ 0.82
VMA21-202ENST00000370361 EYA2O00167 538 aa20.17■□□□□ 0.82
VMA21-202ENST00000370361 SPRYD7Q5W111 196 aa20.17■□□□□ 0.82
VMA21-202ENST00000370361 CTU1Q7Z7A3 348 aaKnown RBP20.17■□□□□ 0.82
VMA21-202ENST00000370361 LPIN2Q92539 896 aa20.17■□□□□ 0.82
VMA21-202ENST00000370361 SLC10A4Q96EP9 437 aa20.17■□□□□ 0.82
VMA21-202ENST00000370361 LAMB1P07942 1786 aa20.16■□□□□ 0.82
VMA21-202ENST00000370361 CLRN2A0PK11 232 aa20.16■□□□□ 0.82
VMA21-202ENST00000370361 CIAO1O76071 339 aa20.16■□□□□ 0.82
VMA21-202ENST00000370361 SLC5A1P13866 664 aa20.16■□□□□ 0.82
VMA21-202ENST00000370361 FGFR2P21802 821 aa20.16■□□□□ 0.82
VMA21-202ENST00000370361 RGS19P49795 217 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms