RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 DACT2Q5SW24 774 aa16.9■□□□□ 0.3
SSR4-202ENST00000370085 DCTPP1Q9H773 170 aa16.9■□□□□ 0.3
SSR4-202ENST00000370085 GPRC5DQ9NZD1 345 aa16.9■□□□□ 0.3
SSR4-202ENST00000370085 HDAC9Q9UKV0 1011 aa16.9■□□□□ 0.3
SSR4-202ENST00000370085 DENND2AQ9ULE3 1009 aa16.9■□□□□ 0.3
SSR4-202ENST00000370085 FAM205AQ6ZU69 1335 aa16.9■□□□□ 0.3
SSR4-202ENST00000370085 IFIT2P09913 472 aaKnown RBP16.89■□□□□ 0.29
SSR4-202ENST00000370085 UQCRFS1P1P0C7P4 283 aa16.89■□□□□ 0.29
SSR4-202ENST00000370085 EPHX2P34913 555 aa16.89■□□□□ 0.29
SSR4-202ENST00000370085 SCNN1DP51172 638 aa16.89■□□□□ 0.29
SSR4-202ENST00000370085 CCDC102BQ68D86 513 aa16.89■□□□□ 0.29
SSR4-202ENST00000370085 AACSQ86V21 672 aa16.89■□□□□ 0.29
SSR4-202ENST00000370085 WDR66Q8TBY9 1149 aa16.89■□□□□ 0.29
SSR4-202ENST00000370085 GCC1Q96CN9 775 aa16.89■□□□□ 0.29
SSR4-202ENST00000370085 ADARB2Q9NS39 739 aaKnown RBP16.89■□□□□ 0.29
SSR4-202ENST00000370085 CNOT7Q9UIV1 285 aaKnown RBP16.89■□□□□ 0.29
SSR4-202ENST00000370085 ZBTB12Q9Y330 459 aaPredicted RBP16.89■□□□□ 0.29
SSR4-202ENST00000370085 ZBTB22O15209 634 aa16.88■□□□□ 0.29
SSR4-202ENST00000370085 USP17L8P0C7I0 530 aa16.88■□□□□ 0.29
SSR4-202ENST00000370085 ADORA1P30542 326 aa16.88■□□□□ 0.29
SSR4-202ENST00000370085 CHAF1AQ13111 956 aaPredicted RBP16.88■□□□□ 0.29
SSR4-202ENST00000370085 MFSD14BQ5SR56 506 aa16.88■□□□□ 0.29
SSR4-202ENST00000370085 TTC39AQ5SRH9 613 aa16.88■□□□□ 0.29
SSR4-202ENST00000370085 USP50Q70EL3 339 aaPredicted RBP16.88■□□□□ 0.29
SSR4-202ENST00000370085 MICALL2Q8IY33 904 aa16.88■□□□□ 0.29
SSR4-202ENST00000370085 ZGPATQ8N5A5 531 aaKnown RBP16.88■□□□□ 0.29
SSR4-202ENST00000370085 TAF1DQ9H5J8 278 aaPredicted RBP16.88■□□□□ 0.29
SSR4-202ENST00000370085 IQSEC3Q9UPP2 1182 aaPredicted RBP16.88■□□□□ 0.29
SSR4-202ENST00000370085 PHKA1P46020 1223 aa16.87■□□□□ 0.29
SSR4-202ENST00000370085 EAPPQ56P03 285 aaPredicted RBP16.87■□□□□ 0.29
SSR4-202ENST00000370085 IL1RAPL2Q9NP60 686 aa16.87■□□□□ 0.29
SSR4-202ENST00000370085 SUGT1Q9Y2Z0 365 aa16.87■□□□□ 0.29
SSR4-202ENST00000370085 TOMM70O94826 608 aa16.86■□□□□ 0.29
SSR4-202ENST00000370085 EPS15P42566 896 aa16.86■□□□□ 0.29
SSR4-202ENST00000370085 EAF2Q96CJ1 260 aaPredicted RBP16.86■□□□□ 0.29
SSR4-202ENST00000370085 GPATCH3Q96I76 525 aa16.86■□□□□ 0.29
SSR4-202ENST00000370085 BCL11AQ9H165 835 aa16.86■□□□□ 0.29
SSR4-202ENST00000370085 MAST3O60307 1309 aa16.86■□□□□ 0.29
SSR4-202ENST00000370085 PDS5AQ29RF7 1337 aaKnown RBP16.86■□□□□ 0.29
SSR4-202ENST00000370085 POTECB2RU33 542 aa16.85■□□□□ 0.29
SSR4-202ENST00000370085 KIF3CO14782 793 aa16.85■□□□□ 0.29
SSR4-202ENST00000370085 GMLQ99445 158 aa16.85■□□□□ 0.29
SSR4-202ENST00000370085 DBNDD2Q9BQY9 259 aa16.85■□□□□ 0.29
SSR4-202ENST00000370085 CCDC8Q9H0W5 538 aaPredicted RBP16.85■□□□□ 0.29
SSR4-202ENST00000370085 CLEC11AQ9Y240 323 aa16.85■□□□□ 0.29
SSR4-202ENST00000370085 ARID4AP29374 1257 aaPredicted RBP16.84■□□□□ 0.29
SSR4-202ENST00000370085 ZNF280AP59817 542 aaPredicted RBP16.84■□□□□ 0.29
SSR4-202ENST00000370085 SPTY2D1Q68D10 685 aaPredicted RBP16.84■□□□□ 0.29
SSR4-202ENST00000370085 LDHDQ86WU2 507 aa16.84■□□□□ 0.29
SSR4-202ENST00000370085 KIAA0825Q8IV33 1275 aa16.84■□□□□ 0.29
SSR4-202ENST00000370085 RBM46Q8TBY0 533 aaKnown RBP16.84■□□□□ 0.29
SSR4-202ENST00000370085 ZNF512BQ96KM6 892 aaPredicted RBP16.84■□□□□ 0.29
SSR4-202ENST00000370085 DBNLQ9UJU6 430 aaKnown RBP16.84■□□□□ 0.29
SSR4-202ENST00000370085 JAG2Q9Y219 1238 aa16.84■□□□□ 0.29
SSR4-202ENST00000370085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.84■□□□□ 0.29
SSR4-202ENST00000370085 RASGRF1Q13972 1273 aa16.83■□□□□ 0.28
SSR4-202ENST00000370085 KIF4BQ2VIQ3 1234 aa16.83■□□□□ 0.28
SSR4-202ENST00000370085 SPATA5Q8NB90 893 aa16.83■□□□□ 0.28
SSR4-202ENST00000370085 SMC1BQ8NDV3 1235 aa16.83■□□□□ 0.28
SSR4-202ENST00000370085 MXD3Q9BW11 206 aa16.83■□□□□ 0.28
SSR4-202ENST00000370085 MYOZ2Q9NPC6 264 aa16.83■□□□□ 0.28
SSR4-202ENST00000370085 SALL1Q9NSC2 1324 aa16.82■□□□□ 0.28
SSR4-202ENST00000370085 LDHBP07195 334 aaKnown RBP16.82■□□□□ 0.28
SSR4-202ENST00000370085 ZC3H15Q8WU90 426 aaKnown RBP16.82■□□□□ 0.28
SSR4-202ENST00000370085 TTF2Q9UNY4 1162 aaKnown RBP16.82■□□□□ 0.28
SSR4-202ENST00000370085 ZNF646O15015 1829 aaPredicted RBP16.82■□□□□ 0.28
SSR4-202ENST00000370085 F8W031 263 aaPredicted RBP16.81■□□□□ 0.28
SSR4-202ENST00000370085 MYO1BO43795 1136 aa16.81■□□□□ 0.28
SSR4-202ENST00000370085 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
SSR4-202ENST00000370085 FSTL1Q12841 308 aa16.81■□□□□ 0.28
SSR4-202ENST00000370085 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
SSR4-202ENST00000370085 TBC1D10BQ4KMP7 808 aaPredicted RBP16.81■□□□□ 0.28
SSR4-202ENST00000370085 RBM26Q5T8P6 1007 aaKnown RBP16.81■□□□□ 0.28
SSR4-202ENST00000370085 ANKRD45Q5TZF3 282 aa16.81■□□□□ 0.28
SSR4-202ENST00000370085 CHADLQ6NUI6 762 aa16.81■□□□□ 0.28
SSR4-202ENST00000370085 SLF2Q8IX21 1173 aa16.81■□□□□ 0.28
SSR4-202ENST00000370085 CERS5Q8N5B7 392 aa16.81■□□□□ 0.28
SSR4-202ENST00000370085 ABCF2Q9UG63 623 aa16.81■□□□□ 0.28
SSR4-202ENST00000370085 SERPINA10Q9UK55 444 aa16.81■□□□□ 0.28
SSR4-202ENST00000370085 SMARCA5O60264 1052 aaPredicted RBP16.8■□□□□ 0.28
SSR4-202ENST00000370085 IGSF3O75054 1194 aa16.8■□□□□ 0.28
SSR4-202ENST00000370085 HDLBPQ00341 1268 aaKnown RBP16.8■□□□□ 0.28
SSR4-202ENST00000370085 SAMD7Q7Z3H4 446 aa16.8■□□□□ 0.28
SSR4-202ENST00000370085 TLR7Q9NYK1 1049 aaKnown RBP16.8■□□□□ 0.28
SSR4-202ENST00000370085 HMG20BQ9P0W2 317 aa16.8■□□□□ 0.28
SSR4-202ENST00000370085 MCAMP43121 646 aa16.79■□□□□ 0.28
SSR4-202ENST00000370085 ERICH6Q7L0X2 663 aa16.79■□□□□ 0.28
SSR4-202ENST00000370085 DZIP1Q86YF9 867 aaKnown RBP16.79■□□□□ 0.28
SSR4-202ENST00000370085 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSR4-202ENST00000370085 TEKT1Q969V4 418 aa16.79■□□□□ 0.28
SSR4-202ENST00000370085 DCPSQ96C86 337 aaKnown RBP16.79■□□□□ 0.28
SSR4-202ENST00000370085 MRIQ9BWK5 157 aa16.79■□□□□ 0.28
SSR4-202ENST00000370085 TTF1Q15361 905 aaPredicted RBP16.78■□□□□ 0.28
SSR4-202ENST00000370085 SMC5Q8IY18 1101 aa16.78■□□□□ 0.28
SSR4-202ENST00000370085 MTMR14Q8NCE2 650 aa16.78■□□□□ 0.28
SSR4-202ENST00000370085 TRPM4Q8TD43 1214 aa16.78■□□□□ 0.28
SSR4-202ENST00000370085 LRP2BPQ9P2M1 347 aa16.78■□□□□ 0.28
SSR4-202ENST00000370085 COL1A1P02452 1464 aaPredicted RBP16.78■□□□□ 0.28
SSR4-202ENST00000370085 SHTN1A0MZ66 631 aa16.77■□□□□ 0.28
SSR4-202ENST00000370085 ERC2O15083 957 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms