RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ATP2B4P23634 1241 aa23.32■■□□□ 1.32
CHTOP-204ENST00000368694 ADD2P35612 726 aa23.32■■□□□ 1.32
CHTOP-204ENST00000368694 MAP3K12Q12852 859 aa23.32■■□□□ 1.32
CHTOP-204ENST00000368694 SP8Q8IXZ3 490 aa23.32■■□□□ 1.32
CHTOP-204ENST00000368694 GPR101Q96P66 508 aaPredicted RBP23.32■■□□□ 1.32
CHTOP-204ENST00000368694 WWC3Q9ULE0 1092 aa23.32■■□□□ 1.32
CHTOP-204ENST00000368694 ATP6V0A2Q9Y487 856 aa23.32■■□□□ 1.32
CHTOP-204ENST00000368694 SEMA3EO15041 775 aa23.31■■□□□ 1.32
CHTOP-204ENST00000368694 LRP2BPQ9P2M1 347 aa23.31■■□□□ 1.32
CHTOP-204ENST00000368694 ABCF2Q9UG63 623 aa23.31■■□□□ 1.32
CHTOP-204ENST00000368694 IRS2Q9Y4H2 1338 aa23.31■■□□□ 1.32
CHTOP-204ENST00000368694 LTBP1Q14766 1721 aa23.31■■□□□ 1.32
CHTOP-204ENST00000368694 PDE6AP16499 860 aa23.31■■□□□ 1.32
CHTOP-204ENST00000368694 SNX21Q969T3 373 aa23.31■■□□□ 1.32
CHTOP-204ENST00000368694 TMX4Q9H1E5 349 aaPredicted RBP23.31■■□□□ 1.32
CHTOP-204ENST00000368694 PODXL2Q9NZ53 605 aa23.31■■□□□ 1.32
CHTOP-204ENST00000368694 SNX14Q9Y5W7 946 aa23.31■■□□□ 1.32
CHTOP-204ENST00000368694 ZNF532Q9HCE3 1301 aa23.3■■□□□ 1.32
CHTOP-204ENST00000368694 NECTIN1Q15223 517 aa23.3■■□□□ 1.32
CHTOP-204ENST00000368694 PUS7LQ9H0K6 701 aaKnown RBP23.3■■□□□ 1.32
CHTOP-204ENST00000368694 C6orf229H3BNL8 230 aa23.29■■□□□ 1.32
CHTOP-204ENST00000368694 CHRNA5P30532 468 aa23.29■■□□□ 1.32
CHTOP-204ENST00000368694 NBR1Q14596 966 aa23.29■■□□□ 1.32
CHTOP-204ENST00000368694 UBE3CQ15386 1083 aa23.29■■□□□ 1.32
CHTOP-204ENST00000368694 ZNF804AQ7Z570 1209 aa23.29■■□□□ 1.32
CHTOP-204ENST00000368694 MAGEB6Q8N7X4 407 aa23.29■■□□□ 1.32
CHTOP-204ENST00000368694 ST18O60284 1047 aa23.29■■□□□ 1.32
CHTOP-204ENST00000368694 ZKSCAN1P17029 563 aaPredicted RBP23.29■■□□□ 1.32
CHTOP-204ENST00000368694 STYK1Q6J9G0 422 aa23.29■■□□□ 1.32
CHTOP-204ENST00000368694 RASEFQ8IZ41 740 aa23.29■■□□□ 1.32
CHTOP-204ENST00000368694 CD2BP2O95400 341 aaKnown RBP23.28■■□□□ 1.32
CHTOP-204ENST00000368694 CHAF1AQ13111 956 aaPredicted RBP23.28■■□□□ 1.32
CHTOP-204ENST00000368694 VPS53Q5VIR6 699 aa23.28■■□□□ 1.32
CHTOP-204ENST00000368694 RNF20Q5VTR2 975 aa23.28■■□□□ 1.32
CHTOP-204ENST00000368694 CREB3L3Q68CJ9 461 aa23.28■■□□□ 1.32
CHTOP-204ENST00000368694 TBC1D16Q8TBP0 767 aa23.28■■□□□ 1.32
CHTOP-204ENST00000368694 UPF1Q92900 1129 aaKnown RBP eCLIP23.28■■□□□ 1.323e-7■□□□□ 9.9
CHTOP-204ENST00000368694 POLLQ9UGP5 575 aa23.28■■□□□ 1.32
CHTOP-204ENST00000368694 ZBTB7AO95365 584 aa23.28■■□□□ 1.32
CHTOP-204ENST00000368694 NEK4P51957 841 aa23.28■■□□□ 1.32
CHTOP-204ENST00000368694 OLFM4Q6UX06 510 aa23.27■■□□□ 1.32
CHTOP-204ENST00000368694 C15orf52Q6ZUT6 534 aaKnown RBP23.27■■□□□ 1.32
CHTOP-204ENST00000368694 IL17RAQ96F46 866 aa23.27■■□□□ 1.32
CHTOP-204ENST00000368694 RAI14Q9P0K7 980 aa23.27■■□□□ 1.32
CHTOP-204ENST00000368694 U3KPZ7 1027 aaPredicted RBP23.27■■□□□ 1.32
CHTOP-204ENST00000368694 C10orf71Q711Q0 1435 aa23.27■■□□□ 1.32
CHTOP-204ENST00000368694 TCRBV5S4A2TA0A5A2 114 aa23.26■■□□□ 1.31
CHTOP-204ENST00000368694 SLC27A2O14975 620 aa23.26■■□□□ 1.31
CHTOP-204ENST00000368694 GPAA1O43292 621 aa23.26■■□□□ 1.31
CHTOP-204ENST00000368694 HSPD1P10809 573 aaKnown RBP23.26■■□□□ 1.31
CHTOP-204ENST00000368694 DSCC1Q9BVC3 393 aa23.26■■□□□ 1.31
CHTOP-204ENST00000368694 SLX4Q8IY92 1834 aa23.26■■□□□ 1.31
CHTOP-204ENST00000368694 PDS5AQ29RF7 1337 aaKnown RBP23.26■■□□□ 1.31
CHTOP-204ENST00000368694 MPNDQ8N594 471 aa23.26■■□□□ 1.31
CHTOP-204ENST00000368694 UPF3BQ9BZI7 483 aaKnown RBP23.26■■□□□ 1.31
CHTOP-204ENST00000368694 DPP8Q6V1X1 898 aaPredicted RBP23.25■■□□□ 1.31
CHTOP-204ENST00000368694 CNKSR1Q969H4 720 aa23.25■■□□□ 1.31
CHTOP-204ENST00000368694 R3HDM1Q15032 1099 aaKnown RBP23.24■■□□□ 1.31
CHTOP-204ENST00000368694 AIDAQ96BJ3 306 aa23.24■■□□□ 1.31
CHTOP-204ENST00000368694 JAG2Q9Y219 1238 aa23.24■■□□□ 1.31
CHTOP-204ENST00000368694 CCDC88AQ3V6T2 1871 aa23.24■■□□□ 1.31
CHTOP-204ENST00000368694 KCNB2Q92953 911 aa23.24■■□□□ 1.31
CHTOP-204ENST00000368694 DLEC1Q9Y238 1755 aa23.24■■□□□ 1.31
CHTOP-204ENST00000368694 DUOX1Q9NRD9 1551 aa23.23■■□□□ 1.31
CHTOP-204ENST00000368694 K7ELQ4 463 aaPredicted RBP23.23■■□□□ 1.31
CHTOP-204ENST00000368694 CASTP20810 708 aaKnown RBP23.23■■□□□ 1.31
CHTOP-204ENST00000368694 SPRYD3Q8NCJ5 442 aa23.23■■□□□ 1.31
CHTOP-204ENST00000368694 TDRD7Q8NHU6 1098 aaKnown RBP23.23■■□□□ 1.31
CHTOP-204ENST00000368694 JAKMIP1Q96N16 626 aaKnown RBP23.23■■□□□ 1.31
CHTOP-204ENST00000368694 ZNF219Q9P2Y4 722 aaPredicted RBP23.23■■□□□ 1.31
CHTOP-204ENST00000368694 ATF5Q9Y2D1 282 aaPredicted RBP23.23■■□□□ 1.31
CHTOP-204ENST00000368694 CD209Q9NNX6 404 aa23.22■■□□□ 1.31
CHTOP-204ENST00000368694 RIMBP2O15034 1052 aa23.21■■□□□ 1.31
CHTOP-204ENST00000368694 ADCK5Q3MIX3 580 aa23.21■■□□□ 1.31
CHTOP-204ENST00000368694 MTFR1LQ9H019 292 aa23.21■■□□□ 1.31
CHTOP-204ENST00000368694 MAST2Q6P0Q8 1798 aa23.21■■□□□ 1.31
CHTOP-204ENST00000368694 CYP7A1P22680 504 aa23.21■■□□□ 1.31
CHTOP-204ENST00000368694 POLD1P28340 1107 aa23.21■■□□□ 1.31
CHTOP-204ENST00000368694 KIF13BQ9NQT8 1826 aa23.2■■□□□ 1.3
CHTOP-204ENST00000368694 ZBTB22O15209 634 aa23.2■■□□□ 1.3
CHTOP-204ENST00000368694 MBD4O95243 580 aa23.2■■□□□ 1.3
CHTOP-204ENST00000368694 WDR66Q8TBY9 1149 aa23.2■■□□□ 1.3
CHTOP-204ENST00000368694 ZC3H12CQ9C0D7 883 aaKnown RBP23.2■■□□□ 1.3
CHTOP-204ENST00000368694 CYP21A2P08686 494 aa23.2■■□□□ 1.3
CHTOP-204ENST00000368694 NAA16Q6N069 864 aaPredicted RBP23.2■■□□□ 1.3
CHTOP-204ENST00000368694 ZGPATQ8N5A5 531 aaKnown RBP23.2■■□□□ 1.3
CHTOP-204ENST00000368694 TAF6LQ9Y6J9 622 aa23.2■■□□□ 1.3
CHTOP-204ENST00000368694 HSP90AA1P07900 732 aaKnown RBP23.19■■□□□ 1.3
CHTOP-204ENST00000368694 IL1R1P14778 569 aa23.19■■□□□ 1.3
CHTOP-204ENST00000368694 PRDX5P30044 214 aa23.19■■□□□ 1.3
CHTOP-204ENST00000368694 MIGA1Q8NAN2 632 aa23.19■■□□□ 1.3
CHTOP-204ENST00000368694 FOXP2O15409 715 aa23.18■■□□□ 1.3
CHTOP-204ENST00000368694 APPP05067 770 aa23.18■■□□□ 1.3
CHTOP-204ENST00000368694 PSMA5P28066 241 aa23.18■■□□□ 1.3
CHTOP-204ENST00000368694 STRBPQ96SI9 672 aaKnown RBP23.18■■□□□ 1.3
CHTOP-204ENST00000368694 TM6SF1Q9BZW5 370 aa23.18■■□□□ 1.3
CHTOP-204ENST00000368694 SLKQ9H2G2 1235 aaPredicted RBP23.18■■□□□ 1.3
CHTOP-204ENST00000368694 CTNNA3Q9UI47 895 aa23.18■■□□□ 1.3
CHTOP-204ENST00000368694 CPA1P15085 419 aa23.18■■□□□ 1.3
CHTOP-204ENST00000368694 KRT32Q14532 448 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms