RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 PCCAP05165 728 aaPredicted RBP12.71□□□□□ -0.37
NUP43-203ENST00000367404 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.37
NUP43-203ENST00000367404 CCDC152Q4G0S7 254 aa12.71□□□□□ -0.37
NUP43-203ENST00000367404 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.37
NUP43-203ENST00000367404 RASAL3Q86YV0 1011 aa12.71□□□□□ -0.37
NUP43-203ENST00000367404 CCDC191Q8NCU4 936 aa12.71□□□□□ -0.37
NUP43-203ENST00000367404 PHAXQ9H814 394 aaKnown RBP12.71□□□□□ -0.37
NUP43-203ENST00000367404 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
NUP43-203ENST00000367404 XDHP47989 1333 aa12.7□□□□□ -0.38
NUP43-203ENST00000367404 PDE8AO60658 829 aa12.7□□□□□ -0.38
NUP43-203ENST00000367404 FKBP1BP68106 108 aa12.7□□□□□ -0.38
NUP43-203ENST00000367404 ANGEL2Q5VTE6 544 aaKnown RBP12.7□□□□□ -0.38
NUP43-203ENST00000367404 PTCD2Q8WV60 388 aaKnown RBP12.7□□□□□ -0.38
NUP43-203ENST00000367404 CSRNP1Q96S65 589 aa12.7□□□□□ -0.38
NUP43-203ENST00000367404 MYD88Q99836 296 aa12.7□□□□□ -0.38
NUP43-203ENST00000367404 CRISPLD2Q9H0B8 497 aa12.7□□□□□ -0.38
NUP43-203ENST00000367404 IFT57Q9NWB7 429 aa12.7□□□□□ -0.38
NUP43-203ENST00000367404 ANKIB1Q9P2G1 1089 aa12.7□□□□□ -0.38
NUP43-203ENST00000367404 PAPPA2Q9BXP8 1791 aa12.7□□□□□ -0.38
NUP43-203ENST00000367404 TRPA1O75762 1119 aa12.69□□□□□ -0.38
NUP43-203ENST00000367404 SCARF1Q14162 830 aa12.69□□□□□ -0.38
NUP43-203ENST00000367404 MYOZ2Q9NPC6 264 aa12.69□□□□□ -0.38
NUP43-203ENST00000367404 CWC25Q9NXE8 425 aaPredicted RBP12.69□□□□□ -0.38
NUP43-203ENST00000367404 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
NUP43-203ENST00000367404 CASP8AP2Q9UKL3 1982 aa12.69□□□□□ -0.38
NUP43-203ENST00000367404 MED23Q9ULK4 1368 aa12.69□□□□□ -0.38
NUP43-203ENST00000367404 USP17L8P0C7I0 530 aa12.68□□□□□ -0.38
NUP43-203ENST00000367404 ATP2B4P23634 1241 aa12.68□□□□□ -0.38
NUP43-203ENST00000367404 PODNQ7Z5L7 613 aa12.68□□□□□ -0.38
NUP43-203ENST00000367404 METTL22Q9BUU2 404 aaPredicted RBP12.68□□□□□ -0.38
NUP43-203ENST00000367404 PSME4Q14997 1843 aa12.67□□□□□ -0.38
NUP43-203ENST00000367404 USP17L3A6NCW0 530 aa12.67□□□□□ -0.38
NUP43-203ENST00000367404 USP17L4A6NCW7 530 aa12.67□□□□□ -0.38
NUP43-203ENST00000367404 GNAI1P63096 354 aa12.67□□□□□ -0.38
NUP43-203ENST00000367404 USP17L1Q7RTZ2 530 aa12.67□□□□□ -0.38
NUP43-203ENST00000367404 CTU1Q7Z7A3 348 aaKnown RBP12.67□□□□□ -0.38
NUP43-203ENST00000367404 ANKRD18AQ8IVF6 992 aa12.67□□□□□ -0.38
NUP43-203ENST00000367404 CTSWP56202 376 aa12.66□□□□□ -0.38
NUP43-203ENST00000367404 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
NUP43-203ENST00000367404 CCDC85AQ96PX6 553 aaPredicted RBP12.66□□□□□ -0.38
NUP43-203ENST00000367404 DDX58O95786 925 aaKnown RBP12.65□□□□□ -0.38
NUP43-203ENST00000367404 IGKV5-2P06315 115 aa12.65□□□□□ -0.38
NUP43-203ENST00000367404 SOX10P56693 466 aa12.65□□□□□ -0.38
NUP43-203ENST00000367404 DDX10Q13206 875 aaKnown RBP12.65□□□□□ -0.38
NUP43-203ENST00000367404 DACT2Q5SW24 774 aa12.65□□□□□ -0.38
NUP43-203ENST00000367404 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
NUP43-203ENST00000367404 JARID2Q92833 1246 aaPredicted RBP12.65□□□□□ -0.38
NUP43-203ENST00000367404 CDC5LQ99459 802 aaKnown RBP12.65□□□□□ -0.38
NUP43-203ENST00000367404 BSDC1Q9NW68 430 aaPredicted RBP12.65□□□□□ -0.38
NUP43-203ENST00000367404 ZNF646O15015 1829 aaPredicted RBP12.65□□□□□ -0.39
NUP43-203ENST00000367404 MYO3BQ8WXR4 1341 aa12.64□□□□□ -0.39
NUP43-203ENST00000367404 WTIPA6NIX2 430 aaPredicted RBP12.64□□□□□ -0.39
NUP43-203ENST00000367404 ELL2O00472 640 aaPredicted RBP12.64□□□□□ -0.39
NUP43-203ENST00000367404 APAF1O14727 1248 aa12.64□□□□□ -0.39
NUP43-203ENST00000367404 NOM1Q5C9Z4 860 aaKnown RBP12.64□□□□□ -0.39
NUP43-203ENST00000367404 MOB2Q70IA6 237 aa12.64□□□□□ -0.39
NUP43-203ENST00000367404 TTLL11Q8NHH1 800 aa12.64□□□□□ -0.39
NUP43-203ENST00000367404 CHMP4AQ9BY43 222 aa12.64□□□□□ -0.39
NUP43-203ENST00000367404 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
NUP43-203ENST00000367404 WNT10BO00744 389 aa12.63□□□□□ -0.39
NUP43-203ENST00000367404 MMP14P50281 582 aa12.63□□□□□ -0.39
NUP43-203ENST00000367404 PKN2Q16513 984 aaKnown RBP12.63□□□□□ -0.39
NUP43-203ENST00000367404 NBPF9Q3BBW0 867 aa12.63□□□□□ -0.39
NUP43-203ENST00000367404 STRIP1Q5VSL9 837 aa12.63□□□□□ -0.39
NUP43-203ENST00000367404 CCDC30Q5VVM6 783 aa12.63□□□□□ -0.39
NUP43-203ENST00000367404 CFHR5Q9BXR6 569 aa12.63□□□□□ -0.39
NUP43-203ENST00000367404 GREM2Q9H772 168 aa12.63□□□□□ -0.39
NUP43-203ENST00000367404 PRKRIP1Q9H875 184 aaPredicted RBP12.63□□□□□ -0.39
NUP43-203ENST00000367404 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
NUP43-203ENST00000367404 MAP3K2Q9Y2U5 619 aa12.63□□□□□ -0.39
NUP43-203ENST00000367404 PI4KAP2A4QPH2 592 aa12.62□□□□□ -0.39
NUP43-203ENST00000367404 UBE2Q2LH0YL09 131 aa12.62□□□□□ -0.39
NUP43-203ENST00000367404 TM4SF4P48230 202 aa12.62□□□□□ -0.39
NUP43-203ENST00000367404 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
NUP43-203ENST00000367404 KSR2Q6VAB6 950 aa12.62□□□□□ -0.39
NUP43-203ENST00000367404 TSPYL6Q8N831 410 aa12.62□□□□□ -0.39
NUP43-203ENST00000367404 PI4KAP1Q8N8J0 262 aa12.62□□□□□ -0.39
NUP43-203ENST00000367404 ZNF296Q8WUU4 475 aaPredicted RBP12.62□□□□□ -0.39
NUP43-203ENST00000367404 MXD3Q9BW11 206 aa12.62□□□□□ -0.39
NUP43-203ENST00000367404 COA1Q9GZY4 146 aa12.62□□□□□ -0.39
NUP43-203ENST00000367404 SCAF8Q9UPN6 1271 aaKnown RBP12.62□□□□□ -0.39
NUP43-203ENST00000367404 COL1A1P02452 1464 aaPredicted RBP12.61□□□□□ -0.39
NUP43-203ENST00000367404 NEURL1BA8MQ27 555 aa12.61□□□□□ -0.39
NUP43-203ENST00000367404 PDE4AP27815 886 aa12.61□□□□□ -0.39
NUP43-203ENST00000367404 PPP1R15BQ5SWA1 713 aa12.61□□□□□ -0.39
NUP43-203ENST00000367404 PRAMEF18Q5VWM3 479 aa12.61□□□□□ -0.39
NUP43-203ENST00000367404 OGFOD1Q8N543 542 aa12.61□□□□□ -0.39
NUP43-203ENST00000367404 ZBED3Q96IU2 234 aaPredicted RBP12.61□□□□□ -0.39
NUP43-203ENST00000367404 LEMD3Q9Y2U8 911 aa12.61□□□□□ -0.39
NUP43-203ENST00000367404 POLR2AP24928 1970 aaKnown RBP12.61□□□□□ -0.39
NUP43-203ENST00000367404 H7C1W4 665 aa12.6□□□□□ -0.39
NUP43-203ENST00000367404 PRPF38BQ5VTL8 546 aaKnown RBP12.6□□□□□ -0.39
NUP43-203ENST00000367404 POTEEQ6S8J3 1075 aa12.6□□□□□ -0.39
NUP43-203ENST00000367404 TXNRD3Q86VQ6 643 aa12.6□□□□□ -0.39
NUP43-203ENST00000367404 PLA2G12BQ9BX93 195 aa12.6□□□□□ -0.39
NUP43-203ENST00000367404 HTTP42858 3142 aa12.6□□□□□ -0.39
NUP43-203ENST00000367404 AKAP11Q9UKA4 1901 aa12.59□□□□□ -0.39
NUP43-203ENST00000367404 GPR25O00155 361 aa12.59□□□□□ -0.39
NUP43-203ENST00000367404 SASH1O94885 1247 aa12.59□□□□□ -0.39
NUP43-203ENST00000367404 TBC1D8O95759 1140 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms