RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 SUCLG2Q96I99 432 aa18.67■□□□□ 0.58
CTSD-202ENST00000367196 ZBED3Q96IU2 234 aaPredicted RBP18.67■□□□□ 0.58
CTSD-202ENST00000367196 PPP2R3BQ9Y5P8 575 aa18.67■□□□□ 0.58
CTSD-202ENST00000367196 SNAP23O00161 211 aa18.66■□□□□ 0.58
CTSD-202ENST00000367196 NBPF7P0C2Y1 421 aaPredicted RBP18.66■□□□□ 0.58
CTSD-202ENST00000367196 CSRNP1Q96S65 589 aa18.66■□□□□ 0.58
CTSD-202ENST00000367196 RNF186Q9NXI6 227 aa18.66■□□□□ 0.58
CTSD-202ENST00000367196 SCAF8Q9UPN6 1271 aaKnown RBP18.66■□□□□ 0.58
CTSD-202ENST00000367196 ARAP2Q8WZ64 1704 aa18.66■□□□□ 0.58
CTSD-202ENST00000367196 UBE2Q2LH0YL09 131 aa18.65■□□□□ 0.58
CTSD-202ENST00000367196 TRPA1O75762 1119 aa18.65■□□□□ 0.58
CTSD-202ENST00000367196 DGKZQ13574 1117 aa18.65■□□□□ 0.58
CTSD-202ENST00000367196 ALDH1L2Q3SY69 923 aa18.65■□□□□ 0.58
CTSD-202ENST00000367196 RABL6Q3YEC7 729 aaPredicted RBP18.65■□□□□ 0.58
CTSD-202ENST00000367196 CERS5Q8N5B7 392 aa18.65■□□□□ 0.58
CTSD-202ENST00000367196 MCOLN1Q9GZU1 580 aa18.65■□□□□ 0.58
CTSD-202ENST00000367196 CCDC85CA6NKD9 419 aa18.64■□□□□ 0.57
CTSD-202ENST00000367196 F8W031 263 aaPredicted RBP18.64■□□□□ 0.57
CTSD-202ENST00000367196 HIBADHP31937 336 aaKnown RBP18.64■□□□□ 0.57
CTSD-202ENST00000367196 SLFN5Q08AF3 891 aa18.64■□□□□ 0.57
CTSD-202ENST00000367196 CFAP100Q494V2 611 aa18.64■□□□□ 0.57
CTSD-202ENST00000367196 PRAMEF18Q5VWM3 479 aa18.64■□□□□ 0.57
CTSD-202ENST00000367196 VPS37DQ86XT2 251 aa18.64■□□□□ 0.57
CTSD-202ENST00000367196 DEFB129Q9H1M3 183 aa18.64■□□□□ 0.57
CTSD-202ENST00000367196 BICC1Q9H694 974 aaKnown RBP18.64■□□□□ 0.57
CTSD-202ENST00000367196 FAM205AQ6ZU69 1335 aa18.64■□□□□ 0.57
CTSD-202ENST00000367196 SPDYE2BA6NHP3 402 aa18.63■□□□□ 0.57
CTSD-202ENST00000367196 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
CTSD-202ENST00000367196 SPDYE6P0CI01 402 aa18.63■□□□□ 0.57
CTSD-202ENST00000367196 RBM5P52756 815 aaKnown RBP eCLIP18.63■□□□□ 0.57
CTSD-202ENST00000367196 SREBF2Q12772 1141 aa18.63■□□□□ 0.57
CTSD-202ENST00000367196 MOB2Q70IA6 237 aa18.63■□□□□ 0.57
CTSD-202ENST00000367196 SSH1Q8WYL5 1049 aa18.63■□□□□ 0.57
CTSD-202ENST00000367196 KAZALD1Q96I82 304 aa18.63■□□□□ 0.57
CTSD-202ENST00000367196 PPP1R12BO60237 982 aaPredicted RBP18.62■□□□□ 0.57
CTSD-202ENST00000367196 TNFAIP1Q13829 316 aa18.62■□□□□ 0.57
CTSD-202ENST00000367196 SUPT20HL1Q3ZLR7 823 aa18.62■□□□□ 0.57
CTSD-202ENST00000367196 CAVIN4Q5BKX8 364 aa18.62■□□□□ 0.57
CTSD-202ENST00000367196 MFSD14BQ5SR56 506 aa18.62■□□□□ 0.57
CTSD-202ENST00000367196 TDRD7Q8NHU6 1098 aaKnown RBP18.62■□□□□ 0.57
CTSD-202ENST00000367196 RIPOR2Q9Y4F9 1068 aa18.62■□□□□ 0.57
CTSD-202ENST00000367196 METTL24Q5JXM2 366 aa18.61■□□□□ 0.57
CTSD-202ENST00000367196 SMC4Q9NTJ3 1288 aa18.61■□□□□ 0.57
CTSD-202ENST00000367196 SERPINA10Q9UK55 444 aa18.61■□□□□ 0.57
CTSD-202ENST00000367196 UNCXA6NJT0 531 aa18.6■□□□□ 0.57
CTSD-202ENST00000367196 GYG1P46976 350 aa18.6■□□□□ 0.57
CTSD-202ENST00000367196 PRKG1Q13976 671 aa18.6■□□□□ 0.57
CTSD-202ENST00000367196 TBC1D22AQ8WUA7 517 aa18.6■□□□□ 0.57
CTSD-202ENST00000367196 FAM84BQ96KN1 310 aaPredicted RBP18.6■□□□□ 0.57
CTSD-202ENST00000367196 PUS3Q9BZE2 481 aaKnown RBP18.6■□□□□ 0.57
CTSD-202ENST00000367196 VEZTQ9HBM0 779 aa18.6■□□□□ 0.57
CTSD-202ENST00000367196 ANGEL1Q9UNK9 670 aaKnown RBP18.6■□□□□ 0.57
CTSD-202ENST00000367196 TTF2Q9UNY4 1162 aaKnown RBP18.6■□□□□ 0.57
CTSD-202ENST00000367196 JAG2Q9Y219 1238 aa18.6■□□□□ 0.57
CTSD-202ENST00000367196 FRAT2O75474 233 aaPredicted RBP18.59■□□□□ 0.57
CTSD-202ENST00000367196 ANKRD44Q8N8A2 993 aa18.59■□□□□ 0.57
CTSD-202ENST00000367196 HDAC5Q9UQL6 1122 aa18.59■□□□□ 0.57
CTSD-202ENST00000367196 KIF16BQ96L93 1317 aa18.58■□□□□ 0.57
CTSD-202ENST00000367196 CLRN2A0PK11 232 aa18.58■□□□□ 0.56
CTSD-202ENST00000367196 PDE8BO95263 885 aa18.58■□□□□ 0.56
CTSD-202ENST00000367196 TM4SF4P48230 202 aa18.58■□□□□ 0.56
CTSD-202ENST00000367196 PTPN12Q05209 780 aaKnown RBP18.58■□□□□ 0.56
CTSD-202ENST00000367196 MAP3K11Q16584 847 aa18.58■□□□□ 0.56
CTSD-202ENST00000367196 LDLRAD1Q5T700 205 aa18.58■□□□□ 0.56
CTSD-202ENST00000367196 PRMT6Q96LA8 375 aaPredicted RBP18.58■□□□□ 0.56
CTSD-202ENST00000367196 USP44Q9H0E7 712 aa18.58■□□□□ 0.56
CTSD-202ENST00000367196 CCER2I3L3R5 266 aa18.57■□□□□ 0.56
CTSD-202ENST00000367196 IFIT1P09914 478 aaKnown RBP18.57■□□□□ 0.56
CTSD-202ENST00000367196 ZBTB48P10074 688 aaPredicted RBP18.57■□□□□ 0.56
CTSD-202ENST00000367196 IREB2P48200 963 aaKnown RBP18.57■□□□□ 0.56
CTSD-202ENST00000367196 PUM3Q15397 648 aaKnown RBP18.57■□□□□ 0.56
CTSD-202ENST00000367196 LRRC24Q50LG9 513 aa18.57■□□□□ 0.56
CTSD-202ENST00000367196 CTU1Q7Z7A3 348 aaKnown RBP18.57■□□□□ 0.56
CTSD-202ENST00000367196 ALDH1A1P00352 501 aa18.56■□□□□ 0.56
CTSD-202ENST00000367196 INHBEP58166 350 aa18.56■□□□□ 0.56
CTSD-202ENST00000367196 SPDYE2Q495Y8 402 aa18.56■□□□□ 0.56
CTSD-202ENST00000367196 NOM1Q5C9Z4 860 aaKnown RBP18.56■□□□□ 0.56
CTSD-202ENST00000367196 FBXO33Q7Z6M2 555 aa18.56■□□□□ 0.56
CTSD-202ENST00000367196 VGLL2Q8N8G2 317 aa18.56■□□□□ 0.56
CTSD-202ENST00000367196 SLC10A4Q96EP9 437 aa18.56■□□□□ 0.56
CTSD-202ENST00000367196 SSC5DA1L4H1 1573 aa18.55■□□□□ 0.56
CTSD-202ENST00000367196 MAST3O60307 1309 aa18.55■□□□□ 0.56
CTSD-202ENST00000367196 MANSC4A6NHS7 340 aaPredicted RBP18.55■□□□□ 0.56
CTSD-202ENST00000367196 UBTFL1P0CB47 393 aaPredicted RBP18.55■□□□□ 0.56
CTSD-202ENST00000367196 TNNI2P48788 182 aa18.55■□□□□ 0.56
CTSD-202ENST00000367196 HDLBPQ00341 1268 aaKnown RBP18.55■□□□□ 0.56
CTSD-202ENST00000367196 MKRN3Q13064 507 aaKnown RBP18.55■□□□□ 0.56
CTSD-202ENST00000367196 RASA3Q14644 834 aa18.55■□□□□ 0.56
CTSD-202ENST00000367196 SPRYD7Q5W111 196 aa18.55■□□□□ 0.56
CTSD-202ENST00000367196 TRMT2AQ8IZ69 625 aaKnown RBP18.55■□□□□ 0.56
CTSD-202ENST00000367196 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
CTSD-202ENST00000367196 API5Q9BZZ5 524 aaKnown RBP18.55■□□□□ 0.56
CTSD-202ENST00000367196 PCDHAC2Q9Y5I4 1007 aa18.55■□□□□ 0.56
CTSD-202ENST00000367196 LAMB1P07942 1786 aa18.55■□□□□ 0.56
CTSD-202ENST00000367196 MYH13Q9UKX3 1938 aa18.55■□□□□ 0.56
CTSD-202ENST00000367196 CRKP46108 304 aa18.54■□□□□ 0.56
CTSD-202ENST00000367196 RGS19P49795 217 aa18.54■□□□□ 0.56
CTSD-202ENST00000367196 MLLT1Q03111 559 aaPredicted RBP18.54■□□□□ 0.56
CTSD-202ENST00000367196 PKN2Q16513 984 aaKnown RBP18.54■□□□□ 0.56
CTSD-202ENST00000367196 DZIP1LQ8IYY4 767 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms