RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 VAMP4O75379 141 aa14.24□□□□□ -0.13
H3F3A-203ENST00000366815 CCDC152Q4G0S7 254 aa14.24□□□□□ -0.13
H3F3A-203ENST00000366815 CIAPIN1Q6FI81 312 aa14.24□□□□□ -0.13
H3F3A-203ENST00000366815 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
H3F3A-203ENST00000366815 SPEF2Q9C093 1822 aa14.24□□□□□ -0.13
H3F3A-203ENST00000366815 NEURL1BA8MQ27 555 aa14.23□□□□□ -0.13
H3F3A-203ENST00000366815 RAD17O75943 681 aa14.23□□□□□ -0.13
H3F3A-203ENST00000366815 OSBPP22059 807 aa14.23□□□□□ -0.13
H3F3A-203ENST00000366815 GMPSP49915 693 aaPredicted RBP14.23□□□□□ -0.13
H3F3A-203ENST00000366815 EXOSC9Q06265 439 aaKnown RBP14.23□□□□□ -0.13
H3F3A-203ENST00000366815 FLIIQ13045 1269 aa14.23□□□□□ -0.13
H3F3A-203ENST00000366815 WASHC4Q2M389 1173 aa14.23□□□□□ -0.13
H3F3A-203ENST00000366815 CWF19L2Q2TBE0 894 aaKnown RBP14.23□□□□□ -0.13
H3F3A-203ENST00000366815 USP50Q70EL3 339 aaPredicted RBP14.23□□□□□ -0.13
H3F3A-203ENST00000366815 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
H3F3A-203ENST00000366815 PODXL2Q9NZ53 605 aa14.23□□□□□ -0.13
H3F3A-203ENST00000366815 SCN9AQ15858 1988 aa14.23□□□□□ -0.13
H3F3A-203ENST00000366815 TRPM7Q96QT4 1865 aa14.23□□□□□ -0.13
H3F3A-203ENST00000366815 CNTNAP1P78357 1384 aa14.22□□□□□ -0.13
H3F3A-203ENST00000366815 TMEM88BA6NKF7 163 aa14.22□□□□□ -0.13
H3F3A-203ENST00000366815 CTSWP56202 376 aa14.22□□□□□ -0.13
H3F3A-203ENST00000366815 NEXNQ0ZGT2 675 aa14.22□□□□□ -0.13
H3F3A-203ENST00000366815 TNIP1Q15025 636 aa14.22□□□□□ -0.13
H3F3A-203ENST00000366815 C6orf132Q5T0Z8 1188 aa14.22□□□□□ -0.13
H3F3A-203ENST00000366815 ANKK1Q8NFD2 765 aa14.22□□□□□ -0.13
H3F3A-203ENST00000366815 TBC1D16Q8TBP0 767 aa14.22□□□□□ -0.13
H3F3A-203ENST00000366815 ADARB2Q9NS39 739 aaKnown RBP14.22□□□□□ -0.13
H3F3A-203ENST00000366815 MKRN1Q9UHC7 482 aaKnown RBP14.22□□□□□ -0.13
H3F3A-203ENST00000366815 PSME4Q14997 1843 aa14.22□□□□□ -0.13
H3F3A-203ENST00000366815 RTL9Q8NET4 1388 aa14.22□□□□□ -0.13
H3F3A-203ENST00000366815 C6orf229H3BNL8 230 aa14.21□□□□□ -0.13
H3F3A-203ENST00000366815 H7C1W4 665 aa14.21□□□□□ -0.13
H3F3A-203ENST00000366815 TTLL11Q8NHH1 800 aa14.21□□□□□ -0.13
H3F3A-203ENST00000366815 GPR101Q96P66 508 aaPredicted RBP14.21□□□□□ -0.13
H3F3A-203ENST00000366815 CCDC85AQ96PX6 553 aaPredicted RBP14.21□□□□□ -0.13
H3F3A-203ENST00000366815 DBNDD1Q9H9R9 158 aa14.21□□□□□ -0.13
H3F3A-203ENST00000366815 FKBP5Q13451 457 aaPredicted RBP14.2□□□□□ -0.14
H3F3A-203ENST00000366815 GCKRQ14397 625 aa14.2□□□□□ -0.14
H3F3A-203ENST00000366815 DNAAF4Q8WXU2 420 aa14.2□□□□□ -0.14
H3F3A-203ENST00000366815 EYA3Q99504 573 aa14.2□□□□□ -0.14
H3F3A-203ENST00000366815 KIAA1468Q9P260 1216 aa14.2□□□□□ -0.14
H3F3A-203ENST00000366815 ZNF521Q96K83 1311 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 SHTN1A0MZ66 631 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 PSMD14O00487 310 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 MAP3K7O43318 606 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 ECE2O60344 883 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 CASP7P55210 303 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 FMR1Q06787 632 aaKnown RBP eCLIP14.19□□□□□ -0.14
H3F3A-203ENST00000366815 UBE3BQ7Z3V4 1068 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 ANKRD18AQ8IVF6 992 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 BCL2L13Q9BXK5 485 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 GREM2Q9H772 168 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 PGAP2Q9UHJ9 254 aa14.19□□□□□ -0.14
H3F3A-203ENST00000366815 UFL1O94874 794 aa14.18□□□□□ -0.14
H3F3A-203ENST00000366815 HSPA1AP0DMV8 641 aaKnown RBP14.18□□□□□ -0.14
H3F3A-203ENST00000366815 HSPA1BP0DMV9 641 aaKnown RBP14.18□□□□□ -0.14
H3F3A-203ENST00000366815 HIRAP54198 1017 aaPredicted RBP14.18□□□□□ -0.14
H3F3A-203ENST00000366815 LINS1Q8NG48 757 aa14.18□□□□□ -0.14
H3F3A-203ENST00000366815 DPF2Q92785 391 aa14.18□□□□□ -0.14
H3F3A-203ENST00000366815 CDC5LQ99459 802 aaKnown RBP14.18□□□□□ -0.14
H3F3A-203ENST00000366815 PLA2G12BQ9BX93 195 aa14.18□□□□□ -0.14
H3F3A-203ENST00000366815 MYH16Q9H6N6 1097 aa14.18□□□□□ -0.14
H3F3A-203ENST00000366815 KCNQ5Q9NR82 932 aa14.18□□□□□ -0.14
H3F3A-203ENST00000366815 ANKIB1Q9P2G1 1089 aa14.18□□□□□ -0.14
H3F3A-203ENST00000366815 CNOT7Q9UIV1 285 aaKnown RBP14.18□□□□□ -0.14
H3F3A-203ENST00000366815 GGA1Q9UJY5 639 aa14.18□□□□□ -0.14
H3F3A-203ENST00000366815 ZNF646O15015 1829 aaPredicted RBP14.18□□□□□ -0.14
H3F3A-203ENST00000366815 XDHP47989 1333 aa14.17□□□□□ -0.14
H3F3A-203ENST00000366815 RASSF10A6NK89 507 aa14.17□□□□□ -0.14
H3F3A-203ENST00000366815 COL13A1Q5TAT6 717 aaPredicted RBP14.17□□□□□ -0.14
H3F3A-203ENST00000366815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.17□□□□□ -0.14
H3F3A-203ENST00000366815 LAPTM4BQ86VI4 370 aa14.17□□□□□ -0.14
H3F3A-203ENST00000366815 TRPM4Q8TD43 1214 aa14.17□□□□□ -0.14
H3F3A-203ENST00000366815 ZC3H12CQ9C0D7 883 aaKnown RBP14.17□□□□□ -0.14
H3F3A-203ENST00000366815 ZNF609O15014 1411 aa14.16□□□□□ -0.14
H3F3A-203ENST00000366815 THSD7BQ9C0I4 1608 aa14.16□□□□□ -0.14
H3F3A-203ENST00000366815 TRAF5O00463 557 aa14.16□□□□□ -0.14
H3F3A-203ENST00000366815 VEGFBP49765 207 aa14.16□□□□□ -0.14
H3F3A-203ENST00000366815 CST9Q5W186 159 aa14.16□□□□□ -0.14
H3F3A-203ENST00000366815 ZC3H15Q8WU90 426 aaKnown RBP14.16□□□□□ -0.14
H3F3A-203ENST00000366815 BSDC1Q9NW68 430 aaPredicted RBP14.16□□□□□ -0.14
H3F3A-203ENST00000366815 A0A1B0GUL6 1792 aa14.16□□□□□ -0.14
H3F3A-203ENST00000366815 WTIPA6NIX2 430 aaPredicted RBP14.15□□□□□ -0.14
H3F3A-203ENST00000366815 F6X3S4 739 aa14.15□□□□□ -0.14
H3F3A-203ENST00000366815 H7C1D1 291 aa14.15□□□□□ -0.14
H3F3A-203ENST00000366815 CSF1RP07333 972 aa14.15□□□□□ -0.14
H3F3A-203ENST00000366815 ATP2B4P23634 1241 aa14.15□□□□□ -0.14
H3F3A-203ENST00000366815 RPS12P25398 132 aaKnown RBP14.15□□□□□ -0.14
H3F3A-203ENST00000366815 MINPP1Q9UNW1 487 aa14.15□□□□□ -0.14
H3F3A-203ENST00000366815 MED23Q9ULK4 1368 aa14.14□□□□□ -0.15
H3F3A-203ENST00000366815 EGFRP00533 1210 aa14.14□□□□□ -0.15
H3F3A-203ENST00000366815 VIL1P09327 827 aaKnown RBP14.14□□□□□ -0.15
H3F3A-203ENST00000366815 BCAMP50895 628 aa14.14□□□□□ -0.15
H3F3A-203ENST00000366815 DEFB115Q30KQ5 88 aa14.14□□□□□ -0.15
H3F3A-203ENST00000366815 FAM161AQ3B820 660 aa14.14□□□□□ -0.15
H3F3A-203ENST00000366815 BEND3Q5T5X7 828 aa14.14□□□□□ -0.15
H3F3A-203ENST00000366815 RBM26Q5T8P6 1007 aaKnown RBP14.14□□□□□ -0.15
H3F3A-203ENST00000366815 SAMD7Q7Z3H4 446 aa14.14□□□□□ -0.15
H3F3A-203ENST00000366815 GLIS2Q9BZE0 524 aaPredicted RBP14.14□□□□□ -0.15
H3F3A-203ENST00000366815 POLR2AP24928 1970 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms