RNA–Protein interactions for RNA: ENST00000361391.10

CTNND1-203, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-203ENST00000361391 MCM9Q9NXL9 1143 aa9.14□□□□□ -0.95
CTNND1-203ENST00000361391 ATP8B2P98198 1209 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 FAM160A1Q05DH4 1040 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 RAPGEF1Q13905 1077 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 CCDC6Q16204 474 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 MSL1Q68DK7 614 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 A0A1B0GVL5 298 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 PABPN1LA6NDY0 278 aaKnown RBP9.13□□□□□ -0.95
CTNND1-203ENST00000361391 PSMA7O14818 248 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 NFATC2IPQ8NCF5 419 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 SELENOOQ9BVL4 669 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 LRRC27Q9C0I9 530 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 BICC1Q9H694 974 aaKnown RBP9.13□□□□□ -0.95
CTNND1-203ENST00000361391 HSPA4P34932 840 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 EIF4A2Q14240 407 aaKnown RBP9.13□□□□□ -0.95
CTNND1-203ENST00000361391 ZNF174Q15697 407 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 ANKRD44Q8N8A2 993 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 BBXQ8WY36 941 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-203ENST00000361391 GTF3C6Q969F1 213 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 TCHPQ9BT92 498 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 CNNM2Q9H8M5 875 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 TLDC2A0PJX2 215 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 FAM13AO94988 1023 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 EIF6P56537 245 aaKnown RBP9.13□□□□□ -0.95
CTNND1-203ENST00000361391 LONRF3Q496Y0 759 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 C6orf163Q5TEZ5 329 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 PPM1EQ8WY54 764 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 GOLGA1Q92805 767 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 CCDC114Q96M63 670 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 UTP14AQ9BVJ6 771 aaKnown RBP9.13□□□□□ -0.95
CTNND1-203ENST00000361391 RABEP2Q9H5N1 569 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 RASAL2Q9UJF2 1139 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 MSH6P52701 1360 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 ANKRD36BQ8N2N9 1353 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 MAP3K1Q13233 1512 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 TACC1O75410 805 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 SIRT1Q96EB6 747 aa9.13□□□□□ -0.95
CTNND1-203ENST00000361391 TEX13AQ9BXU3 409 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-203ENST00000361391 TIGD1Q96MW7 591 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 MAPK8IP1Q9UQF2 711 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 CAPN2P17655 700 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 CEP85Q6P2H3 762 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 RRP36Q96EU6 259 aaKnown RBP9.12□□□□□ -0.95
CTNND1-203ENST00000361391 C14orf93Q9H972 538 aaKnown RBP9.12□□□□□ -0.95
CTNND1-203ENST00000361391 KCNK9Q9NPC2 374 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 VWA3AA6NCI4 1184 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 TRIM75PA6NK02 468 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 RNF113AO15541 343 aaKnown RBP9.12□□□□□ -0.95
CTNND1-203ENST00000361391 HARSP12081 509 aaKnown RBP9.12□□□□□ -0.95
CTNND1-203ENST00000361391 SF3A3Q12874 501 aaKnown RBP eCLIP9.12□□□□□ -0.952e-7■■■□□ 14.9
CTNND1-203ENST00000361391 C17orf53Q8N3J3 647 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-203ENST00000361391 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
CTNND1-203ENST00000361391 UNC13AQ9UPW8 1703 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 PSMC4P43686 418 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 GPR162Q16538 588 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 RUFY3Q7L099 469 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 DZIP3Q86Y13 1208 aaKnown RBP9.12□□□□□ -0.95
CTNND1-203ENST00000361391 CHMP2AO43633 222 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 PROCA1Q8NCQ7 364 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-203ENST00000361391 NEK11Q8NG66 645 aa9.12□□□□□ -0.95
CTNND1-203ENST00000361391 CCDC172P0C7W6 258 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 KSR2Q6VAB6 950 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 CEP57Q86XR8 500 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 C8orf37Q96NL8 207 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 FERMT1Q9BQL6 677 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 SLU7O95391 586 aaKnown RBP9.11□□□□□ -0.95
CTNND1-203ENST00000361391 UBLCP1Q8WVY7 318 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-203ENST00000361391 SSX2IPQ9Y2D8 614 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 NDUFB9Q9Y6M9 179 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 GRIN2AQ12879 1464 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 NSD2O96028 1365 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 KIF5AQ12840 1032 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 UAP1Q16222 522 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-203ENST00000361391 OTUD7AQ8TE49 926 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-203ENST00000361391 ZNF526Q8TF50 670 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-203ENST00000361391 CCDC42Q96M95 316 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 C6orf50Q9HD87 102 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 IL16Q14005 1332 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 NCKAP5LQ9HCH0 1330 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 ASXL1Q8IXJ9 1541 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 SPDYE3A6NKU9 549 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 GTF2A1P52655 376 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-203ENST00000361391 BIRC2Q13490 618 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 KLHDC4Q8TBB5 520 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 HGSO14964 777 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-203ENST00000361391 ZFYP08048 801 aaPredicted RBP9.11□□□□□ -0.95
CTNND1-203ENST00000361391 KRT5P13647 590 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 ZNF804AQ7Z570 1209 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 DDX23Q9BUQ8 820 aaKnown RBP9.11□□□□□ -0.95
CTNND1-203ENST00000361391 NSRP1Q9H0G5 558 aaKnown RBP9.11□□□□□ -0.95
CTNND1-203ENST00000361391 GPCPD1Q9NPB8 672 aa9.11□□□□□ -0.95
CTNND1-203ENST00000361391 THOC2Q8NI27 1593 aaKnown RBP9.1□□□□□ -0.95
CTNND1-203ENST00000361391 ZBTB16Q05516 673 aa9.1□□□□□ -0.95
CTNND1-203ENST00000361391 PPP1R7Q15435 360 aa9.1□□□□□ -0.95
CTNND1-203ENST00000361391 ZKSCAN5Q9Y2L8 839 aa9.1□□□□□ -0.95
CTNND1-203ENST00000361391 IRS4O14654 1257 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-203ENST00000361391 IL15P40933 162 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-203ENST00000361391 KRT9P35527 623 aa9.1□□□□□ -0.95
CTNND1-203ENST00000361391 LETM2Q2VYF4 491 aa9.1□□□□□ -0.95
CTNND1-203ENST00000361391 MAEAQ7L5Y9 396 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms