RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 NBPF5PQ86XG9 351 aaPredicted RBP10.62□□□□□ -0.71
TOP1-201ENST00000361337 TDRD7Q8NHU6 1098 aaKnown RBP10.62□□□□□ -0.71
TOP1-201ENST00000361337 ST7Q9NRC1 585 aa10.62□□□□□ -0.71
TOP1-201ENST00000361337 RGPD5Q99666 1765 aa10.62□□□□□ -0.71
TOP1-201ENST00000361337 C10orf67Q8IYJ2 551 aa10.62□□□□□ -0.71
TOP1-201ENST00000361337 KIF20AO95235 890 aa10.62□□□□□ -0.71
TOP1-201ENST00000361337 TTC39AQ5SRH9 613 aa10.62□□□□□ -0.71
TOP1-201ENST00000361337 SAMD1Q6SPF0 538 aaPredicted RBP10.62□□□□□ -0.71
TOP1-201ENST00000361337 RBM43Q6ZSC3 357 aaKnown RBP10.62□□□□□ -0.71
TOP1-201ENST00000361337 ZNF215Q9UL58 517 aaPredicted RBP10.62□□□□□ -0.71
TOP1-201ENST00000361337 SOS2Q07890 1332 aaPredicted RBP10.62□□□□□ -0.71
TOP1-201ENST00000361337 APBA3O96018 575 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 BLOC1S2Q6QNY1 142 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 EVI5LQ96CN4 794 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 KAZALD1Q96I82 304 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 NRDCO43847 1150 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 TAF5LO75529 589 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 RPS6KB1P23443 525 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 KMT5BQ4FZB7 885 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 OGFRQ9NZT2 677 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 COL15A1P39059 1388 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 GOLIM4O00461 696 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 IRS4O14654 1257 aaPredicted RBP10.61□□□□□ -0.71
TOP1-201ENST00000361337 PTF1AQ7RTS3 328 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 FILIP1Q7Z7B0 1213 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 LRRC8AQ8IWT6 810 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 GOLGA6L1Q8N7Z2 621 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 BRF1Q92994 677 aa10.61□□□□□ -0.71
TOP1-201ENST00000361337 DDX41Q9UJV9 622 aaKnown RBP10.61□□□□□ -0.71
TOP1-201ENST00000361337 IQCB1Q15051 598 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 RRP12Q5JTH9 1297 aaKnown RBP10.6□□□□□ -0.71
TOP1-201ENST00000361337 CEP135Q66GS9 1140 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 TTLL5Q6EMB2 1281 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 CCDC129Q6ZRS4 1044 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 SCAND2PQ9GZW5 306 aaPredicted RBP10.6□□□□□ -0.71
TOP1-201ENST00000361337 GOLPH3LQ9H4A5 285 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 TULP1O00294 542 aaPredicted RBP10.6□□□□□ -0.71
TOP1-201ENST00000361337 TFCP2Q12800 502 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 GCKRQ14397 625 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 TAF3Q5VWG9 929 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 KIF18AQ8NI77 898 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 DDX19AQ9NUU7 478 aaKnown RBP10.6□□□□□ -0.71
TOP1-201ENST00000361337 SRP68Q9UHB9 627 aaKnown RBP10.6□□□□□ -0.71
TOP1-201ENST00000361337 PHLPP1O60346 1717 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 BECN2A8MW95 431 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 HLFQ16534 295 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 SLFNL1Q499Z3 407 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 LRRN4CLQ8ND94 238 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 SEC62Q99442 399 aaKnown RBP10.6□□□□□ -0.71
TOP1-201ENST00000361337 FEZ1Q99689 392 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 ATG3Q9NT62 314 aa10.6□□□□□ -0.71
TOP1-201ENST00000361337 RTCBQ9Y3I0 505 aaKnown RBP10.6□□□□□ -0.71
TOP1-201ENST00000361337 PLEKHG2Q9H7P9 1386 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 GOLGA6L19H0YKK7 550 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 SLFN14P0C7P3 912 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 RESTQ13127 1097 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 METTL22Q9BUU2 404 aaPredicted RBP10.59□□□□□ -0.71
TOP1-201ENST00000361337 SRRTQ9BXP5 876 aaKnown RBP10.59□□□□□ -0.71
TOP1-201ENST00000361337 ANKIB1Q9P2G1 1089 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 ERVV-2B6SEH9 535 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 MARCH10Q8NA82 808 aaPredicted RBP10.59□□□□□ -0.71
TOP1-201ENST00000361337 SETDB2Q96T68 719 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 NEURL1BA8MQ27 555 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 SKILP12757 684 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 IGHMBP2P38935 993 aaKnown RBP10.59□□□□□ -0.71
TOP1-201ENST00000361337 MTX1Q13505 466 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 ELF2Q15723 593 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
TOP1-201ENST00000361337 ZNF622Q969S3 477 aaKnown RBP eCLIP10.59□□□□□ -0.712e-9■■■□□ 14.7
TOP1-201ENST00000361337 TEX13AQ9BXU3 409 aaPredicted RBP10.59□□□□□ -0.71
TOP1-201ENST00000361337 PDCP20941 246 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 CRKLP46109 303 aaKnown RBP10.58□□□□□ -0.72
TOP1-201ENST00000361337 FBXO38Q6PIJ6 1188 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 IFIT1P09914 478 aaKnown RBP10.58□□□□□ -0.72
TOP1-201ENST00000361337 GPS2Q13227 327 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 GTF3C6Q969F1 213 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 PUS3Q9BZE2 481 aaKnown RBP10.58□□□□□ -0.72
TOP1-201ENST00000361337 CALCOCO1Q9P1Z2 691 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 A0A0G2JLW4 131 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 ANKRD18BA2A2Z9 1011 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 NBPF26B4DH59 902 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 PSMA5P28066 241 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 ADD1P35611 737 aaKnown RBP10.58□□□□□ -0.72
TOP1-201ENST00000361337 GTF2A1P52655 376 aaPredicted RBP10.58□□□□□ -0.72
TOP1-201ENST00000361337 CCZ1BP86790 482 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 CCZ1P86791 482 aaPredicted RBP10.58□□□□□ -0.72
TOP1-201ENST00000361337 NBPF14Q5TI25 921 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 NBPF10Q6P3W6 841 aaKnown RBP10.58□□□□□ -0.72
TOP1-201ENST00000361337 FAM196AQ6ZSG2 479 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 NBPF15Q8N660 670 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 PLBD2Q8NHP8 589 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 ZNF652Q9Y2D9 606 aa10.58□□□□□ -0.72
TOP1-201ENST00000361337 CCDC69A6NI79 296 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 GUCY1B3Q02153 619 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 EPHA10Q5JZY3 1008 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 Q6ZUG5 572 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 NYAP1Q6ZVC0 841 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.57□□□□□ -0.72
TOP1-201ENST00000361337 RAB11FIP4Q86YS3 637 aa10.57□□□□□ -0.72
TOP1-201ENST00000361337 DHX40Q8IX18 779 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms