RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 R3HDMLQ9H3Y0 253 aa26.88■■□□□ 1.89
CD47-202ENST00000361309 PCDHAC2Q9Y5I4 1007 aa26.88■■□□□ 1.89
CD47-202ENST00000361309 LAMB1P07942 1786 aa26.87■■□□□ 1.89
CD47-202ENST00000361309 MTMR14Q8NCE2 650 aa26.87■■□□□ 1.89
CD47-202ENST00000361309 CFHR5Q9BXR6 569 aa26.87■■□□□ 1.89
CD47-202ENST00000361309 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.87■■□□□ 1.89
CD47-202ENST00000361309 F6X3S4 739 aa26.86■■□□□ 1.89
CD47-202ENST00000361309 F8W031 263 aaPredicted RBP26.86■■□□□ 1.89
CD47-202ENST00000361309 ZNF804AQ7Z570 1209 aa26.86■■□□□ 1.89
CD47-202ENST00000361309 SALL2Q9Y467 1007 aaPredicted RBP26.86■■□□□ 1.89
CD47-202ENST00000361309 SSC5DA1L4H1 1573 aa26.85■■□□□ 1.89
CD47-202ENST00000361309 FKTNO75072 461 aa26.85■■□□□ 1.89
CD47-202ENST00000361309 IL1R1P14778 569 aa26.85■■□□□ 1.89
CD47-202ENST00000361309 EXOSC9Q06265 439 aaKnown RBP26.85■■□□□ 1.89
CD47-202ENST00000361309 BEND3Q5T5X7 828 aa26.85■■□□□ 1.89
CD47-202ENST00000361309 SLC10A4Q96EP9 437 aa26.85■■□□□ 1.89
CD47-202ENST00000361309 CFAP100Q494V2 611 aa26.84■■□□□ 1.89
CD47-202ENST00000361309 FBXO46Q6PJ61 603 aaPredicted RBP26.84■■□□□ 1.89
CD47-202ENST00000361309 LMBR1LQ6UX01 489 aa26.84■■□□□ 1.89
CD47-202ENST00000361309 JAG2Q9Y219 1238 aa26.84■■□□□ 1.89
CD47-202ENST00000361309 CLRN2A0PK11 232 aa26.83■■□□□ 1.89
CD47-202ENST00000361309 MAP3K11Q16584 847 aa26.83■■□□□ 1.89
CD47-202ENST00000361309 WDR63Q8IWG1 891 aa26.83■■□□□ 1.89
CD47-202ENST00000361309 ZNF594Q96JF6 807 aaPredicted RBP26.83■■□□□ 1.89
CD47-202ENST00000361309 PRMT6Q96LA8 375 aaPredicted RBP26.83■■□□□ 1.89
CD47-202ENST00000361309 PPP2R3BQ9Y5P8 575 aa26.83■■□□□ 1.89
CD47-202ENST00000361309 SPDYE2BA6NHP3 402 aa26.82■■□□□ 1.88
CD47-202ENST00000361309 MANSC4A6NHS7 340 aaPredicted RBP26.82■■□□□ 1.88
CD47-202ENST00000361309 MYO1BO43795 1136 aa26.82■■□□□ 1.88
CD47-202ENST00000361309 PPP1R12BO60237 982 aaPredicted RBP26.82■■□□□ 1.88
CD47-202ENST00000361309 PLIN1O60240 522 aa26.82■■□□□ 1.88
CD47-202ENST00000361309 ALDH1A1P00352 501 aa26.82■■□□□ 1.88
CD47-202ENST00000361309 SPDYE6P0CI01 402 aa26.82■■□□□ 1.88
CD47-202ENST00000361309 FKBP1AP62942 108 aaKnown RBP26.82■■□□□ 1.88
CD47-202ENST00000361309 EPHA10Q5JZY3 1008 aa26.82■■□□□ 1.88
CD47-202ENST00000361309 CLMNQ96JQ2 1002 aa26.82■■□□□ 1.88
CD47-202ENST00000361309 CCDC57Q2TAC2 916 aa26.81■■□□□ 1.88
CD47-202ENST00000361309 TAF7LQ5H9L4 462 aa26.81■■□□□ 1.88
CD47-202ENST00000361309 VEZTQ9HBM0 779 aa26.81■■□□□ 1.88
CD47-202ENST00000361309 MRS2Q9HD23 443 aa26.81■■□□□ 1.88
CD47-202ENST00000361309 AOX1Q06278 1338 aa26.81■■□□□ 1.88
CD47-202ENST00000361309 INHBEP58166 350 aa26.8■■□□□ 1.88
CD47-202ENST00000361309 SUPT20HL1Q3ZLR7 823 aa26.8■■□□□ 1.88
CD47-202ENST00000361309 LDHAL6AQ6ZMR3 332 aa26.8■■□□□ 1.88
CD47-202ENST00000361309 IFNL1Q8IU54 200 aa26.8■■□□□ 1.88
CD47-202ENST00000361309 WNK4Q96J92 1243 aa26.8■■□□□ 1.88
CD47-202ENST00000361309 OTOFQ9HC10 1997 aa26.79■■□□□ 1.88
CD47-202ENST00000361309 ZBTB48P10074 688 aaPredicted RBP26.79■■□□□ 1.88
CD47-202ENST00000361309 RBM5P52756 815 aaKnown RBP eCLIP26.79■■□□□ 1.88
CD47-202ENST00000361309 NBPF12Q5TAG4 269 aaPredicted RBP26.79■■□□□ 1.88
CD47-202ENST00000361309 CNNM1Q9NRU3 951 aa26.79■■□□□ 1.88
CD47-202ENST00000361309 GRM8O00222 908 aa26.78■■□□□ 1.88
CD47-202ENST00000361309 PRPF38BQ5VTL8 546 aaKnown RBP26.78■■□□□ 1.88
CD47-202ENST00000361309 ARAP2Q8WZ64 1704 aa26.77■■□□□ 1.88
CD47-202ENST00000361309 SPINK5Q9NQ38 1064 aaPredicted RBP26.77■■□□□ 1.88
CD47-202ENST00000361309 HTTP42858 3142 aa26.77■■□□□ 1.88
CD47-202ENST00000361309 UNCXA6NJT0 531 aa26.76■■□□□ 1.87
CD47-202ENST00000361309 IGF2BP3O00425 579 aaKnown RBP eCLIP26.76■■□□□ 1.87
CD47-202ENST00000361309 C9orf78Q9NZ63 289 aaPredicted RBP26.76■■□□□ 1.87
CD47-202ENST00000361309 FAM205AQ6ZU69 1335 aa26.75■■□□□ 1.87
CD47-202ENST00000361309 USP2O75604 605 aaPredicted RBP26.75■■□□□ 1.87
CD47-202ENST00000361309 IREB2P48200 963 aaKnown RBP26.75■■□□□ 1.87
CD47-202ENST00000361309 RASA3Q14644 834 aa26.75■■□□□ 1.87
CD47-202ENST00000361309 TRIM17Q9Y577 477 aa26.74■■□□□ 1.87
CD47-202ENST00000361309 GJA5P36382 358 aa26.73■■□□□ 1.87
CD47-202ENST00000361309 MFSD14BQ5SR56 506 aa26.73■■□□□ 1.87
CD47-202ENST00000361309 SLC4A10Q6U841 1118 aa26.73■■□□□ 1.87
CD47-202ENST00000361309 TDRD7Q8NHU6 1098 aaKnown RBP26.73■■□□□ 1.87
CD47-202ENST00000361309 CENPFP49454 3210 aa26.73■■□□□ 1.87
CD47-202ENST00000361309 ALDH1L1O75891 902 aa26.72■■□□□ 1.87
CD47-202ENST00000361309 GYG1P46976 350 aa26.72■■□□□ 1.87
CD47-202ENST00000361309 UBE4AQ14139 1066 aa26.72■■□□□ 1.87
CD47-202ENST00000361309 OTOP1Q7RTM1 612 aa26.72■■□□□ 1.87
CD47-202ENST00000361309 ANKRD13AQ8IZ07 590 aa26.72■■□□□ 1.87
CD47-202ENST00000361309 ZNF70Q9UC06 446 aaPredicted RBP26.72■■□□□ 1.87
CD47-202ENST00000361309 TTF2Q9UNY4 1162 aaKnown RBP26.72■■□□□ 1.87
CD47-202ENST00000361309 HIBADHP31937 336 aaKnown RBP26.71■■□□□ 1.87
CD47-202ENST00000361309 PUS3Q9BZE2 481 aaKnown RBP26.71■■□□□ 1.87
CD47-202ENST00000361309 TDRD3Q9H7E2 651 aaKnown RBP26.71■■□□□ 1.87
CD47-202ENST00000361309 PCDH10Q9P2E7 1040 aa26.71■■□□□ 1.87
CD47-202ENST00000361309 SPDYE2Q495Y8 402 aa26.7■■□□□ 1.86
CD47-202ENST00000361309 SUCLG2Q96I99 432 aa26.7■■□□□ 1.86
CD47-202ENST00000361309 FAM84BQ96KN1 310 aaPredicted RBP26.7■■□□□ 1.86
CD47-202ENST00000361309 SRCIN1Q9C0H9 1055 aa26.7■■□□□ 1.86
CD47-202ENST00000361309 SERPINA10Q9UK55 444 aa26.7■■□□□ 1.86
CD47-202ENST00000361309 KIAA0100Q14667 2235 aaKnown RBP26.7■■□□□ 1.86
CD47-202ENST00000361309 CRHR2Q13324 411 aa26.69■■□□□ 1.86
CD47-202ENST00000361309 TNFAIP1Q13829 316 aa26.69■■□□□ 1.86
CD47-202ENST00000361309 OTUD7BQ6GQQ9 843 aa26.69■■□□□ 1.86
CD47-202ENST00000361309 KAZALD1Q96I82 304 aa26.69■■□□□ 1.86
CD47-202ENST00000361309 PTPN18Q99952 460 aa26.68■■□□□ 1.86
CD47-202ENST00000361309 ELP3Q9H9T3 547 aa26.68■■□□□ 1.86
CD47-202ENST00000361309 ANP32CO43423 234 aa26.67■■□□□ 1.86
CD47-202ENST00000361309 DZIP1LQ8IYY4 767 aaKnown RBP26.67■■□□□ 1.86
CD47-202ENST00000361309 CD99L2Q8TCZ2 262 aa26.67■■□□□ 1.86
CD47-202ENST00000361309 OPTNQ96CV9 577 aa26.67■■□□□ 1.86
CD47-202ENST00000361309 ERO1AQ96HE7 468 aa26.67■■□□□ 1.86
CD47-202ENST00000361309 MKI67P46013 3256 aaKnown RBP26.66■■□□□ 1.86
CD47-202ENST00000361309 RBBP6Q7Z6E9 1792 aaKnown RBP26.66■■□□□ 1.86
CD47-202ENST00000361309 TESPA1A2RU30 521 aaPredicted RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms