RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 XAB2Q9HCS7 855 aaKnown RBP19.45■□□□□ 0.7
CACNA1A-201ENST00000360228 MPRIPQ6WCQ1 1025 aa19.45■□□□□ 0.7
CACNA1A-201ENST00000360228 HVCN1Q96D96 273 aa19.45■□□□□ 0.7
CACNA1A-201ENST00000360228 CCDC94Q9BW85 323 aaPredicted RBP19.45■□□□□ 0.7
CACNA1A-201ENST00000360228 RBBP5Q15291 538 aaKnown RBP19.44■□□□□ 0.7
CACNA1A-201ENST00000360228 MCM10Q7L590 875 aa19.44■□□□□ 0.7
CACNA1A-201ENST00000360228 AFAP1L1Q8TED9 768 aa19.44■□□□□ 0.7
CACNA1A-201ENST00000360228 MARCKSP29966 332 aaPredicted RBP19.44■□□□□ 0.7
CACNA1A-201ENST00000360228 RTEL1-TNFRSF6BF6WH68 1400 aa19.44■□□□□ 0.7
CACNA1A-201ENST00000360228 SMIM24O75264 130 aa19.44■□□□□ 0.7
CACNA1A-201ENST00000360228 FAM69CQ0P6D2 419 aa19.44■□□□□ 0.7
CACNA1A-201ENST00000360228 TRPC3Q13507 836 aa19.44■□□□□ 0.7
CACNA1A-201ENST00000360228 ARHGAP24Q8N264 748 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 CSRNP2Q9H175 543 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 C6orf50Q9HD87 102 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 CCDC122Q5T0U0 273 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 SLC12A5Q9H2X9 1139 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 PTPRGP23470 1445 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 RNF34Q969K3 372 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 NEK1Q96PY6 1258 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 I3L4J1 428 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 NAA16Q6N069 864 aaPredicted RBP19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 FRMD4BQ9Y2L6 1034 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 SPDYE3A6NKU9 549 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 STK10O94804 968 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 RNF10Q8N5U6 811 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 ZBTB21Q9ULJ3 1066 aa19.43■□□□□ 0.7
CACNA1A-201ENST00000360228 DAPK3O43293 454 aa19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 FAM204AQ9H8W3 233 aa19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 TRIM6Q9C030 488 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 CNPY2Q9Y2B0 182 aa19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 RTL1A6NKG5 1358 aa19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 MAP2K2P36507 400 aa19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 CRNKL1Q9BZJ0 848 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 BANK1Q8NDB2 785 aa19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 GABPB2Q8TAK5 448 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 RNF8O76064 485 aa19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 SRGAP1Q7Z6B7 1085 aa19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 LEO1Q8WVC0 666 aaPredicted RBP19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 GBP5Q96PP8 586 aa19.42■□□□□ 0.7
CACNA1A-201ENST00000360228 IRX4P78413 519 aa19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 ECM2O94769 699 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 RAPGEF1Q13905 1077 aa19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 NBPF8Q3BBV2 869 aa19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 ALG1Q9BT22 464 aa19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 COG7P83436 770 aa19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 KIFAP3Q92845 792 aa19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 LMOD1P29536 600 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 TBC1D2Q9BYX2 928 aa19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 NAPAP54920 295 aa19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 MORC4Q8TE76 937 aa19.41■□□□□ 0.7
CACNA1A-201ENST00000360228 RTN1Q16799 776 aa19.4■□□□□ 0.7
CACNA1A-201ENST00000360228 BMP15O95972 392 aa19.4■□□□□ 0.7
CACNA1A-201ENST00000360228 HMG20BQ9P0W2 317 aa19.4■□□□□ 0.7
CACNA1A-201ENST00000360228 C11orf95C9JLR9 678 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-201ENST00000360228 NFE2L2Q16236 605 aa19.4■□□□□ 0.7
CACNA1A-201ENST00000360228 CFAP70Q5T0N1 1121 aa19.4■□□□□ 0.7
CACNA1A-201ENST00000360228 TAOK1Q7L7X3 1001 aa19.4■□□□□ 0.7
CACNA1A-201ENST00000360228 ERBINQ96RT1 1412 aa19.4■□□□□ 0.7
CACNA1A-201ENST00000360228 SPAG1Q07617 926 aa19.4■□□□□ 0.7
CACNA1A-201ENST00000360228 PPARDQ03181 441 aa19.4■□□□□ 0.7
CACNA1A-201ENST00000360228 RIOK3O14730 519 aaKnown RBP19.39■□□□□ 0.7
CACNA1A-201ENST00000360228 CASC4Q6P4E1 433 aa19.39■□□□□ 0.7
CACNA1A-201ENST00000360228 MRPL46Q9H2W6 279 aaKnown RBP19.39■□□□□ 0.7
CACNA1A-201ENST00000360228 LCA5Q86VQ0 697 aa19.39■□□□□ 0.7
CACNA1A-201ENST00000360228 GPTP24298 496 aa19.39■□□□□ 0.69
CACNA1A-201ENST00000360228 ZC3H6P61129 1189 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-201ENST00000360228 GSTO1P78417 241 aa19.39■□□□□ 0.69
CACNA1A-201ENST00000360228 SLC8A3P57103 927 aa19.39■□□□□ 0.69
CACNA1A-201ENST00000360228 ZBTB43O43298 467 aa19.39■□□□□ 0.69
CACNA1A-201ENST00000360228 KRT23Q9C075 422 aa19.39■□□□□ 0.69
CACNA1A-201ENST00000360228 SMARCC2Q8TAQ2 1214 aa19.39■□□□□ 0.69
CACNA1A-201ENST00000360228 GCKP35557 465 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 TMPOP42166 694 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 DHX58Q96C10 678 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 RILPQ96NA2 401 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 NDUFAB1O14561 156 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 PSPC1Q8WXF1 523 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 CDC5LQ99459 802 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 STX10O60499 249 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 PFDN1O60925 122 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 ZSCAN22P10073 491 aaPredicted RBP19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 INPP5BP32019 993 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 ARHGAP25P42331 645 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 KMT5BQ4FZB7 885 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 IGSF3O75054 1194 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 RILPL1Q5EBL4 403 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 TBC1D9Q6ZT07 1266 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 OPHN1O60890 802 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 MYCBPQ99417 103 aaPredicted RBP19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 HS2ST1Q7LGA3 356 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 CCDC186Q7Z3E2 898 aa19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 EIF2AQ9BY44 585 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-201ENST00000360228 TTLL3Q9Y4R7 772 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 SPOPO43791 374 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 TRIM68Q6AZZ1 485 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 MX2P20592 715 aa19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 BAG1Q99933 345 aaPredicted RBP19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 RNASE9P60153 205 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-201ENST00000360228 TAF7Q15545 349 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms