RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 APPBP2Q92624 585 aa16.17■□□□□ 0.18
CCDC197-201ENST00000359253 SLC4A3P48751 1232 aa16.16■□□□□ 0.18
CCDC197-201ENST00000359253 PTH1RQ03431 593 aa16.16■□□□□ 0.18
CCDC197-201ENST00000359253 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
CCDC197-201ENST00000359253 DENND2AQ9ULE3 1009 aa16.16■□□□□ 0.18
CCDC197-201ENST00000359253 RBM8AQ9Y5S9 174 aaKnown RBP16.16■□□□□ 0.18
CCDC197-201ENST00000359253 SNX14Q9Y5W7 946 aa16.16■□□□□ 0.18
CCDC197-201ENST00000359253 CYP2E1P05181 493 aaPredicted RBP16.15■□□□□ 0.18
CCDC197-201ENST00000359253 NEK4P51957 841 aa16.15■□□□□ 0.18
CCDC197-201ENST00000359253 MAP3K12Q12852 859 aa16.15■□□□□ 0.18
CCDC197-201ENST00000359253 SCARF1Q14162 830 aa16.15■□□□□ 0.18
CCDC197-201ENST00000359253 C15orf52Q6ZUT6 534 aaKnown RBP16.15■□□□□ 0.18
CCDC197-201ENST00000359253 FBXO33Q7Z6M2 555 aa16.15■□□□□ 0.18
CCDC197-201ENST00000359253 ANKRD31Q8N7Z5 1873 aa16.15■□□□□ 0.18
CCDC197-201ENST00000359253 ANTXR1Q9H6X2 564 aa16.15■□□□□ 0.18
CCDC197-201ENST00000359253 KIAA1551Q9HCM1 1747 aa16.15■□□□□ 0.18
CCDC197-201ENST00000359253 NDUFB9Q9Y6M9 179 aa16.15■□□□□ 0.18
CCDC197-201ENST00000359253 AKAP11Q9UKA4 1901 aa16.15■□□□□ 0.18
CCDC197-201ENST00000359253 ADD2P35612 726 aa16.14■□□□□ 0.17
CCDC197-201ENST00000359253 CREB3L3Q68CJ9 461 aa16.14■□□□□ 0.17
CCDC197-201ENST00000359253 PRPF40BQ6NWY9 871 aaKnown RBP16.14■□□□□ 0.17
CCDC197-201ENST00000359253 VPS37DQ86XT2 251 aa16.14■□□□□ 0.17
CCDC197-201ENST00000359253 TMX4Q9H1E5 349 aaPredicted RBP16.14■□□□□ 0.17
CCDC197-201ENST00000359253 CTNNA3Q9UI47 895 aa16.14■□□□□ 0.17
CCDC197-201ENST00000359253 PALD1Q9ULE6 856 aa16.14■□□□□ 0.17
CCDC197-201ENST00000359253 CIZ1Q9ULV3 898 aaPredicted RBP16.14■□□□□ 0.17
CCDC197-201ENST00000359253 TNRC6CQ9HCJ0 1690 aaKnown RBP16.14■□□□□ 0.17
CCDC197-201ENST00000359253 XDHP47989 1333 aa16.14■□□□□ 0.17
CCDC197-201ENST00000359253 A0A1B0GUL6 1792 aa16.13■□□□□ 0.17
CCDC197-201ENST00000359253 BCAMP50895 628 aa16.13■□□□□ 0.17
CCDC197-201ENST00000359253 RASGRF1Q13972 1273 aa16.13■□□□□ 0.17
CCDC197-201ENST00000359253 ZNF589Q86UQ0 364 aaPredicted RBP16.13■□□□□ 0.17
CCDC197-201ENST00000359253 RTKN2Q8IZC4 609 aa16.13■□□□□ 0.17
CCDC197-201ENST00000359253 SLC27A2O14975 620 aa16.12■□□□□ 0.17
CCDC197-201ENST00000359253 HSP90AA1P07900 732 aaKnown RBP16.12■□□□□ 0.17
CCDC197-201ENST00000359253 ATP2B4P23634 1241 aa16.12■□□□□ 0.17
CCDC197-201ENST00000359253 HIBADHP31937 336 aaKnown RBP16.12■□□□□ 0.17
CCDC197-201ENST00000359253 WASHC4Q2M389 1173 aa16.12■□□□□ 0.17
CCDC197-201ENST00000359253 SLC9C2Q5TAH2 1124 aa16.12■□□□□ 0.17
CCDC197-201ENST00000359253 ARHGAP27Q6ZUM4 889 aa16.12■□□□□ 0.17
CCDC197-201ENST00000359253 SP8Q8IXZ3 490 aa16.12■□□□□ 0.17
CCDC197-201ENST00000359253 FAM84BQ96KN1 310 aaPredicted RBP16.12■□□□□ 0.17
CCDC197-201ENST00000359253 ALDH8A1Q9H2A2 487 aaPredicted RBP16.12■□□□□ 0.17
CCDC197-201ENST00000359253 CWC22Q9HCG8 908 aaKnown RBP16.12■□□□□ 0.17
CCDC197-201ENST00000359253 ZSWIM6Q9HCJ5 1215 aa16.12■□□□□ 0.17
CCDC197-201ENST00000359253 MAST3O60307 1309 aa16.12■□□□□ 0.17
CCDC197-201ENST00000359253 BRCA1P38398 1863 aaKnown RBP16.12■□□□□ 0.17
CCDC197-201ENST00000359253 DLEC1Q9Y238 1755 aa16.11■□□□□ 0.17
CCDC197-201ENST00000359253 C21orf2O43822 256 aa16.11■□□□□ 0.17
CCDC197-201ENST00000359253 HMGB1P09429 215 aaKnown RBP16.11■□□□□ 0.17
CCDC197-201ENST00000359253 VPS53Q5VIR6 699 aa16.11■□□□□ 0.17
CCDC197-201ENST00000359253 OSBP2Q969R2 916 aa16.11■□□□□ 0.17
CCDC197-201ENST00000359253 PODXL2Q9NZ53 605 aa16.11■□□□□ 0.17
CCDC197-201ENST00000359253 CHMP5Q9NZZ3 219 aa16.11■□□□□ 0.17
CCDC197-201ENST00000359253 ANKIB1Q9P2G1 1089 aa16.11■□□□□ 0.17
CCDC197-201ENST00000359253 ATP6V0A2Q9Y487 856 aa16.11■□□□□ 0.17
CCDC197-201ENST00000359253 CYP46A1Q9Y6A2 500 aa16.11■□□□□ 0.17
CCDC197-201ENST00000359253 MYH7P12883 1935 aa16.1■□□□□ 0.17
CCDC197-201ENST00000359253 IDH1O75874 414 aaKnown RBP16.1■□□□□ 0.17
CCDC197-201ENST00000359253 HSPD1P10809 573 aaKnown RBP16.1■□□□□ 0.17
CCDC197-201ENST00000359253 ANKRD1Q15327 319 aa16.1■□□□□ 0.17
CCDC197-201ENST00000359253 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
CCDC197-201ENST00000359253 RASEFQ8IZ41 740 aa16.1■□□□□ 0.17
CCDC197-201ENST00000359253 ZGPATQ8N5A5 531 aaKnown RBP16.1■□□□□ 0.17
CCDC197-201ENST00000359253 SEC62Q99442 399 aaKnown RBP16.1■□□□□ 0.17
CCDC197-201ENST00000359253 VPS33BQ9H267 617 aa16.1■□□□□ 0.17
CCDC197-201ENST00000359253 PIH1D3Q9NQM4 214 aaKnown RBP16.1■□□□□ 0.17
CCDC197-201ENST00000359253 LTBP3Q9NS15 1303 aa16.1■□□□□ 0.17
CCDC197-201ENST00000359253 RPAP1Q9BWH6 1393 aaPredicted RBP16.1■□□□□ 0.17
CCDC197-201ENST00000359253 COL4A1P02462 1669 aa16.09■□□□□ 0.17
CCDC197-201ENST00000359253 SNAP23O00161 211 aa16.09■□□□□ 0.17
CCDC197-201ENST00000359253 CD2BP2O95400 341 aaKnown RBP16.09■□□□□ 0.17
CCDC197-201ENST00000359253 PDE6AP16499 860 aa16.09■□□□□ 0.17
CCDC197-201ENST00000359253 GNAT2P19087 354 aa16.09■□□□□ 0.17
CCDC197-201ENST00000359253 PI16Q6UXB8 463 aa16.09■□□□□ 0.17
CCDC197-201ENST00000359253 RUFY3Q7L099 469 aa16.09■□□□□ 0.17
CCDC197-201ENST00000359253 INTS4Q96HW7 963 aaKnown RBP16.09■□□□□ 0.17
CCDC197-201ENST00000359253 ZSCAN31Q96LW9 406 aaPredicted RBP16.09■□□□□ 0.17
CCDC197-201ENST00000359253 TTC14Q96N46 770 aa16.09■□□□□ 0.17
CCDC197-201ENST00000359253 WWC3Q9ULE0 1092 aa16.09■□□□□ 0.17
CCDC197-201ENST00000359253 DOCK2Q92608 1830 aa16.08■□□□□ 0.17
CCDC197-201ENST00000359253 ARFGEF1Q9Y6D6 1849 aa16.08■□□□□ 0.17
CCDC197-201ENST00000359253 TCRBV5S4A2TA0A5A2 114 aa16.08■□□□□ 0.16
CCDC197-201ENST00000359253 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
CCDC197-201ENST00000359253 GYG1P46976 350 aa16.08■□□□□ 0.16
CCDC197-201ENST00000359253 SPTY2D1Q68D10 685 aaPredicted RBP16.08■□□□□ 0.16
CCDC197-201ENST00000359253 ZNF804AQ7Z570 1209 aa16.08■□□□□ 0.16
CCDC197-201ENST00000359253 JAKMIP1Q96N16 626 aaKnown RBP16.08■□□□□ 0.16
CCDC197-201ENST00000359253 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.16
CCDC197-201ENST00000359253 ZMYM6O95789 1325 aa16.08■□□□□ 0.16
CCDC197-201ENST00000359253 ZNF532Q9HCE3 1301 aa16.08■□□□□ 0.16
CCDC197-201ENST00000359253 GOLGB1Q14789 3259 aaKnown RBP16.08■□□□□ 0.16
CCDC197-201ENST00000359253 M0R2C6 588 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 GPAA1O43292 621 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 FRAT2O75474 233 aaPredicted RBP16.07■□□□□ 0.16
CCDC197-201ENST00000359253 CASTP20810 708 aaKnown RBP16.07■□□□□ 0.16
CCDC197-201ENST00000359253 CUL4AQ13619 759 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 ALX1Q15699 326 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 BLOC1S2Q6QNY1 142 aa16.07■□□□□ 0.16
CCDC197-201ENST00000359253 CCDC129Q6ZRS4 1044 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms