RNA–Protein interactions for RNA: ENST00000358170.6

CD46-205, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,371 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-205ENST00000358170 SENP2Q9HC62 589 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.65□□□□□ -0.86
CD46-205ENST00000358170 PCDHA7Q9UN72 937 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 AKAP2Q9Y2D5 859 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 V9GYY5 206 aaPredicted RBP9.65□□□□□ -0.86
CD46-205ENST00000358170 WDR17Q8IZU2 1322 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 CHD2O14647 1828 aaKnown RBP9.65□□□□□ -0.86
CD46-205ENST00000358170 IRS4O14654 1257 aaPredicted RBP9.65□□□□□ -0.86
CD46-205ENST00000358170 FDPSP14324 419 aaKnown RBP9.65□□□□□ -0.86
CD46-205ENST00000358170 CBX1P83916 185 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 EXOSC10Q01780 885 aaKnown RBP9.65□□□□□ -0.86
CD46-205ENST00000358170 NAA30Q147X3 362 aaPredicted RBP9.65□□□□□ -0.86
CD46-205ENST00000358170 NKX2-3Q8TAU0 364 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 ACSBG1Q96GR2 724 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 SLAIN2Q9P270 581 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 CTNNA3Q9UI47 895 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 SH3TC1Q8TE82 1336 aa9.65□□□□□ -0.86
CD46-205ENST00000358170 MCAMP43121 646 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 PHKA1P46020 1223 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 NDUFA8P51970 172 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 NCOA7Q8NI08 942 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 ERVV-2B6SEH9 535 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 TNNT1P13805 278 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 MYRIPQ8NFW9 859 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 ZBTB1Q9Y2K1 713 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 ANKRD18BA2A2Z9 1011 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 CTDSPL2Q05D32 466 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 ZSCAN25Q6NSZ9 544 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 MIGA1Q8NAN2 632 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 SMARCC2Q8TAQ2 1214 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 AIDAQ96BJ3 306 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 TUBGCP6Q96RT7 1819 aa9.64□□□□□ -0.87
CD46-205ENST00000358170 LRRFIP1Q32MZ4 808 aaKnown RBP9.63□□□□□ -0.87
CD46-205ENST00000358170 CARMIL3Q8ND23 1372 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 NUP133Q8WUM0 1156 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 RCOR1Q9UKL0 485 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 WWC3Q9ULE0 1092 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 ZNF532Q9HCE3 1301 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 LMOD1P29536 600 aaPredicted RBP9.63□□□□□ -0.87
CD46-205ENST00000358170 STX1AQ16623 288 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 NAA16Q6N069 864 aaPredicted RBP9.63□□□□□ -0.87
CD46-205ENST00000358170 MRPS27Q92552 414 aaKnown RBP9.63□□□□□ -0.87
CD46-205ENST00000358170 APPBP2Q92624 585 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.63□□□□□ -0.871e-6■■□□□ 12.5
CD46-205ENST00000358170 PIH1D3Q9NQM4 214 aaKnown RBP9.63□□□□□ -0.87
CD46-205ENST00000358170 ABCF2Q9UG63 623 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 SPTLC2O15270 562 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 FAM160A1Q05DH4 1040 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 SLC4A8Q2Y0W8 1093 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 ILDR1Q86SU0 546 aaPredicted RBP9.63□□□□□ -0.87
CD46-205ENST00000358170 CEP57L1Q8IYX8 460 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 LLPHQ9BRT6 129 aaKnown RBP9.63□□□□□ -0.87
CD46-205ENST00000358170 ALG1Q9BT22 464 aa9.63□□□□□ -0.87
CD46-205ENST00000358170 MST1RQ04912 1400 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 KIF28PB7ZC32 967 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 IGSF3O75054 1194 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 SKILP12757 684 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 PDIA4P13667 645 aaKnown RBP9.62□□□□□ -0.87
CD46-205ENST00000358170 METAP2P50579 478 aaKnown RBP eCLIP9.62□□□□□ -0.87
CD46-205ENST00000358170 KCNQ4P56696 695 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 DPCR1Q3MIW9 517 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 MAGEB6Q8N7X4 407 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 TTLL11Q8NHH1 800 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 CLIC6Q96NY7 704 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 MPHOSPH8Q99549 860 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 ALDH8A1Q9H2A2 487 aaPredicted RBP9.62□□□□□ -0.87
CD46-205ENST00000358170 ARMT1Q9H993 441 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 LMO7Q8WWI1 1683 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 ZNF335Q9H4Z2 1342 aaPredicted RBP9.62□□□□□ -0.87
CD46-205ENST00000358170 hCG_1642624A0A1W2PR95 340 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 USP27XA6NNY8 438 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 MINDY4BA8MYZ0 360 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 DHX16O60231 1041 aaKnown RBP9.62□□□□□ -0.87
CD46-205ENST00000358170 ANTXR2P58335 489 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 BICDL1Q6ZP65 573 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 SMIM5Q71RC9 77 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 ZBTB38Q8NAP3 1195 aaPredicted RBP9.62□□□□□ -0.87
CD46-205ENST00000358170 ISCA1Q9BUE6 129 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 SLC26A6Q9BXS9 759 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 SEC31BQ9NQW1 1179 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 ATG3Q9NT62 314 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 ANO10Q9NW15 660 aa9.62□□□□□ -0.87
CD46-205ENST00000358170 PRKAB2O43741 272 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 SLC3A2P08195 630 aaKnown RBP9.61□□□□□ -0.87
CD46-205ENST00000358170 SNW1Q13573 536 aaKnown RBP9.61□□□□□ -0.87
CD46-205ENST00000358170 TMEM67Q5HYA8 995 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 PPP4R3BQ5MIZ7 849 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 CYB5R4Q7L1T6 521 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 TBC1D10CQ8IV04 446 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 PDILTQ8N807 584 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 ZNF274Q96GC6 653 aaPredicted RBP9.61□□□□□ -0.87
CD46-205ENST00000358170 TNS3Q68CZ2 1445 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 IFIT3O14879 490 aaKnown RBP9.61□□□□□ -0.87
CD46-205ENST00000358170 FOXP2O15409 715 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 TERF1P54274 439 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 CCDC102BQ68D86 513 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 NLRP10Q86W26 655 aa9.61□□□□□ -0.87
CD46-205ENST00000358170 DZIP3Q86Y13 1208 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms