RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 SLC4A10Q6U841 1118 aa12.95□□□□□ -0.34
LINC01560-201ENST00000357412 ZNF804AQ7Z570 1209 aa12.95□□□□□ -0.34
LINC01560-201ENST00000357412 DEFB129Q9H1M3 183 aa12.95□□□□□ -0.34
LINC01560-201ENST00000357412 JAG2Q9Y219 1238 aa12.95□□□□□ -0.34
LINC01560-201ENST00000357412 ZBTB22O15209 634 aa12.94□□□□□ -0.34
LINC01560-201ENST00000357412 PLIN1O60240 522 aa12.94□□□□□ -0.34
LINC01560-201ENST00000357412 NBPF7P0C2Y1 421 aaPredicted RBP12.94□□□□□ -0.34
LINC01560-201ENST00000357412 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
LINC01560-201ENST00000357412 TAF7LQ5H9L4 462 aa12.94□□□□□ -0.34
LINC01560-201ENST00000357412 LDLRAD1Q5T700 205 aa12.94□□□□□ -0.34
LINC01560-201ENST00000357412 PUS3Q9BZE2 481 aaKnown RBP12.94□□□□□ -0.34
LINC01560-201ENST00000357412 CNNM1Q9NRU3 951 aa12.94□□□□□ -0.34
LINC01560-201ENST00000357412 UTYO14607 1347 aa12.93□□□□□ -0.34
LINC01560-201ENST00000357412 AOX1Q06278 1338 aa12.93□□□□□ -0.34
LINC01560-201ENST00000357412 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
LINC01560-201ENST00000357412 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
LINC01560-201ENST00000357412 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
LINC01560-201ENST00000357412 TM4SF4P48230 202 aa12.93□□□□□ -0.34
LINC01560-201ENST00000357412 PRKG1Q13976 671 aa12.93□□□□□ -0.34
LINC01560-201ENST00000357412 CFAP100Q494V2 611 aa12.93□□□□□ -0.34
LINC01560-201ENST00000357412 ARMC9Q7Z3E5 817 aa12.93□□□□□ -0.34
LINC01560-201ENST00000357412 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
LINC01560-201ENST00000357412 PRMT6Q96LA8 375 aaPredicted RBP12.93□□□□□ -0.34
LINC01560-201ENST00000357412 TBC1D8O95759 1140 aa12.92□□□□□ -0.34
LINC01560-201ENST00000357412 MLLT1Q03111 559 aaPredicted RBP12.92□□□□□ -0.34
LINC01560-201ENST00000357412 MKRN3Q13064 507 aaKnown RBP12.92□□□□□ -0.34
LINC01560-201ENST00000357412 UBE4AQ14139 1066 aa12.92□□□□□ -0.34
LINC01560-201ENST00000357412 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
LINC01560-201ENST00000357412 RABL6Q3YEC7 729 aaPredicted RBP12.92□□□□□ -0.34
LINC01560-201ENST00000357412 TDRD7Q8NHU6 1098 aaKnown RBP12.92□□□□□ -0.34
LINC01560-201ENST00000357412 FAM84BQ96KN1 310 aaPredicted RBP12.92□□□□□ -0.34
LINC01560-201ENST00000357412 ANGEL1Q9UNK9 670 aaKnown RBP12.92□□□□□ -0.34
LINC01560-201ENST00000357412 FZD1Q9UP38 647 aa12.92□□□□□ -0.34
LINC01560-201ENST00000357412 RIPOR2Q9Y4F9 1068 aa12.92□□□□□ -0.34
LINC01560-201ENST00000357412 PPP2R3BQ9Y5P8 575 aa12.92□□□□□ -0.34
LINC01560-201ENST00000357412 FAM205AQ6ZU69 1335 aa12.91□□□□□ -0.34
LINC01560-201ENST00000357412 CLRN2A0PK11 232 aa12.91□□□□□ -0.34
LINC01560-201ENST00000357412 HIBADHP31937 336 aaKnown RBP12.91□□□□□ -0.34
LINC01560-201ENST00000357412 GYG1P46976 350 aa12.91□□□□□ -0.34
LINC01560-201ENST00000357412 SPRYD7Q5W111 196 aa12.91□□□□□ -0.34
LINC01560-201ENST00000357412 CTU1Q7Z7A3 348 aaKnown RBP12.91□□□□□ -0.34
LINC01560-201ENST00000357412 ANKRD44Q8N8A2 993 aa12.91□□□□□ -0.34
LINC01560-201ENST00000357412 BICC1Q9H694 974 aaKnown RBP12.91□□□□□ -0.34
LINC01560-201ENST00000357412 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
LINC01560-201ENST00000357412 E9PSI1 815 aa12.9□□□□□ -0.34
LINC01560-201ENST00000357412 MFSD14BQ5SR56 506 aa12.9□□□□□ -0.34
LINC01560-201ENST00000357412 ZNF296Q8WUU4 475 aaPredicted RBP12.9□□□□□ -0.34
LINC01560-201ENST00000357412 SSH1Q8WYL5 1049 aa12.9□□□□□ -0.34
LINC01560-201ENST00000357412 TRPM7Q96QT4 1865 aa12.9□□□□□ -0.34
LINC01560-201ENST00000357412 MROH5Q6ZUA9 1318 aa12.89□□□□□ -0.35
LINC01560-201ENST00000357412 MYO1BO43795 1136 aa12.89□□□□□ -0.35
LINC01560-201ENST00000357412 SREBF2Q12772 1141 aa12.89□□□□□ -0.35
LINC01560-201ENST00000357412 LRRC24Q50LG9 513 aa12.89□□□□□ -0.35
LINC01560-201ENST00000357412 NOM1Q5C9Z4 860 aaKnown RBP12.89□□□□□ -0.35
LINC01560-201ENST00000357412 FBXO33Q7Z6M2 555 aa12.89□□□□□ -0.35
LINC01560-201ENST00000357412 CFHR5Q9BXR6 569 aa12.89□□□□□ -0.35
LINC01560-201ENST00000357412 VEZTQ9HBM0 779 aa12.89□□□□□ -0.35
LINC01560-201ENST00000357412 PTPRCP08575 1304 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 GPR25O00155 361 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 PPP1R12BO60237 982 aaPredicted RBP12.88□□□□□ -0.35
LINC01560-201ENST00000357412 RBM5P52756 815 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC01560-201ENST00000357412 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 RASA3Q14644 834 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 SUPT20HL1Q3ZLR7 823 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 NBPF12Q5TAG4 269 aaPredicted RBP12.88□□□□□ -0.35
LINC01560-201ENST00000357412 VGLL2Q8N8G2 317 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 CLMNQ96JQ2 1002 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 USP44Q9H0E7 712 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 R3HDMLQ9H3Y0 253 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 TTF2Q9UNY4 1162 aaKnown RBP12.88□□□□□ -0.35
LINC01560-201ENST00000357412 COL1A1P02452 1464 aaPredicted RBP12.88□□□□□ -0.35
LINC01560-201ENST00000357412 PAPPA2Q9BXP8 1791 aa12.88□□□□□ -0.35
LINC01560-201ENST00000357412 SSC5DA1L4H1 1573 aa12.87□□□□□ -0.35
LINC01560-201ENST00000357412 UNCXA6NJT0 531 aa12.87□□□□□ -0.35
LINC01560-201ENST00000357412 USP2O75604 605 aaPredicted RBP12.87□□□□□ -0.35
LINC01560-201ENST00000357412 GRIK5Q16478 980 aa12.87□□□□□ -0.35
LINC01560-201ENST00000357412 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
LINC01560-201ENST00000357412 KLHDC4Q8TBB5 520 aa12.87□□□□□ -0.35
LINC01560-201ENST00000357412 SLC10A4Q96EP9 437 aa12.87□□□□□ -0.35
LINC01560-201ENST00000357412 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
LINC01560-201ENST00000357412 HPS5Q9UPZ3 1129 aa12.87□□□□□ -0.35
LINC01560-201ENST00000357412 MANSC4A6NHS7 340 aaPredicted RBP12.86□□□□□ -0.35
LINC01560-201ENST00000357412 PDE8BO95263 885 aa12.86□□□□□ -0.35
LINC01560-201ENST00000357412 ZBTB48P10074 688 aaPredicted RBP12.86□□□□□ -0.35
LINC01560-201ENST00000357412 CRKP46108 304 aa12.86□□□□□ -0.35
LINC01560-201ENST00000357412 SOX10P56693 466 aa12.86□□□□□ -0.35
LINC01560-201ENST00000357412 PKN2Q16513 984 aaKnown RBP12.86□□□□□ -0.35
LINC01560-201ENST00000357412 METTL24Q5JXM2 366 aa12.86□□□□□ -0.35
LINC01560-201ENST00000357412 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
LINC01560-201ENST00000357412 DZIP1LQ8IYY4 767 aaKnown RBP12.86□□□□□ -0.35
LINC01560-201ENST00000357412 CDCA7LQ96GN5 454 aa12.86□□□□□ -0.35
LINC01560-201ENST00000357412 WNK4Q96J92 1243 aa12.86□□□□□ -0.35
LINC01560-201ENST00000357412 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
LINC01560-201ENST00000357412 IGF2BP3O00425 579 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC01560-201ENST00000357412 ALDH1A1P00352 501 aa12.85□□□□□ -0.35
LINC01560-201ENST00000357412 GJA5P36382 358 aa12.85□□□□□ -0.35
LINC01560-201ENST00000357412 IREB2P48200 963 aaKnown RBP12.85□□□□□ -0.35
LINC01560-201ENST00000357412 RFX5P48382 616 aaPredicted RBP12.85□□□□□ -0.35
LINC01560-201ENST00000357412 BCAMP50895 628 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms