RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 RABL6Q3YEC7 729 aaPredicted RBP14.39□□□□□ -0.11
CDRT1-202ENST00000354433 METTL24Q5JXM2 366 aa14.39□□□□□ -0.11
CDRT1-202ENST00000354433 RGMBQ6NW40 437 aa14.39□□□□□ -0.11
CDRT1-202ENST00000354433 C15orf52Q6ZUT6 534 aaKnown RBP14.39□□□□□ -0.11
CDRT1-202ENST00000354433 VPS37DQ86XT2 251 aa14.39□□□□□ -0.11
CDRT1-202ENST00000354433 PRDM10Q9NQV6 1147 aa14.39□□□□□ -0.11
CDRT1-202ENST00000354433 NOB1Q9ULX3 412 aaKnown RBP14.39□□□□□ -0.11
CDRT1-202ENST00000354433 IRS2Q9Y4H2 1338 aa14.38□□□□□ -0.11
CDRT1-202ENST00000354433 HSPA8P11142 646 aaKnown RBP14.38□□□□□ -0.11
CDRT1-202ENST00000354433 ZNF157P51786 506 aaPredicted RBP14.38□□□□□ -0.11
CDRT1-202ENST00000354433 UBE4AQ14139 1066 aa14.38□□□□□ -0.11
CDRT1-202ENST00000354433 TTLL12Q14166 644 aaPredicted RBP14.38□□□□□ -0.11
CDRT1-202ENST00000354433 B4GALNT3Q6L9W6 998 aa14.38□□□□□ -0.11
CDRT1-202ENST00000354433 ANKRD44Q8N8A2 993 aa14.38□□□□□ -0.11
CDRT1-202ENST00000354433 KLHDC4Q8TBB5 520 aa14.38□□□□□ -0.11
CDRT1-202ENST00000354433 CRBNQ96SW2 442 aa14.38□□□□□ -0.11
CDRT1-202ENST00000354433 API5Q9BZZ5 524 aaKnown RBP14.38□□□□□ -0.11
CDRT1-202ENST00000354433 USP44Q9H0E7 712 aa14.38□□□□□ -0.11
CDRT1-202ENST00000354433 UBTFL1P0CB47 393 aaPredicted RBP14.37□□□□□ -0.11
CDRT1-202ENST00000354433 IL1R1P14778 569 aa14.37□□□□□ -0.11
CDRT1-202ENST00000354433 GYG1P46976 350 aa14.37□□□□□ -0.11
CDRT1-202ENST00000354433 MMP14P50281 582 aa14.37□□□□□ -0.11
CDRT1-202ENST00000354433 DLGAP5Q15398 846 aa14.37□□□□□ -0.11
CDRT1-202ENST00000354433 LRRC24Q50LG9 513 aa14.37□□□□□ -0.11
CDRT1-202ENST00000354433 TSKSQ9UJT2 592 aa14.37□□□□□ -0.11
CDRT1-202ENST00000354433 KIF16BQ96L93 1317 aa14.36□□□□□ -0.11
CDRT1-202ENST00000354433 FRAT2O75474 233 aaPredicted RBP14.36□□□□□ -0.11
CDRT1-202ENST00000354433 MS4A1P11836 297 aa14.36□□□□□ -0.11
CDRT1-202ENST00000354433 HIBADHP31937 336 aaKnown RBP14.36□□□□□ -0.11
CDRT1-202ENST00000354433 NF2P35240 595 aa14.36□□□□□ -0.11
CDRT1-202ENST00000354433 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
CDRT1-202ENST00000354433 BRPF1P55201 1214 aaPredicted RBP14.36□□□□□ -0.11
CDRT1-202ENST00000354433 AAMPQ13685 434 aa14.36□□□□□ -0.11
CDRT1-202ENST00000354433 PRAMEF18Q5VWM3 479 aa14.36□□□□□ -0.11
CDRT1-202ENST00000354433 APOBEC3FQ8IUX4 373 aaKnown RBP14.36□□□□□ -0.11
CDRT1-202ENST00000354433 CERS5Q8N5B7 392 aa14.36□□□□□ -0.11
CDRT1-202ENST00000354433 ZNF646O15015 1829 aaPredicted RBP14.35□□□□□ -0.11
CDRT1-202ENST00000354433 MYO1BO43795 1136 aa14.35□□□□□ -0.11
CDRT1-202ENST00000354433 CCDC102AQ96A19 550 aa14.35□□□□□ -0.11
CDRT1-202ENST00000354433 RIPOR2Q9Y4F9 1068 aa14.35□□□□□ -0.11
CDRT1-202ENST00000354433 FKBP1BP68106 108 aa14.34□□□□□ -0.11
CDRT1-202ENST00000354433 CFAP100Q494V2 611 aa14.34□□□□□ -0.11
CDRT1-202ENST00000354433 CAVIN4Q5BKX8 364 aa14.34□□□□□ -0.11
CDRT1-202ENST00000354433 MFSD14BQ5SR56 506 aa14.34□□□□□ -0.11
CDRT1-202ENST00000354433 C20orf194Q5TEA3 1177 aa14.34□□□□□ -0.11
CDRT1-202ENST00000354433 IQSEC3Q9UPP2 1182 aaPredicted RBP14.34□□□□□ -0.11
CDRT1-202ENST00000354433 CA12O43570 354 aa14.34□□□□□ -0.11
CDRT1-202ENST00000354433 CHAF1AQ13111 956 aaPredicted RBP14.34□□□□□ -0.11
CDRT1-202ENST00000354433 PRKG1Q13976 671 aa14.34□□□□□ -0.11
CDRT1-202ENST00000354433 FAM84BQ96KN1 310 aaPredicted RBP14.34□□□□□ -0.11
CDRT1-202ENST00000354433 ZIC5Q96T25 663 aa14.34□□□□□ -0.11
CDRT1-202ENST00000354433 VEZTQ9HBM0 779 aa14.34□□□□□ -0.11
CDRT1-202ENST00000354433 PAPPA2Q9BXP8 1791 aa14.33□□□□□ -0.11
CDRT1-202ENST00000354433 POLR2AP24928 1970 aaKnown RBP14.33□□□□□ -0.12
CDRT1-202ENST00000354433 CLRN2A0PK11 232 aa14.33□□□□□ -0.12
CDRT1-202ENST00000354433 PDE8BO95263 885 aa14.33□□□□□ -0.12
CDRT1-202ENST00000354433 FKBP1AP62942 108 aaKnown RBP14.33□□□□□ -0.12
CDRT1-202ENST00000354433 MOB2Q70IA6 237 aa14.33□□□□□ -0.12
CDRT1-202ENST00000354433 SIL1Q9H173 461 aa14.33□□□□□ -0.12
CDRT1-202ENST00000354433 TTF2Q9UNY4 1162 aaKnown RBP14.33□□□□□ -0.12
CDRT1-202ENST00000354433 FAM155AB1AL88 458 aaPredicted RBP14.32□□□□□ -0.12
CDRT1-202ENST00000354433 SLC10A3P09131 477 aa14.32□□□□□ -0.12
CDRT1-202ENST00000354433 IFIT1P09914 478 aaKnown RBP14.32□□□□□ -0.12
CDRT1-202ENST00000354433 KIF23Q02241 960 aaPredicted RBP14.32□□□□□ -0.12
CDRT1-202ENST00000354433 PUM3Q15397 648 aaKnown RBP14.32□□□□□ -0.12
CDRT1-202ENST00000354433 TDRD7Q8NHU6 1098 aaKnown RBP14.32□□□□□ -0.12
CDRT1-202ENST00000354433 FRAT1Q92837 279 aaPredicted RBP14.32□□□□□ -0.12
CDRT1-202ENST00000354433 HDAC5Q9UQL6 1122 aa14.32□□□□□ -0.12
CDRT1-202ENST00000354433 PCDHAC2Q9Y5I4 1007 aa14.32□□□□□ -0.12
CDRT1-202ENST00000354433 LRRFIP2Q9Y608 721 aaKnown RBP14.32□□□□□ -0.12
CDRT1-202ENST00000354433 SPDYE2BA6NHP3 402 aa14.31□□□□□ -0.12
CDRT1-202ENST00000354433 UBE2Q2LH0YL09 131 aa14.31□□□□□ -0.12
CDRT1-202ENST00000354433 EYA2O00167 538 aa14.31□□□□□ -0.12
CDRT1-202ENST00000354433 SPDYE6P0CI01 402 aa14.31□□□□□ -0.12
CDRT1-202ENST00000354433 ZKSCAN2Q63HK3 967 aa14.31□□□□□ -0.12
CDRT1-202ENST00000354433 RASAL3Q86YV0 1011 aa14.31□□□□□ -0.12
CDRT1-202ENST00000354433 VGLL2Q8N8G2 317 aa14.31□□□□□ -0.12
CDRT1-202ENST00000354433 ZBED3Q96IU2 234 aaPredicted RBP14.31□□□□□ -0.12
CDRT1-202ENST00000354433 MEIS3Q99687 375 aa14.31□□□□□ -0.12
CDRT1-202ENST00000354433 FAM205AQ6ZU69 1335 aa14.31□□□□□ -0.12
CDRT1-202ENST00000354433 SLC5A1P13866 664 aa14.3□□□□□ -0.12
CDRT1-202ENST00000354433 ARMC9Q7Z3E5 817 aa14.3□□□□□ -0.12
CDRT1-202ENST00000354433 MTMR14Q8NCE2 650 aa14.3□□□□□ -0.12
CDRT1-202ENST00000354433 DEFB129Q9H1M3 183 aa14.3□□□□□ -0.12
CDRT1-202ENST00000354433 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.3□□□□□ -0.12
CDRT1-202ENST00000354433 COL1A1P02452 1464 aaPredicted RBP14.3□□□□□ -0.12
CDRT1-202ENST00000354433 IPO8O15397 1037 aaKnown RBP14.3□□□□□ -0.12
CDRT1-202ENST00000354433 RFX5P48382 616 aaPredicted RBP14.3□□□□□ -0.12
CDRT1-202ENST00000354433 PTPN12Q05209 780 aaKnown RBP14.3□□□□□ -0.12
CDRT1-202ENST00000354433 PRMT6Q96LA8 375 aaPredicted RBP14.3□□□□□ -0.12
CDRT1-202ENST00000354433 BCAMP50895 628 aa14.29□□□□□ -0.12
CDRT1-202ENST00000354433 MKRN3Q13064 507 aaKnown RBP14.29□□□□□ -0.12
CDRT1-202ENST00000354433 FBXO33Q7Z6M2 555 aa14.29□□□□□ -0.12
CDRT1-202ENST00000354433 TBC1D22AQ8WUA7 517 aa14.29□□□□□ -0.12
CDRT1-202ENST00000354433 LPIN2Q92539 896 aa14.29□□□□□ -0.12
CDRT1-202ENST00000354433 ARHGAP45Q92619 1136 aa14.29□□□□□ -0.12
CDRT1-202ENST00000354433 ANGEL1Q9UNK9 670 aaKnown RBP14.29□□□□□ -0.12
CDRT1-202ENST00000354433 CLUAP1Q96AJ1 413 aa14.28□□□□□ -0.12
CDRT1-202ENST00000354433 SERPINA10Q9UK55 444 aa14.28□□□□□ -0.12
CDRT1-202ENST00000354433 FZD1Q9UP38 647 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms