RNA–Protein interactions for RNA: ENST00000346991.9

KNL1-201, Transcript of kinetochore scaffold 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KNL1, Length 9,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-201ENST00000346991 IPO11Q9UI26 975 aaKnown RBP8.17□□□□□ -1.1
KNL1-201ENST00000346991 TPCN1Q9ULQ1 816 aa8.17□□□□□ -1.1
KNL1-201ENST00000346991 EXOC7Q9UPT5 735 aa8.17□□□□□ -1.1
KNL1-201ENST00000346991 NOP56O00567 594 aaKnown RBP8.17□□□□□ -1.1
KNL1-201ENST00000346991 EXOSC9Q06265 439 aaKnown RBP8.17□□□□□ -1.1
KNL1-201ENST00000346991 NAA25Q14CX7 972 aa8.17□□□□□ -1.1
KNL1-201ENST00000346991 SETD1BQ9UPS6 1966 aaKnown RBP8.17□□□□□ -1.1
KNL1-201ENST00000346991 STRN3Q13033 797 aa8.17□□□□□ -1.1
KNL1-201ENST00000346991 PDCD2Q16342 344 aaPredicted RBP8.17□□□□□ -1.1
KNL1-201ENST00000346991 SLC52A1Q9NWF4 448 aa8.17□□□□□ -1.1
KNL1-201ENST00000346991 ATP2C2O75185 946 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 ZBTB17Q13105 803 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 VWA3BQ502W6 1294 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 HEATR3Q7Z4Q2 680 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 GOLGA8QA0A0J9YX86 632 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 GOLGA8OA6NCC3 632 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 A6NNZ2 444 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 GOLGA8NF8WBI6 632 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 ACTN4O43707 911 aaKnown RBP8.16□□□□□ -1.1
KNL1-201ENST00000346991 EPB41P11171 864 aaKnown RBP8.16□□□□□ -1.1
KNL1-201ENST00000346991 GNA11P29992 359 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 TUBB8Q3ZCM7 444 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 DUSP27Q5VZP5 1158 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 PRPF38AQ8NAV1 312 aaKnown RBP8.16□□□□□ -1.1
KNL1-201ENST00000346991 KRT5P13647 590 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 DIXDC1Q155Q3 683 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 MPRIPQ6WCQ1 1025 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 PPME1Q9Y570 386 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 PTPRCP08575 1304 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 FAM135AQ9P2D6 1515 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 NAPAP54920 295 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 PPP1R21Q6ZMI0 780 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 KCNG4Q8TDN1 519 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 CCDC124Q96CT7 223 aaKnown RBP8.16□□□□□ -1.1
KNL1-201ENST00000346991 TSPYL2Q9H2G4 693 aaPredicted RBP8.16□□□□□ -1.1
KNL1-201ENST00000346991 HECW1Q76N89 1606 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 F8W8V4 182 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 ASIC1P78348 528 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 LIMCH1Q9UPQ0 1083 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 PTCD1O75127 700 aaKnown RBP8.16□□□□□ -1.1
KNL1-201ENST00000346991 GIGYF1O75420 1035 aaPredicted RBP8.16□□□□□ -1.1
KNL1-201ENST00000346991 PPP1R2P41236 205 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 YWHAEP62258 255 aaKnown RBP8.16□□□□□ -1.1
KNL1-201ENST00000346991 MCM6Q14566 821 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 KIF22Q14807 665 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 UAP1Q16222 522 aaPredicted RBP8.16□□□□□ -1.1
KNL1-201ENST00000346991 SETDB2Q96T68 719 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 KCNG1Q9UIX4 513 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 TOP2AP11388 1531 aaKnown RBP8.16□□□□□ -1.1
KNL1-201ENST00000346991 EBAG9O00559 213 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 SYKP43405 635 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 CCDC25Q86WR0 208 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 IFT81Q8WYA0 676 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 CAPZA3Q96KX2 299 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 ORC6Q9Y5N6 252 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 CAMSAP2Q08AD1 1489 aa8.16□□□□□ -1.1
KNL1-201ENST00000346991 GNG11P61952 73 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 PRPF40BQ6NWY9 871 aaKnown RBP8.15□□□□□ -1.1
KNL1-201ENST00000346991 B4GALNT4Q76KP1 1039 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 MCUR1Q96AQ8 359 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 GLT8D2Q9H1C3 349 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 PPFIA1Q13136 1202 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 MYD88Q99836 296 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 SLC26A6Q9BXS9 759 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 RRAGBQ5VZM2 374 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 PPP4R1Q8TF05 950 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 EYA3Q99504 573 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 UTP11Q9Y3A2 253 aaKnown RBP8.15□□□□□ -1.1
KNL1-201ENST00000346991 ESPNB1AK53 854 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 TRIM56Q9BRZ2 755 aaKnown RBP8.15□□□□□ -1.1
KNL1-201ENST00000346991 GNAT2P19087 354 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 DNM2P50570 870 aa8.15□□□□□ -1.1
KNL1-201ENST00000346991 SND1Q7KZF4 910 aaKnown RBP eCLIP8.15□□□□□ -1.1
KNL1-201ENST00000346991 KRT10P13645 584 aa8.15□□□□□ -1.11
KNL1-201ENST00000346991 PPFIA3O75145 1194 aa8.15□□□□□ -1.11
KNL1-201ENST00000346991 UBASH3AP57075 661 aa8.15□□□□□ -1.11
KNL1-201ENST00000346991 RBBP5Q15291 538 aaKnown RBP8.15□□□□□ -1.11
KNL1-201ENST00000346991 SLC4A8Q2Y0W8 1093 aa8.15□□□□□ -1.11
KNL1-201ENST00000346991 MICU3Q86XE3 530 aa8.15□□□□□ -1.11
KNL1-201ENST00000346991 AMOTL2Q9Y2J4 779 aa8.15□□□□□ -1.11
KNL1-201ENST00000346991 HNRNPCL2B2RXH8 293 aa8.15□□□□□ -1.11
KNL1-201ENST00000346991 MAP3K7O43318 606 aa8.15□□□□□ -1.11
KNL1-201ENST00000346991 HNRNPCL1O60812 293 aaKnown RBP8.15□□□□□ -1.11
KNL1-201ENST00000346991 CEP57Q86XR8 500 aa8.15□□□□□ -1.11
KNL1-201ENST00000346991 BOLA2Q9H3K6 86 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 VEZTQ9HBM0 779 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 CCPG1Q9ULG6 757 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 HFM1A2PYH4 1435 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 HSPA8P11142 646 aaKnown RBP8.14□□□□□ -1.11
KNL1-201ENST00000346991 NUCB1Q02818 461 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 PPP2R5DQ14738 602 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 RTN1Q16799 776 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 KRT79Q5XKE5 535 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 NAA16Q6N069 864 aaPredicted RBP8.14□□□□□ -1.11
KNL1-201ENST00000346991 TEKT1Q969V4 418 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 IRAK4Q9NWZ3 460 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 RASSF2P50749 326 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 BIRC3Q13489 604 aa8.14□□□□□ -1.11
KNL1-201ENST00000346991 TAF7Q15545 349 aaPredicted RBP8.14□□□□□ -1.11
KNL1-201ENST00000346991 CERS3Q8IU89 383 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms