RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 MYO1BO43795 1136 aa19.56■□□□□ 0.72
TSPAN4-201ENST00000346501 EGFRP00533 1210 aa19.56■□□□□ 0.72
TSPAN4-201ENST00000346501 DLGAP5Q15398 846 aa19.56■□□□□ 0.72
TSPAN4-201ENST00000346501 ATP2B3Q16720 1220 aa19.56■□□□□ 0.72
TSPAN4-201ENST00000346501 DEFB115Q30KQ5 88 aa19.56■□□□□ 0.72
TSPAN4-201ENST00000346501 PAXIP1Q6ZW49 1069 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-201ENST00000346501 TBC1D22AQ8WUA7 517 aa19.56■□□□□ 0.72
TSPAN4-201ENST00000346501 A0A1B0GUL6 1792 aa19.56■□□□□ 0.72
TSPAN4-201ENST00000346501 FAM205AQ6ZU69 1335 aa19.55■□□□□ 0.72
TSPAN4-201ENST00000346501 PITPNM2Q9BZ72 1349 aa19.55■□□□□ 0.72
TSPAN4-201ENST00000346501 G3BP1Q13283 466 aaKnown RBP eCLIP19.55■□□□□ 0.72
TSPAN4-201ENST00000346501 MFSD14BQ5SR56 506 aa19.55■□□□□ 0.72
TSPAN4-201ENST00000346501 ANGEL2Q5VTE6 544 aaKnown RBP19.55■□□□□ 0.72
TSPAN4-201ENST00000346501 FBXO33Q7Z6M2 555 aa19.55■□□□□ 0.72
TSPAN4-201ENST00000346501 AKAP2Q9Y2D5 859 aa19.55■□□□□ 0.72
TSPAN4-201ENST00000346501 F8W031 263 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-201ENST00000346501 ECE1P42892 770 aa19.54■□□□□ 0.72
TSPAN4-201ENST00000346501 RBM5P52756 815 aaKnown RBP eCLIP19.54■□□□□ 0.72
TSPAN4-201ENST00000346501 CHAF1AQ13111 956 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-201ENST00000346501 ATG9AQ7Z3C6 839 aa19.54■□□□□ 0.72
TSPAN4-201ENST00000346501 PA2G4Q9UQ80 394 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-201ENST00000346501 CNTNAP1P78357 1384 aa19.54■□□□□ 0.72
TSPAN4-201ENST00000346501 FGFR2P21802 821 aa19.53■□□□□ 0.72
TSPAN4-201ENST00000346501 C2orf69Q8N8R5 385 aa19.53■□□□□ 0.72
TSPAN4-201ENST00000346501 JMYQ8N9B5 988 aa19.53■□□□□ 0.72
TSPAN4-201ENST00000346501 JAG2Q9Y219 1238 aa19.53■□□□□ 0.72
TSPAN4-201ENST00000346501 RASSF10A6NK89 507 aa19.52■□□□□ 0.72
TSPAN4-201ENST00000346501 WNT10BO00744 389 aa19.52■□□□□ 0.72
TSPAN4-201ENST00000346501 NF2P35240 595 aa19.52■□□□□ 0.72
TSPAN4-201ENST00000346501 BCAMP50895 628 aa19.52■□□□□ 0.72
TSPAN4-201ENST00000346501 OS9Q13438 667 aaPredicted RBP19.52■□□□□ 0.72
TSPAN4-201ENST00000346501 APOBEC3FQ8IUX4 373 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-201ENST00000346501 IQSEC3Q9UPP2 1182 aaPredicted RBP19.52■□□□□ 0.72
TSPAN4-201ENST00000346501 TRPM7Q96QT4 1865 aa19.52■□□□□ 0.71
TSPAN4-201ENST00000346501 ADM5C9JUS6 153 aa19.51■□□□□ 0.71
TSPAN4-201ENST00000346501 FMR1Q06787 632 aaKnown RBP eCLIP19.51■□□□□ 0.71
TSPAN4-201ENST00000346501 NBPF9Q3BBW0 867 aa19.51■□□□□ 0.71
TSPAN4-201ENST00000346501 CST9Q5W186 159 aa19.51■□□□□ 0.71
TSPAN4-201ENST00000346501 TTF2Q9UNY4 1162 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-201ENST00000346501 TLL2Q9Y6L7 1015 aa19.51■□□□□ 0.71
TSPAN4-201ENST00000346501 MAST3O60307 1309 aa19.51■□□□□ 0.71
TSPAN4-201ENST00000346501 ZBTB7BO15156 539 aaPredicted RBP19.5■□□□□ 0.71
TSPAN4-201ENST00000346501 RLBP1P12271 317 aa19.5■□□□□ 0.71
TSPAN4-201ENST00000346501 ATP8B2P98198 1209 aa19.5■□□□□ 0.71
TSPAN4-201ENST00000346501 CERS5Q8N5B7 392 aa19.5■□□□□ 0.71
TSPAN4-201ENST00000346501 WDR66Q8TBY9 1149 aa19.5■□□□□ 0.71
TSPAN4-201ENST00000346501 PANK1Q8TE04 598 aa19.5■□□□□ 0.71
TSPAN4-201ENST00000346501 DDX19BQ9UMR2 479 aa19.5■□□□□ 0.71
TSPAN4-201ENST00000346501 CFAP100Q494V2 611 aa19.49■□□□□ 0.71
TSPAN4-201ENST00000346501 GORABQ5T7V8 394 aa19.49■□□□□ 0.71
TSPAN4-201ENST00000346501 MTMR14Q8NCE2 650 aa19.49■□□□□ 0.71
TSPAN4-201ENST00000346501 GBA2Q9HCG7 927 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-201ENST00000346501 SUGT1Q9Y2Z0 365 aa19.49■□□□□ 0.71
TSPAN4-201ENST00000346501 PNMA6EA0A0J9YXQ4 647 aa19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 SEMA3EO15041 775 aa19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 VEGFBP49765 207 aa19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 GRM1Q13255 1194 aa19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 MVPQ14764 893 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 SAPCD2Q86UD0 394 aa19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 CDCA5Q96FF9 252 aa19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 HHIPL1Q96JK4 782 aa19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 NEUROD6Q96NK8 337 aa19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 SERPINA10Q9UK55 444 aa19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 ASTN2O75129 1339 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-201ENST00000346501 HUNKP57058 714 aa19.47■□□□□ 0.71
TSPAN4-201ENST00000346501 TFCP2Q12800 502 aa19.47■□□□□ 0.71
TSPAN4-201ENST00000346501 C1orf115Q9H7X2 142 aa19.47■□□□□ 0.71
TSPAN4-201ENST00000346501 DENND2AQ9ULE3 1009 aa19.47■□□□□ 0.71
TSPAN4-201ENST00000346501 WDR33Q9C0J8 1336 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-201ENST00000346501 POLR2AP24928 1970 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 A0A1B0GUL7 405 aa19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 SPDYE2BA6NHP3 402 aa19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 SURF6O75683 361 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 SPDYE6P0CI01 402 aa19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 FKBP1BP68106 108 aa19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 TNFAIP1Q13829 316 aa19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 ZGPATQ8N5A5 531 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 SSH3Q8TE77 659 aa19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 AIDAQ96BJ3 306 aa19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 CAPNS2Q96L46 248 aa19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 YTHDC1Q96MU7 727 aaKnown RBP19.46■□□□□ 0.71
TSPAN4-201ENST00000346501 TIMM10P62072 90 aa19.45■□□□□ 0.7
TSPAN4-201ENST00000346501 HDLBPQ00341 1268 aaKnown RBP19.45■□□□□ 0.7
TSPAN4-201ENST00000346501 TTLL12Q14166 644 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-201ENST00000346501 TEKT1Q969V4 418 aa19.45■□□□□ 0.7
TSPAN4-201ENST00000346501 BEGAINQ9BUH8 593 aa19.45■□□□□ 0.7
TSPAN4-201ENST00000346501 VEZTQ9HBM0 779 aa19.45■□□□□ 0.7
TSPAN4-201ENST00000346501 COG6Q9Y2V7 657 aa19.45■□□□□ 0.7
TSPAN4-201ENST00000346501 PPP2R3BQ9Y5P8 575 aa19.45■□□□□ 0.7
TSPAN4-201ENST00000346501 HMMRO75330 724 aa19.44■□□□□ 0.7
TSPAN4-201ENST00000346501 MAP2K1Q02750 393 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-201ENST00000346501 POLA2Q14181 598 aa19.44■□□□□ 0.7
TSPAN4-201ENST00000346501 PDE3AQ14432 1141 aa19.44■□□□□ 0.7
TSPAN4-201ENST00000346501 HSP90AB4PQ58FF6 505 aa19.44■□□□□ 0.7
TSPAN4-201ENST00000346501 CCDC102BQ68D86 513 aa19.44■□□□□ 0.7
TSPAN4-201ENST00000346501 TMOD2Q9NZR1 351 aa19.44■□□□□ 0.7
TSPAN4-201ENST00000346501 CRKP46108 304 aa19.43■□□□□ 0.7
TSPAN4-201ENST00000346501 TNNI2P48788 182 aa19.43■□□□□ 0.7
TSPAN4-201ENST00000346501 CYP4F22Q6NT55 531 aa19.43■□□□□ 0.7
TSPAN4-201ENST00000346501 ERC1Q8IUD2 1116 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms