RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TTLL12Q14166 644 aaPredicted RBP15.66■□□□□ 0.1
SGCA-202ENST00000344627 EPHA10Q5JZY3 1008 aa15.66■□□□□ 0.1
SGCA-202ENST00000344627 LDHAL6AQ6ZMR3 332 aa15.66■□□□□ 0.1
SGCA-202ENST00000344627 ZNF804AQ7Z570 1209 aa15.66■□□□□ 0.1
SGCA-202ENST00000344627 SNAP23O00161 211 aa15.65■□□□□ 0.1
SGCA-202ENST00000344627 IL1R1P14778 569 aa15.65■□□□□ 0.1
SGCA-202ENST00000344627 GTF2IP78347 998 aa15.65■□□□□ 0.1
SGCA-202ENST00000344627 DLGAP5Q15398 846 aa15.65■□□□□ 0.1
SGCA-202ENST00000344627 CDCA7LQ96GN5 454 aa15.65■□□□□ 0.1
SGCA-202ENST00000344627 ZBED3Q96IU2 234 aaPredicted RBP15.65■□□□□ 0.1
SGCA-202ENST00000344627 PPP1R12BO60237 982 aaPredicted RBP15.64■□□□□ 0.09
SGCA-202ENST00000344627 MAP3K11Q16584 847 aa15.64■□□□□ 0.09
SGCA-202ENST00000344627 SUPT20HL1Q3ZLR7 823 aa15.64■□□□□ 0.09
SGCA-202ENST00000344627 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
SGCA-202ENST00000344627 SUCLG2Q96I99 432 aa15.64■□□□□ 0.09
SGCA-202ENST00000344627 UBE2Q2LH0YL09 131 aa15.63■□□□□ 0.09
SGCA-202ENST00000344627 LDLRAD1Q5T700 205 aa15.63■□□□□ 0.09
SGCA-202ENST00000344627 KIAA0825Q8IV33 1275 aa15.63■□□□□ 0.09
SGCA-202ENST00000344627 SMC4Q9NTJ3 1288 aa15.63■□□□□ 0.09
SGCA-202ENST00000344627 SCAF8Q9UPN6 1271 aaKnown RBP15.63■□□□□ 0.09
SGCA-202ENST00000344627 PTPRCP08575 1304 aa15.63■□□□□ 0.09
SGCA-202ENST00000344627 MANSC4A6NHS7 340 aaPredicted RBP15.62■□□□□ 0.09
SGCA-202ENST00000344627 NBPF7P0C2Y1 421 aaPredicted RBP15.62■□□□□ 0.09
SGCA-202ENST00000344627 ZBTB48P10074 688 aaPredicted RBP15.62■□□□□ 0.09
SGCA-202ENST00000344627 DEFB129Q9H1M3 183 aa15.62■□□□□ 0.09
SGCA-202ENST00000344627 CCER2I3L3R5 266 aa15.61■□□□□ 0.09
SGCA-202ENST00000344627 SASH1O94885 1247 aa15.61■□□□□ 0.09
SGCA-202ENST00000344627 TNFAIP1Q13829 316 aa15.61■□□□□ 0.09
SGCA-202ENST00000344627 UBE4AQ14139 1066 aa15.61■□□□□ 0.09
SGCA-202ENST00000344627 BICC1Q9H694 974 aaKnown RBP15.61■□□□□ 0.09
SGCA-202ENST00000344627 IRS2Q9Y4H2 1338 aa15.61■□□□□ 0.09
SGCA-202ENST00000344627 OTUD7BQ6GQQ9 843 aa15.6■□□□□ 0.09
SGCA-202ENST00000344627 AKAP11Q9UKA4 1901 aa15.6■□□□□ 0.09
SGCA-202ENST00000344627 CASP8AP2Q9UKL3 1982 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 SPDYE2BA6NHP3 402 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 F8W031 263 aaPredicted RBP15.59■□□□□ 0.09
SGCA-202ENST00000344627 GPR25O00155 361 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 SLC34A2O95436 690 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 SPDYE6P0CI01 402 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 ALDH1L2Q3SY69 923 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 PRAMEF18Q5VWM3 479 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 SPRYD7Q5W111 196 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 ZNF296Q8WUU4 475 aaPredicted RBP15.59■□□□□ 0.09
SGCA-202ENST00000344627 SLC10A4Q96EP9 437 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 KAZALD1Q96I82 304 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 PUS3Q9BZE2 481 aaKnown RBP15.59■□□□□ 0.09
SGCA-202ENST00000344627 ANGEL1Q9UNK9 670 aaKnown RBP15.59■□□□□ 0.09
SGCA-202ENST00000344627 JAG2Q9Y219 1238 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 FAM205AQ6ZU69 1335 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 A0A1B0GUL6 1792 aa15.59■□□□□ 0.09
SGCA-202ENST00000344627 FKTNO75072 461 aa15.58■□□□□ 0.08
SGCA-202ENST00000344627 IREB2P48200 963 aaKnown RBP15.58■□□□□ 0.08
SGCA-202ENST00000344627 PTPN12Q05209 780 aaKnown RBP15.58■□□□□ 0.08
SGCA-202ENST00000344627 CFAP100Q494V2 611 aa15.58■□□□□ 0.08
SGCA-202ENST00000344627 FBXO46Q6PJ61 603 aaPredicted RBP15.58■□□□□ 0.08
SGCA-202ENST00000344627 MOB2Q70IA6 237 aa15.58■□□□□ 0.08
SGCA-202ENST00000344627 SERPINA10Q9UK55 444 aa15.58■□□□□ 0.08
SGCA-202ENST00000344627 MROH5Q6ZUA9 1318 aa15.58■□□□□ 0.08
SGCA-202ENST00000344627 METTL24Q5JXM2 366 aa15.57■□□□□ 0.08
SGCA-202ENST00000344627 VPS37DQ86XT2 251 aa15.57■□□□□ 0.08
SGCA-202ENST00000344627 HPS5Q9UPZ3 1129 aa15.57■□□□□ 0.08
SGCA-202ENST00000344627 UTYO14607 1347 aa15.57■□□□□ 0.08
SGCA-202ENST00000344627 ZNF646O15015 1829 aaPredicted RBP15.57■□□□□ 0.08
SGCA-202ENST00000344627 TBC1D8O95759 1140 aa15.56■□□□□ 0.08
SGCA-202ENST00000344627 HIBADHP31937 336 aaKnown RBP15.56■□□□□ 0.08
SGCA-202ENST00000344627 GYG1P46976 350 aa15.56■□□□□ 0.08
SGCA-202ENST00000344627 RBM5P52756 815 aaKnown RBP eCLIP15.56■□□□□ 0.08
SGCA-202ENST00000344627 ANKRD13AQ8IZ07 590 aa15.56■□□□□ 0.08
SGCA-202ENST00000344627 CERS5Q8N5B7 392 aa15.56■□□□□ 0.08
SGCA-202ENST00000344627 TDRD7Q8NHU6 1098 aaKnown RBP15.56■□□□□ 0.08
SGCA-202ENST00000344627 TBC1D22AQ8WUA7 517 aa15.56■□□□□ 0.08
SGCA-202ENST00000344627 NOB1Q9ULX3 412 aaKnown RBP15.56■□□□□ 0.08
SGCA-202ENST00000344627 FRAT2O75474 233 aaPredicted RBP15.55■□□□□ 0.08
SGCA-202ENST00000344627 TNNI2P48788 182 aa15.55■□□□□ 0.08
SGCA-202ENST00000344627 HDLBPQ00341 1268 aaKnown RBP15.55■□□□□ 0.08
SGCA-202ENST00000344627 LRRC24Q50LG9 513 aa15.55■□□□□ 0.08
SGCA-202ENST00000344627 INTS3Q68E01 1043 aaKnown RBP15.55■□□□□ 0.08
SGCA-202ENST00000344627 TRMT2AQ8IZ69 625 aaKnown RBP15.55■□□□□ 0.08
SGCA-202ENST00000344627 ANKRD44Q8N8A2 993 aa15.55■□□□□ 0.08
SGCA-202ENST00000344627 MRIQ9BWK5 157 aa15.55■□□□□ 0.08
SGCA-202ENST00000344627 USP44Q9H0E7 712 aa15.55■□□□□ 0.08
SGCA-202ENST00000344627 RIPOR2Q9Y4F9 1068 aa15.55■□□□□ 0.08
SGCA-202ENST00000344627 CT47B1P0C2W7 299 aaPredicted RBP15.54■□□□□ 0.08
SGCA-202ENST00000344627 PRKG1Q13976 671 aa15.54■□□□□ 0.08
SGCA-202ENST00000344627 ARHGEF6Q15052 776 aa15.54■□□□□ 0.08
SGCA-202ENST00000344627 RABL6Q3YEC7 729 aaPredicted RBP15.54■□□□□ 0.08
SGCA-202ENST00000344627 CAVIN4Q5BKX8 364 aa15.54■□□□□ 0.08
SGCA-202ENST00000344627 IFNL1Q8IU54 200 aa15.54■□□□□ 0.08
SGCA-202ENST00000344627 KLHDC4Q8TBB5 520 aa15.54■□□□□ 0.08
SGCA-202ENST00000344627 HOOK2Q96ED9 719 aa15.54■□□□□ 0.08
SGCA-202ENST00000344627 PRMT6Q96LA8 375 aaPredicted RBP15.54■□□□□ 0.08
SGCA-202ENST00000344627 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.54■□□□□ 0.08
SGCA-202ENST00000344627 PCDH10Q9P2E7 1040 aa15.54■□□□□ 0.08
SGCA-202ENST00000344627 SUGT1Q9Y2Z0 365 aa15.54■□□□□ 0.08
SGCA-202ENST00000344627 KIF16BQ96L93 1317 aa15.53■□□□□ 0.08
SGCA-202ENST00000344627 UBTFL1P0CB47 393 aaPredicted RBP15.53■□□□□ 0.08
SGCA-202ENST00000344627 CHAF1AQ13111 956 aaPredicted RBP15.53■□□□□ 0.08
SGCA-202ENST00000344627 RASA3Q14644 834 aa15.53■□□□□ 0.08
SGCA-202ENST00000344627 SPDYE2Q495Y8 402 aa15.53■□□□□ 0.08
SGCA-202ENST00000344627 MFSD14BQ5SR56 506 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms