RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 CAVIN4Q5BKX8 364 aa25.05■■□□□ 1.6
CEACAM3-201ENST00000344550 CYP4F22Q6NT55 531 aa25.05■■□□□ 1.6
CEACAM3-201ENST00000344550 PAXIP1Q6ZW49 1069 aaPredicted RBP25.05■■□□□ 1.6
CEACAM3-201ENST00000344550 CDCA5Q96FF9 252 aa25.05■■□□□ 1.6
CEACAM3-201ENST00000344550 PRDM10Q9NQV6 1147 aa25.05■■□□□ 1.6
CEACAM3-201ENST00000344550 EYA2O00167 538 aa25.04■■□□□ 1.6
CEACAM3-201ENST00000344550 CIAO1O76071 339 aa25.04■■□□□ 1.6
CEACAM3-201ENST00000344550 RFX5P48382 616 aaPredicted RBP25.04■■□□□ 1.6
CEACAM3-201ENST00000344550 NOGQ13253 232 aa25.04■■□□□ 1.6
CEACAM3-201ENST00000344550 LRRC24Q50LG9 513 aa25.04■■□□□ 1.6
CEACAM3-201ENST00000344550 FBXO33Q7Z6M2 555 aa25.04■■□□□ 1.6
CEACAM3-201ENST00000344550 APOBEC3FQ8IUX4 373 aaKnown RBP25.04■■□□□ 1.6
CEACAM3-201ENST00000344550 CCDC102AQ96A19 550 aa25.04■■□□□ 1.6
CEACAM3-201ENST00000344550 ASTN2O75129 1339 aaPredicted RBP25.04■■□□□ 1.6
CEACAM3-201ENST00000344550 PTPN12Q05209 780 aaKnown RBP25.03■■□□□ 1.6
CEACAM3-201ENST00000344550 PUM3Q15397 648 aaKnown RBP25.03■■□□□ 1.6
CEACAM3-201ENST00000344550 ATF7IPQ6VMQ6 1270 aa25.03■■□□□ 1.6
CEACAM3-201ENST00000344550 CERS5Q8N5B7 392 aa25.03■■□□□ 1.6
CEACAM3-201ENST00000344550 BEGAINQ9BUH8 593 aa25.03■■□□□ 1.6
CEACAM3-201ENST00000344550 CA12O43570 354 aa25.02■■□□□ 1.6
CEACAM3-201ENST00000344550 DLGAP5Q15398 846 aa25.02■■□□□ 1.6
CEACAM3-201ENST00000344550 VPS37DQ86XT2 251 aa25.02■■□□□ 1.6
CEACAM3-201ENST00000344550 FOXN1O15353 648 aa25.01■■□□□ 1.59
CEACAM3-201ENST00000344550 IFIT1P09914 478 aaKnown RBP25.01■■□□□ 1.59
CEACAM3-201ENST00000344550 RGMBQ6NW40 437 aa25.01■■□□□ 1.59
CEACAM3-201ENST00000344550 TBC1D22AQ8WUA7 517 aa25.01■■□□□ 1.59
CEACAM3-201ENST00000344550 ZBED9Q6R2W3 1325 aa25.01■■□□□ 1.59
CEACAM3-201ENST00000344550 MYO1BO43795 1136 aa25■■□□□ 1.59
CEACAM3-201ENST00000344550 FGFR2P21802 821 aa25■■□□□ 1.59
CEACAM3-201ENST00000344550 GYG1P46976 350 aa25■■□□□ 1.59
CEACAM3-201ENST00000344550 COL13A1Q5TAT6 717 aaPredicted RBP25■■□□□ 1.59
CEACAM3-201ENST00000344550 COL1A1P02452 1464 aaPredicted RBP25■■□□□ 1.59
CEACAM3-201ENST00000344550 TRIM27P14373 513 aa24.99■■□□□ 1.59
CEACAM3-201ENST00000344550 NF2P35240 595 aa24.99■■□□□ 1.59
CEACAM3-201ENST00000344550 MFSD14BQ5SR56 506 aa24.99■■□□□ 1.59
CEACAM3-201ENST00000344550 KLHDC4Q8TBB5 520 aa24.99■■□□□ 1.59
CEACAM3-201ENST00000344550 LPIN2Q92539 896 aa24.99■■□□□ 1.59
CEACAM3-201ENST00000344550 PPP2R3BQ9Y5P8 575 aa24.99■■□□□ 1.59
CEACAM3-201ENST00000344550 ZBTB22O15209 634 aa24.98■■□□□ 1.59
CEACAM3-201ENST00000344550 MTX1Q13505 466 aa24.98■■□□□ 1.59
CEACAM3-201ENST00000344550 DLK2Q6UY11 383 aa24.98■■□□□ 1.59
CEACAM3-201ENST00000344550 REM2Q8IYK8 340 aaPredicted RBP24.98■■□□□ 1.59
CEACAM3-201ENST00000344550 MEIS3Q99687 375 aa24.98■■□□□ 1.59
CEACAM3-201ENST00000344550 COPRSQ9NQ92 184 aa24.98■■□□□ 1.59
CEACAM3-201ENST00000344550 SERPINA10Q9UK55 444 aa24.98■■□□□ 1.59
CEACAM3-201ENST00000344550 SUGT1Q9Y2Z0 365 aa24.98■■□□□ 1.59
CEACAM3-201ENST00000344550 LRRFIP2Q9Y608 721 aaKnown RBP24.98■■□□□ 1.59
CEACAM3-201ENST00000344550 IL15P40933 162 aaPredicted RBP24.97■■□□□ 1.59
CEACAM3-201ENST00000344550 HDLBPQ00341 1268 aaKnown RBP24.97■■□□□ 1.59
CEACAM3-201ENST00000344550 ZKSCAN2Q63HK3 967 aa24.97■■□□□ 1.59
CEACAM3-201ENST00000344550 ATG9AQ7Z3C6 839 aa24.97■■□□□ 1.59
CEACAM3-201ENST00000344550 MRIQ9BWK5 157 aa24.97■■□□□ 1.59
CEACAM3-201ENST00000344550 PAPPA2Q9BXP8 1791 aa24.96■■□□□ 1.59
CEACAM3-201ENST00000344550 SPDYE2BA6NHP3 402 aa24.96■■□□□ 1.59
CEACAM3-201ENST00000344550 BCAR3O75815 825 aa24.96■■□□□ 1.59
CEACAM3-201ENST00000344550 SPDYE6P0CI01 402 aa24.96■■□□□ 1.59
CEACAM3-201ENST00000344550 SLC5A1P13866 664 aa24.96■■□□□ 1.59
CEACAM3-201ENST00000344550 GRM1Q13255 1194 aa24.96■■□□□ 1.59
CEACAM3-201ENST00000344550 CEP126Q9P2H0 1117 aa24.96■■□□□ 1.59
CEACAM3-201ENST00000344550 ZNF157P51786 506 aaPredicted RBP24.95■■□□□ 1.58
CEACAM3-201ENST00000344550 CFAP100Q494V2 611 aa24.95■■□□□ 1.58
CEACAM3-201ENST00000344550 FRAT1Q92837 279 aaPredicted RBP24.95■■□□□ 1.58
CEACAM3-201ENST00000344550 FAM155AB1AL88 458 aaPredicted RBP24.94■■□□□ 1.58
CEACAM3-201ENST00000344550 AOC2O75106 756 aa24.94■■□□□ 1.58
CEACAM3-201ENST00000344550 FRAT2O75474 233 aaPredicted RBP24.94■■□□□ 1.58
CEACAM3-201ENST00000344550 TNS4Q8IZW8 715 aa24.93■■□□□ 1.58
CEACAM3-201ENST00000344550 DEFB129Q9H1M3 183 aa24.93■■□□□ 1.58
CEACAM3-201ENST00000344550 TTF2Q9UNY4 1162 aaKnown RBP24.93■■□□□ 1.58
CEACAM3-201ENST00000344550 UNCXA6NJT0 531 aa24.92■■□□□ 1.58
CEACAM3-201ENST00000344550 F8W031 263 aaPredicted RBP24.92■■□□□ 1.58
CEACAM3-201ENST00000344550 GNAI2P04899 355 aa24.92■■□□□ 1.58
CEACAM3-201ENST00000344550 SLC10A3P09131 477 aa24.92■■□□□ 1.58
CEACAM3-201ENST00000344550 HSPA8P11142 646 aaKnown RBP24.92■■□□□ 1.58
CEACAM3-201ENST00000344550 PRMT6Q96LA8 375 aaPredicted RBP24.92■■□□□ 1.58
CEACAM3-201ENST00000344550 MAST3O60307 1309 aa24.91■■□□□ 1.58
CEACAM3-201ENST00000344550 BCAMP50895 628 aa24.91■■□□□ 1.58
CEACAM3-201ENST00000344550 TNFAIP1Q13829 316 aa24.91■■□□□ 1.58
CEACAM3-201ENST00000344550 GNL3LQ9NVN8 582 aaKnown RBP24.91■■□□□ 1.58
CEACAM3-201ENST00000344550 SEMA3EO15041 775 aa24.9■■□□□ 1.58
CEACAM3-201ENST00000344550 SRGAP3O43295 1099 aa24.9■■□□□ 1.58
CEACAM3-201ENST00000344550 LBX1P52954 281 aa24.9■■□□□ 1.58
CEACAM3-201ENST00000344550 ATP2B3Q16720 1220 aa24.9■■□□□ 1.58
CEACAM3-201ENST00000344550 SUPT20HL1Q3ZLR7 823 aa24.9■■□□□ 1.58
CEACAM3-201ENST00000344550 ARMC9Q7Z3E5 817 aa24.9■■□□□ 1.58
CEACAM3-201ENST00000344550 WDR66Q8TBY9 1149 aa24.9■■□□□ 1.58
CEACAM3-201ENST00000344550 JAG2Q9Y219 1238 aa24.9■■□□□ 1.58
CEACAM3-201ENST00000344550 ARAP2Q8WZ64 1704 aa24.89■■□□□ 1.58
CEACAM3-201ENST00000344550 ECM29Q5VYK3 1845 aa24.89■■□□□ 1.58
CEACAM3-201ENST00000344550 RBM5P52756 815 aaKnown RBP eCLIP24.89■■□□□ 1.58
CEACAM3-201ENST00000344550 SIL1Q9H173 461 aa24.89■■□□□ 1.58
CEACAM3-201ENST00000344550 SAGE1Q9NXZ1 904 aa24.89■■□□□ 1.58
CEACAM3-201ENST00000344550 SPDYE2Q495Y8 402 aa24.88■■□□□ 1.57
CEACAM3-201ENST00000344550 AKAP2Q9Y2D5 859 aa24.88■■□□□ 1.57
CEACAM3-201ENST00000344550 MAP3K11Q16584 847 aa24.87■■□□□ 1.57
CEACAM3-201ENST00000344550 DZIP1LQ8IYY4 767 aaKnown RBP24.87■■□□□ 1.57
CEACAM3-201ENST00000344550 PPP1R12BO60237 982 aaPredicted RBP24.86■■□□□ 1.57
CEACAM3-201ENST00000344550 CRKP46108 304 aa24.86■■□□□ 1.57
CEACAM3-201ENST00000344550 KIF23Q02241 960 aaPredicted RBP24.86■■□□□ 1.57
CEACAM3-201ENST00000344550 CHAF1AQ13111 956 aaPredicted RBP24.86■■□□□ 1.57
CEACAM3-201ENST00000344550 TTLL12Q14166 644 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms