RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 TRIM75PA6NK02 468 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 MXRA7P84157 204 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 NCBP1Q09161 790 aaKnown RBP12.9□□□□□ -0.34
TNC-201ENST00000341037 APBB1IPQ7Z5R6 666 aaPredicted RBP12.9□□□□□ -0.34
TNC-201ENST00000341037 ARHGAP45Q92619 1136 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 SYT1P21579 422 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 TRAF1Q13077 416 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 CREB3L3Q68CJ9 461 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 JDP2Q8WYK2 163 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 PLVAPQ9BX97 442 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 DNAI1Q9UI46 699 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 UHRF1BP1LA0JNW5 1464 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 GNPATO15228 680 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 SPTLC2O15270 562 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 SYCP2Q9BX26 1530 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 AK2P54819 239 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 SREK1Q8WXA9 508 aaKnown RBP12.9□□□□□ -0.34
TNC-201ENST00000341037 MAP3K1Q13233 1512 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 SKILP12757 684 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 GPCPD1Q9NPB8 672 aa12.9□□□□□ -0.34
TNC-201ENST00000341037 SMIM23A6NLE4 172 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 CTAGE15A4D2H0 777 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 CTAGE8P0CG41 777 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 DCAF17Q5H9S7 520 aaPredicted RBP12.89□□□□□ -0.35
TNC-201ENST00000341037 CTAGE6Q86UF2 777 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 CTAGE4Q8IX94 777 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 DUOX2Q9NRD8 1548 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 PAXBP1Q9Y5B6 917 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 PLCH2O75038 1416 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 PARP1P09874 1014 aaKnown RBP12.89□□□□□ -0.35
TNC-201ENST00000341037 EIF6P56537 245 aaKnown RBP12.89□□□□□ -0.35
TNC-201ENST00000341037 TSPYL6Q8N831 410 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 SELENOSQ9BQE4 189 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 BACH1O14867 736 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 KARSQ15046 597 aaKnown RBP12.89□□□□□ -0.35
TNC-201ENST00000341037 NEK11Q8NG66 645 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 C6orf163Q5TEZ5 329 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 PODXL2Q9NZ53 605 aa12.89□□□□□ -0.35
TNC-201ENST00000341037 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 HARSP12081 509 aaKnown RBP12.88□□□□□ -0.35
TNC-201ENST00000341037 LMOD1P29536 600 aaPredicted RBP12.88□□□□□ -0.35
TNC-201ENST00000341037 CCDC186Q7Z3E2 898 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 ZNF608Q9ULD9 1512 aaPredicted RBP12.88□□□□□ -0.35
TNC-201ENST00000341037 CHMP2AO43633 222 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 TACC1O75410 805 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 KIF4AO95239 1232 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 PLCG2P16885 1265 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 PLCB3Q01970 1234 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 CEP85Q6P2H3 762 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 MBD4O95243 580 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 CTNND2Q9UQB3 1225 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 PCDH11XQ9BZA7 1347 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 PCDH11YQ9BZA8 1340 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 ZNF174Q15697 407 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 CCDC129Q6ZRS4 1044 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
TNC-201ENST00000341037 PROCA1Q8NCQ7 364 aaPredicted RBP12.88□□□□□ -0.35
TNC-201ENST00000341037 RNMTO43148 476 aaKnown RBP12.87□□□□□ -0.35
TNC-201ENST00000341037 KRT5P13647 590 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 CALML3P27482 149 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 CTAGE9A4FU28 777 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 RAPGEF1Q13905 1077 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 BIN2Q9UBW5 565 aaPredicted RBP12.87□□□□□ -0.35
TNC-201ENST00000341037 BICDL2A1A5D9 508 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 TAF12Q16514 161 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 TRAPPC3LQ5T215 181 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 DTHD1Q6ZMT9 781 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 DDX12PQ92771 950 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 NPATQ14207 1427 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 EYA3Q99504 573 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 TTC41PQ6P2S7 1318 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 UFL1O94874 794 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 BTG4Q9NY30 223 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 GUCA1BQ9UMX6 200 aa12.87□□□□□ -0.35
TNC-201ENST00000341037 B4DLN1 442 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 MRPL12P52815 198 aaKnown RBP12.86□□□□□ -0.35
TNC-201ENST00000341037 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 FLT4P35916 1363 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 PRPHP41219 470 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 BMS1Q14692 1282 aaKnown RBP12.86□□□□□ -0.35
TNC-201ENST00000341037 ZNF408Q9H9D4 720 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 CAVIN2O95810 425 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 DDX23Q9BUQ8 820 aaKnown RBP12.86□□□□□ -0.35
TNC-201ENST00000341037 RBM28Q9NW13 759 aaKnown RBP12.86□□□□□ -0.35
TNC-201ENST00000341037 SPAG1Q07617 926 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 VWA3AA6NCI4 1184 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 NDC80O14777 642 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 ZYXQ15942 572 aaKnown RBP12.86□□□□□ -0.35
TNC-201ENST00000341037 LETM2Q2VYF4 491 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 RAB3IL1Q8TBN0 382 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 ARMT1Q9H993 441 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 LZTFL1Q9NQ48 299 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.86□□□□□ -0.35
TNC-201ENST00000341037 V9GYY5 206 aaPredicted RBP12.86□□□□□ -0.35
TNC-201ENST00000341037 A2MP01023 1474 aa12.86□□□□□ -0.35
TNC-201ENST00000341037 HOXC9P31274 260 aa12.85□□□□□ -0.35
TNC-201ENST00000341037 FAM200AQ8TCP9 573 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms